Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88231 | Canola | nucleus | 85.05 | 92.75 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 7.31 | 53.66 |
| CDY71896 | Canola | nucleus | 26.58 | 46.51 |
| CDY71564 | Canola | nucleus | 46.51 | 41.3 |
| CDY70782 | Canola | nucleus | 43.19 | 40.25 |
| AT1G65300.1 | Thale cress | nucleus | 33.55 | 36.33 |
| CDY67043 | Canola | nucleus | 47.18 | 36.32 |
| CDY05333 | Canola | nucleus | 44.85 | 35.81 |
| AT5G27960.1 | Thale cress | nucleus | 37.54 | 35.31 |
| CDY05515 | Canola | nucleus | 43.85 | 35.01 |
| CDX88234 | Canola | nucleus | 20.93 | 34.43 |
| AT1G31630.1 | Thale cress | mitochondrion | 36.88 | 32.74 |
| AT1G65330.1 | Thale cress | nucleus | 30.23 | 32.62 |
| CDY05514 | Canola | nucleus | 38.87 | 32.5 |
| AT5G26650.1 | Thale cress | nucleus | 39.2 | 32.24 |
| CDX80580 | Canola | nucleus | 21.59 | 32.18 |
| CDY25744 | Canola | mitochondrion | 17.28 | 32.1 |
| CDY05540 | Canola | nucleus | 22.92 | 31.94 |
| CDY25000 | Canola | nucleus | 22.92 | 31.94 |
| AT1G59930.1 | Thale cress | cytosol | 13.95 | 31.82 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 8.97 | 31.76 |
| CDY33537 | Canola | nucleus | 20.6 | 31.63 |
| PGSC0003DMT400003073 | Potato | cytosol | 11.3 | 31.48 |
| AT5G26580.1 | Thale cress | nucleus | 35.22 | 30.72 |
| CDY64992 | Canola | mitochondrion, nucleus | 15.61 | 30.52 |
| CDY21372 | Canola | mitochondrion | 15.61 | 29.01 |
| AT5G35120.1 | Thale cress | cytosol | 10.3 | 28.97 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 14.95 | 28.85 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 17.94 | 28.42 |
| CDY04801 | Canola | mitochondrion, nucleus | 15.28 | 28.4 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 20.6 | 28.05 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 17.94 | 27.69 |
| KXG28892 | Sorghum | nucleus | 16.94 | 27.57 |
| OQU83806 | Sorghum | nucleus | 15.95 | 27.43 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 14.62 | 26.83 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 20.6 | 26.72 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 17.61 | 26.63 |
| KXG28893 | Sorghum | nucleus | 14.62 | 26.19 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 19.93 | 25.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.93 | 25.75 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 19.6 | 25.65 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 15.28 | 24.86 |
| CDY27735 | Canola | nucleus | 21.93 | 24.72 |
| CDY05207 | Canola | nucleus | 27.24 | 24.55 |
| EES10067 | Sorghum | mitochondrion | 16.61 | 24.27 |
| CDX97329 | Canola | nucleus | 23.26 | 24.14 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 19.6 | 24.08 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 14.62 | 23.91 |
| KXG32310 | Sorghum | nucleus | 18.94 | 23.55 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 18.27 | 23.5 |
| TraesCS7D01G548500.1 | Wheat | plastid | 18.27 | 23.4 |
| Os03t0582400-01 | Rice | nucleus | 19.27 | 23.29 |
| AT1G31640.1 | Thale cress | mitochondrion | 35.88 | 23.28 |
| CDY27734 | Canola | nucleus | 25.91 | 23.21 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 17.94 | 23.08 |
| Zm00001d048894_P001 | Maize | mitochondrion | 18.94 | 23.08 |
| CDY60402 | Canola | nucleus | 23.26 | 23.03 |
| OQU83804 | Sorghum | mitochondrion | 17.94 | 22.98 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 17.28 | 22.91 |
| EES06917 | Sorghum | mitochondrion, nucleus | 19.6 | 22.78 |
| KXG28888 | Sorghum | nucleus | 19.27 | 22.75 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 13.95 | 22.7 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 16.94 | 22.47 |
| KXG28889 | Sorghum | nucleus | 18.6 | 22.4 |
| KXG28890 | Sorghum | mitochondrion | 18.94 | 22.35 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 13.95 | 22.34 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 18.6 | 22.31 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 15.61 | 22.27 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 13.62 | 22.16 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 17.94 | 22.04 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 17.94 | 22.04 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 13.95 | 21.99 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 20.27 | 21.94 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 16.28 | 21.59 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 16.28 | 21.59 |
