Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G26650.1 | Thale cress | nucleus | 94.38 | 82.51 |
| AT5G26580.1 | Thale cress | nucleus | 79.38 | 73.62 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 5.94 | 46.34 |
| AT1G59930.1 | Thale cress | cytosol | 17.5 | 42.42 |
| AT1G65300.1 | Thale cress | nucleus | 36.56 | 42.09 |
| AT5G35120.1 | Thale cress | cytosol | 13.12 | 39.25 |
| AT1G65330.1 | Thale cress | nucleus | 33.44 | 38.35 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 14.06 | 37.82 |
| CDY71896 | Canola | nucleus | 20.31 | 37.79 |
| CDX80577 | Canola | mitochondrion, nucleus | 35.31 | 37.54 |
| CDX88231 | Canola | nucleus | 31.88 | 36.96 |
| AT1G31630.1 | Thale cress | mitochondrion | 39.06 | 36.87 |
| AT5G26630.1 | Thale cress | nucleus | 23.75 | 34.86 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 37.19 | 32.69 |
| Bra020552.1-P | Field mustard | nucleus | 34.38 | 32.26 |
| CDY71564 | Canola | nucleus | 34.06 | 32.15 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 8.44 | 31.76 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 15.0 | 30.77 |
| CDY70782 | Canola | nucleus | 30.62 | 30.34 |
| Bra020550.1-P | Field mustard | nucleus | 35.0 | 29.47 |
| CDY05333 | Canola | nucleus | 34.38 | 29.18 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 20.0 | 28.96 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 20.62 | 28.7 |
| CDY67043 | Canola | nucleus | 34.69 | 28.39 |
| CDY05515 | Canola | nucleus | 33.44 | 28.38 |
| AT1G31640.1 | Thale cress | mitochondrion | 40.94 | 28.23 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 20.31 | 28.02 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 16.56 | 27.89 |
| Bra020524.1-P | Field mustard | nucleus | 31.25 | 27.78 |
| CDY05514 | Canola | nucleus | 31.25 | 27.78 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 16.88 | 27.69 |
| AT3G05860.1 | Thale cress | nucleus | 22.19 | 27.31 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 16.88 | 27.14 |
| KXG28892 | Sorghum | nucleus | 15.62 | 27.03 |
| Bra020525.1-P | Field mustard | nucleus | 33.12 | 26.84 |
| OQU83806 | Sorghum | nucleus | 14.38 | 26.29 |
| KXG28893 | Sorghum | nucleus | 13.75 | 26.19 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.06 | 26.18 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 15.0 | 26.09 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 13.12 | 25.77 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 18.44 | 25.43 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 15.0 | 25.13 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 16.56 | 25.12 |
| PGSC0003DMT400003073 | Potato | cytosol | 8.44 | 25.0 |
| AT5G48670.1 | Thale cress | nucleus | 25.0 | 24.92 |
| EES10067 | Sorghum | mitochondrion | 15.94 | 24.76 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 12.5 | 24.39 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 17.19 | 24.23 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 14.06 | 23.94 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 15.62 | 23.7 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 18.12 | 23.67 |
| TraesCS7D01G548500.1 | Wheat | plastid | 17.19 | 23.4 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 16.56 | 23.35 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 13.44 | 23.24 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 16.88 | 23.08 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 20.0 | 23.02 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 18.75 | 22.99 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 18.75 | 22.99 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 18.75 | 22.99 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 17.5 | 22.86 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 17.5 | 22.86 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 17.81 | 22.71 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 13.12 | 22.7 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 16.56 | 22.65 |
| Os03t0582400-01 | Rice | nucleus | 17.5 | 22.49 |
