Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G65330.1 | Thale cress | nucleus | 77.7 | 77.42 |
| AT1G59930.1 | Thale cress | cytosol | 24.46 | 51.52 |
| AT5G35120.1 | Thale cress | cytosol | 19.42 | 50.47 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 6.12 | 41.46 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 17.63 | 41.18 |
| CDY71896 | Canola | nucleus | 25.18 | 40.7 |
| AT5G26630.1 | Thale cress | nucleus | 31.3 | 39.91 |
| AT5G27960.1 | Thale cress | nucleus | 42.09 | 36.56 |
| AT1G31630.1 | Thale cress | mitochondrion | 43.53 | 35.69 |
| CDX80577 | Canola | mitochondrion, nucleus | 36.33 | 33.55 |
| AT5G26650.1 | Thale cress | nucleus | 43.88 | 33.33 |
| AT5G26580.1 | Thale cress | nucleus | 39.57 | 31.88 |
| CDX88231 | Canola | nucleus | 31.65 | 31.88 |
| AT3G05860.1 | Thale cress | nucleus | 29.14 | 31.15 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 9.35 | 30.59 |
| KXG28892 | Sorghum | nucleus | 19.78 | 29.73 |
| PGSC0003DMT400003073 | Potato | cytosol | 11.51 | 29.63 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 16.55 | 29.49 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 38.49 | 29.4 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 17.27 | 29.27 |
| OQU83806 | Sorghum | nucleus | 18.35 | 29.14 |
| KXG28893 | Sorghum | nucleus | 17.27 | 28.57 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 16.55 | 28.22 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 24.82 | 28.16 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 22.3 | 28.05 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 18.35 | 27.57 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 18.35 | 27.57 |
| CDY71564 | Canola | nucleus | 33.45 | 27.43 |
| Bra020552.1-P | Field mustard | nucleus | 33.45 | 27.27 |
| TraesCS7D01G548500.1 | Wheat | plastid | 23.02 | 27.23 |
| EES10067 | Sorghum | mitochondrion | 20.14 | 27.18 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 22.66 | 26.92 |
| Os03t0582400-01 | Rice | nucleus | 23.74 | 26.51 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 17.63 | 26.49 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 21.94 | 26.29 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 17.99 | 26.18 |
| AT5G48670.1 | Thale cress | nucleus | 30.22 | 26.17 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 21.94 | 26.07 |
| CDY70782 | Canola | nucleus | 29.86 | 25.7 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 16.91 | 25.54 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 21.22 | 25.43 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 22.3 | 25.31 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 22.3 | 25.31 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 17.27 | 25.26 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 20.86 | 25.22 |
| AT1G31640.1 | Thale cress | mitochondrion | 42.09 | 25.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.86 | 24.89 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 17.27 | 24.62 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 16.91 | 24.61 |
| Bra020550.1-P | Field mustard | nucleus | 33.45 | 24.47 |
| KXG28889 | Sorghum | nucleus | 21.94 | 24.4 |
| CDY67043 | Canola | nucleus | 34.17 | 24.3 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 17.27 | 24.12 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 19.78 | 24.02 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 16.19 | 23.94 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 23.74 | 23.74 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 20.5 | 23.65 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 20.5 | 23.65 |
| KXG32310 | Sorghum | nucleus | 20.5 | 23.55 |
| Zm00001d016791_P001 | Maize | mitochondrion | 24.1 | 23.34 |
| CDY05515 | Canola | nucleus | 31.65 | 23.34 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 17.63 | 23.22 |
| KXG28890 | Sorghum | mitochondrion | 21.22 | 23.14 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 20.86 | 23.11 |
| CDY05333 | Canola | nucleus | 31.3 | 23.08 |
| Zm00001d048894_P001 | Maize | mitochondrion | 20.5 | 23.08 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 19.42 | 22.88 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 19.42 | 22.88 |
| EES06917 | Sorghum | mitochondrion, nucleus | 21.22 | 22.78 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 17.27 | 22.75 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 20.14 | 22.58 |
| OQU83804 | Sorghum | mitochondrion | 19.06 | 22.55 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 18.35 | 22.47 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 16.55 | 22.44 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 20.14 | 22.31 |
| Bra020525.1-P | Field mustard | nucleus | 31.65 | 22.28 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 17.99 | 22.03 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 19.06 | 21.99 |
| KXG28888 | Sorghum | nucleus | 20.14 | 21.96 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 17.63 | 21.59 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 20.14 | 21.46 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 17.27 | 21.15 |
| Bra020524.1-P | Field mustard | nucleus | 27.34 | 21.11 |
| CDY05514 | Canola | nucleus | 27.34 | 21.11 |
| AT2G28700.1 | Thale cress | nucleus | 24.82 | 20.97 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 19.42 | 20.77 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 17.99 | 20.75 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 17.99 | 20.75 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 16.91 | 20.7 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 19.42 | 20.69 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 19.42 | 20.69 |
| KXG38099 | Sorghum | plastid | 23.02 | 20.32 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 14.75 | 19.34 |
| EER91288 | Sorghum | mitochondrion, nucleus | 20.5 | 18.15 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 18.35 | 16.5 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 17.99 | 15.97 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 17.63 | 15.65 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 17.27 | 15.48 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 16.19 | 13.93 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 15.83 | 13.62 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 16.19 | 13.55 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 15.47 | 13.35 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 14.39 | 13.03 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 16.91 | 12.95 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 15.11 | 11.8 |
| PGSC0003DMT400089615 | Potato | cytosol | 3.96 | 4.62 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:842838 | ProteinID:AAC27141.1 | ProteinID:AEE34356.1 | ArrayExpress:AT1G65300 |
| EnsemblPlantsGene:AT1G65300 | RefSeq:AT1G65300 | TAIR:AT1G65300 | RefSeq:AT1G65300-TAIR-G | EnsemblPlants:AT1G65300.1 | TAIR:AT1G65300.1 |
| EMBL:AY141245 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR036879 | InterPro:MADS_SRF-like | RefSeq:NP_176709.2 | PFAM:PF00319 | Symbol:PHE2 | PO:PO:0000423 |
| PO:PO:0009089 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | UniProt:Q7XJK8 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00001B24EB | : |
Description
PHE2MADS-box transcription factor PHERES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJK8]
Coordinates
chr1:+:24254929..24255857
Molecular Weight (calculated)
31659.8 Da
IEP (calculated)
5.225
GRAVY (calculated)
-0.551
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRKMKLSLI ENSVSRKTTF TKRKKGMTKK LTELVTLCGV EACAVVYSPF NSIPEAWPSR EGVEDVVSKF MELSVLDRTK KMVDQETFIS QRIAKEKEQL
101: QKLRDENHNS QIRELMFGCL KGETNVYNLD GRDLQDLSLY IDKYLNGLTR RIEILIENGE SSSSLPLPIV ANAAAPVGFD GPMFQYHNQN QQKPVQFQYQ
201: ALYDFYDQIP KKIHGFNMNM NKDSNQSMVL DLNQNLNDGE DEGIPCMDNN NYHPEIDCLA TVTTAPTDVC APNITNDL
101: QKLRDENHNS QIRELMFGCL KGETNVYNLD GRDLQDLSLY IDKYLNGLTR RIEILIENGE SSSSLPLPIV ANAAAPVGFD GPMFQYHNQN QQKPVQFQYQ
201: ALYDFYDQIP KKIHGFNMNM NKDSNQSMVL DLNQNLNDGE DEGIPCMDNN NYHPEIDCLA TVTTAPTDVC APNITNDL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.