| CDY38696 | Canola | nucleus | 19.6 | 21.22 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 13.29 | 20.94 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 17.28 | 20.72 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 17.94 | 20.69 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 17.94 | 20.69 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 13.95 | 20.49 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 14.29 | 20.38 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 17.61 | 20.31 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 15.28 | 20.09 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 17.28 | 20.0 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 15.95 | 19.92 |
| Zm00001d016791_P001 | Maize | mitochondrion | 18.6 | 19.51 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 15.28 | 19.49 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 15.28 | 19.09 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 15.28 | 19.09 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 14.95 | 19.07 |
| KXG38099 | Sorghum | plastid | 19.93 | 19.05 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 15.61 | 18.95 |
| EER91288 | Sorghum | mitochondrion, nucleus | 19.27 | 18.47 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 12.96 | 18.4 |
| CDY18830 | Canola | nucleus | 20.93 | 18.31 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 14.62 | 18.26 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 13.62 | 18.06 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 13.62 | 17.01 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 16.94 | 16.61 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 8.97 | 16.56 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 16.61 | 15.97 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 15.95 | 15.34 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 15.61 | 14.6 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 14.95 | 14.56 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 16.61 | 14.04 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 14.95 | 13.93 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 14.62 | 13.62 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 13.95 | 13.55 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 16.28 | 13.5 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 12.29 | 11.14 |
| PGSC0003DMT400089615 | Potato | cytosol | 5.98 | 7.56 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078CV12 | EnsemblPlants:CDX80577 | ProteinID:CDX80577 | ProteinID:CDX80577.1 |
| ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00133701001 | InterPro:IPR002100 |
| InterPro:IPR036879 | InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF355 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0004EE5EA2 |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g28670D
Coordinates
chrLK031821:+:1431072..1432199
Molecular Weight (calculated)
34403.8 Da
IEP (calculated)
5.440
GRAVY (calculated)
-0.713
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRSRVKLSL IPDKTSRRTT FKKRKGGIMK KLNELVTLCG VEACAVVYNG PNDANPEAWP SREGAEEVIS KFMGFPKVER EKKMYDQDRY TGERIMKEQA
101: TLERVKDENR ELELKEIMFD LLKGKRMMEH HSSDARVVNE LCEFIDYNVS ELTKRIHLLQ ANGGPVSFPP LDVGAAVPTN FSGHVPYQNM MNYQEPIQNQ
201: VPDNVYDQNQ NGFNGLNQGM GLDMNHNLSE SFNQYTNLHD QPYLNQLMAQ TQQMSYAEEL ASLAAMDNNN YQLPSTSYMP SMDLSALNTN NNPWPTRFGL
301: E
101: TLERVKDENR ELELKEIMFD LLKGKRMMEH HSSDARVVNE LCEFIDYNVS ELTKRIHLLQ ANGGPVSFPP LDVGAAVPTN FSGHVPYQNM MNYQEPIQNQ
201: VPDNVYDQNQ NGFNGLNQGM GLDMNHNLSE SFNQYTNLHD QPYLNQLMAQ TQQMSYAEEL ASLAAMDNNN YQLPSTSYMP SMDLSALNTN NNPWPTRFGL
301: E
001: MKRKMKLSLI ENSVSRKTTF TKRKKGMTKK LTELVTLCGV EACAVVYSPF NSIPEAWPSR EGVEDVVSKF MELSVLDRTK KMVDQETFIS QRIAKEKEQL
101: QKLRDENHNS QIRELMFGCL KGETNVYNLD GRDLQDLSLY IDKYLNGLTR RIEILIENGE SSSSLPLPIV ANAAAPVGFD GPMFQYHNQN QQKPVQFQYQ
201: ALYDFYDQIP KKIHGFNMNM NKDSNQSMVL DLNQNLNDGE DEGIPCMDNN NYHPEIDCLA TVTTAPTDVC APNITNDL
101: QKLRDENHNS QIRELMFGCL KGETNVYNLD GRDLQDLSLY IDKYLNGLTR RIEILIENGE SSSSLPLPIV ANAAAPVGFD GPMFQYHNQN QQKPVQFQYQ
201: ALYDFYDQIP KKIHGFNMNM NKDSNQSMVL DLNQNLNDGE DEGIPCMDNN NYHPEIDCLA TVTTAPTDVC APNITNDL
Arabidopsis Description
PHE2MADS-box transcription factor PHERES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJK8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.