| KXG28889 | Sorghum | nucleus | 17.5 | 22.4 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 17.5 | 22.31 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 18.12 | 22.31 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 15.94 | 22.27 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 12.81 | 22.16 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 15.31 | 21.59 |
| KXG32310 | Sorghum | nucleus | 16.25 | 21.49 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 12.81 | 21.47 |
| Zm00001d048894_P001 | Maize | mitochondrion | 16.56 | 21.46 |
| KXG28890 | Sorghum | mitochondrion | 16.88 | 21.18 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 15.94 | 21.16 |
| OQU83804 | Sorghum | mitochondrion | 15.31 | 20.85 |
| KXG28888 | Sorghum | nucleus | 16.56 | 20.78 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 15.31 | 20.76 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 15.31 | 20.76 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 15.62 | 20.75 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 14.69 | 20.7 |
| AT2G28700.1 | Thale cress | nucleus | 21.25 | 20.67 |
| Zm00001d016791_P001 | Maize | mitochondrion | 18.44 | 20.56 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 13.12 | 20.49 |
| EES06917 | Sorghum | mitochondrion, nucleus | 16.56 | 20.46 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 15.31 | 20.33 |
| KXG38099 | Sorghum | plastid | 19.38 | 19.68 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 14.69 | 19.5 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 14.69 | 19.5 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 15.0 | 19.35 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 11.88 | 17.92 |
| EER91288 | Sorghum | mitochondrion, nucleus | 17.5 | 17.83 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 12.5 | 17.62 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 15.31 | 15.17 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 14.69 | 15.02 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 15.0 | 14.91 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 14.38 | 14.7 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 14.69 | 14.55 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 13.44 | 14.01 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 13.44 | 13.92 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 12.81 | 13.23 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 15.0 | 13.22 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 14.06 | 12.64 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 12.19 | 11.75 |
| PGSC0003DMT400089615 | Potato | cytosol | 5.0 | 6.72 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:832865 | EMBL:AC007627 | ProteinID:AED93751.1 | Symbol:AGL90 |
| ArrayExpress:AT5G27960 | EnsemblPlantsGene:AT5G27960 | RefSeq:AT5G27960 | TAIR:AT5G27960 | RefSeq:AT5G27960-TAIR-G | EnsemblPlants:AT5G27960.1 |
| TAIR:AT5G27960.1 | EMBL:AY141249 | Unigene:At.30775 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like | RefSeq:NP_198148.2 | PFAM:PF00319 |
| PO:PO:0009001 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | UniProt:Q7XJK5 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000034F27B | SEG:seg |
Description
AGL90Agamous-like MADS-box protein AGL90 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJK5]
Coordinates
chr5:-:9991685..9992770
Molecular Weight (calculated)
36731.7 Da
IEP (calculated)
7.536
GRAVY (calculated)
-0.600
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKVKLSLIA NERSRKTSFM KRKNGIFKKL HELSTLCGVQ ACALIYSPFI PVPESWPSRE GAKKVASKFL EMPRTARTRK MMDQETHLME RITKAKEQLK
101: NLAAENRELQ VRRFMFDCVE GKMSQYRYDA KDLQDLLSCM NLYLDQLNGR IESIKENGES LLSSVSPFPT RIGVDEIGDE SFSDSPIHST TRVVDTPNAT
201: NPHVLAGDMT PFLDADANAN MNQVQYQAPN NLFNQIQREF YNINLNLNLN LNSNQYLNQQ QSFMNPMVEQ HMNHVGGRES IPFVDRNYYN YNQLPAVDLA
301: STSYMPSTTD VYDPYINNNL
101: NLAAENRELQ VRRFMFDCVE GKMSQYRYDA KDLQDLLSCM NLYLDQLNGR IESIKENGES LLSSVSPFPT RIGVDEIGDE SFSDSPIHST TRVVDTPNAT
201: NPHVLAGDMT PFLDADANAN MNQVQYQAPN NLFNQIQREF YNINLNLNLN LNSNQYLNQQ QSFMNPMVEQ HMNHVGGRES IPFVDRNYYN YNQLPAVDLA
301: STSYMPSTTD VYDPYINNNL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.