Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G551000.1 | Wheat | nucleus | 92.01 | 92.01 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 44.41 | 75.14 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 52.08 | 67.63 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 50.48 | 65.56 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 48.56 | 64.41 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 37.38 | 63.24 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 47.28 | 61.41 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 44.41 | 53.26 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 42.17 | 53.23 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 36.1 | 49.78 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 29.07 | 49.46 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 6.39 | 48.78 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 31.63 | 43.61 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 29.39 | 43.4 |
| EES06917 | Sorghum | mitochondrion, nucleus | 32.59 | 39.38 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 33.55 | 37.77 |
| Zm00001d016791_P001 | Maize | mitochondrion | 33.55 | 36.59 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 22.04 | 36.32 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 33.87 | 34.53 |
| KXG38099 | Sorghum | plastid | 34.5 | 34.29 |
| EER91288 | Sorghum | mitochondrion, nucleus | 32.91 | 32.8 |
| TraesCS7D01G548500.1 | Wheat | plastid | 24.28 | 32.34 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 23.64 | 32.17 |
| KRG88863 | Soybean | mitochondrion, nucleus | 14.06 | 31.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.32 | 31.33 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 22.68 | 30.6 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 29.07 | 29.45 |
| PGSC0003DMT400086956 | Potato | nucleus | 13.74 | 29.25 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 22.04 | 29.24 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 21.41 | 28.88 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 29.71 | 28.79 |
| KRH33740 | Soybean | nucleus | 14.38 | 28.3 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 10.54 | 27.73 |
| PGSC0003DMT400089787 | Potato | cytosol | 15.34 | 27.59 |
| KRG89836 | Soybean | nucleus | 13.1 | 27.52 |
| Bra024521.1-P | Field mustard | mitochondrion | 14.06 | 27.16 |
| CDY04801 | Canola | mitochondrion, nucleus | 14.06 | 27.16 |
| CDY21372 | Canola | mitochondrion | 14.06 | 27.16 |
| CDY33537 | Canola | nucleus | 16.93 | 27.04 |
| KRH30476 | Soybean | nucleus | 12.78 | 26.67 |
| Bra012335.1-P | Field mustard | mitochondrion | 13.74 | 26.54 |
| CDY25744 | Canola | mitochondrion | 13.74 | 26.54 |
| Bra005166.1-P | Field mustard | mitochondrion, nucleus | 10.54 | 26.4 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 13.74 | 26.38 |
| KRG97962 | Soybean | nucleus | 20.13 | 26.36 |
| KRG98150 | Soybean | mitochondrion, nucleus | 14.06 | 26.35 |
| KRH30919 | Soybean | nucleus | 20.13 | 26.03 |
| KRG98143 | Soybean | nucleus | 17.25 | 25.59 |
| KRH30113 | Soybean | nucleus | 13.74 | 25.15 |
| Solyc01g102260.2.1 | Tomato | nucleus | 19.81 | 24.9 |
| KRG98149 | Soybean | nucleus | 16.93 | 24.88 |
| KRG98152 | Soybean | nucleus | 15.02 | 24.74 |
| CDY64992 | Canola | mitochondrion, nucleus | 12.14 | 24.68 |
| KRH72060 | Soybean | nucleus | 13.42 | 24.56 |
| AT5G26630.1 | Thale cress | nucleus | 16.93 | 24.31 |
| CDX80580 | Canola | nucleus | 15.34 | 23.76 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 18.53 | 23.67 |
| KRG98148 | Soybean | nucleus | 17.25 | 23.58 |
| KRH30473 | Soybean | mitochondrion, nucleus | 16.61 | 23.53 |
| CDY71896 | Canola | nucleus | 12.78 | 23.26 |
| Bra009913.1-P | Field mustard | nucleus | 15.02 | 23.15 |
| KRH30119 | Soybean | cytosol | 11.82 | 22.98 |
| CDX88234 | Canola | nucleus | 13.42 | 22.95 |
| KRH66114 | Soybean | nucleus | 14.38 | 22.73 |
| PGSC0003DMT400089454 | Potato | nucleus | 17.25 | 22.04 |
| Bra020555.1-P | Field mustard | nucleus | 15.02 | 21.76 |
| CDY05540 | Canola | nucleus | 15.02 | 21.76 |
| CDY25000 | Canola | nucleus | 15.02 | 21.76 |
| KRG98142 | Soybean | nucleus | 18.53 | 21.72 |
| KRH30472 | Soybean | nucleus | 14.7 | 21.7 |
| PGSC0003DMT400003073 | Potato | cytosol | 7.35 | 21.3 |
| KRH66052 | Soybean | mitochondrion, nucleus | 15.02 | 20.89 |
| Bra018490.1-P | Field mustard | nucleus | 19.17 | 20.69 |
| CDX97329 | Canola | nucleus | 19.17 | 20.69 |
| PGSC0003DMT400088489 | Potato | nucleus | 14.06 | 20.66 |
| KRG98147 | Soybean | mitochondrion, nucleus | 16.61 | 20.23 |
| Bra029469.1-P | Field mustard | nucleus | 19.49 | 20.07 |
| CDY60402 | Canola | nucleus | 19.49 | 20.07 |
| PGSC0003DMT400090586 | Potato | nucleus | 15.02 | 20.0 |
| PGSC0003DMT400073719 | Potato | nucleus | 15.97 | 19.16 |
| AT5G48670.1 | Thale cress | nucleus | 19.49 | 19.0 |
| KRG88915 | Soybean | mitochondrion, nucleus | 12.46 | 18.84 |
| PGSC0003DMT400095062 | Potato | nucleus | 16.93 | 18.79 |
| CDY27735 | Canola | nucleus | 15.97 | 18.73 |
| AT5G35120.1 | Thale cress | cytosol | 6.39 | 18.69 |
| AT3G05860.1 | Thale cress | nucleus | 15.34 | 18.46 |
| PGSC0003DMT400088654 | Potato | nucleus | 19.17 | 18.35 |
| AT1G65330.1 | Thale cress | nucleus | 15.97 | 17.92 |
| PGSC0003DMT400091650 | Potato | nucleus | 14.7 | 17.76 |
| AT1G65300.1 | Thale cress | nucleus | 15.65 | 17.63 |
| PGSC0003DMT400090953 | Potato | nucleus | 18.85 | 17.56 |
| KRH72066 | Soybean | mitochondrion, nucleus | 11.5 | 17.48 |
| KRH30471 | Soybean | nucleus | 16.61 | 17.16 |
| CDY38696 | Canola | nucleus | 15.02 | 16.91 |
| Bra039404.1-P | Field mustard | nucleus | 16.29 | 16.89 |
| PGSC0003DMT400095755 | Potato | nucleus | 18.53 | 16.86 |
| Bra035448.1-P | Field mustard | nucleus | 14.06 | 16.67 |
| KRG88862 | Soybean | nucleus | 16.61 | 16.61 |
| Bra035449.1-P | Field mustard | nucleus | 13.74 | 16.29 |
| PGSC0003DMT400087890 | Potato | cytosol | 5.75 | 16.07 |
| CDX80577 | Canola | mitochondrion, nucleus | 15.34 | 15.95 |
| AT1G59930.1 | Thale cress | cytosol | 6.71 | 15.91 |
| PGSC0003DMT400061726 | Potato | nucleus | 16.61 | 15.9 |
| CDY05207 | Canola | nucleus | 16.93 | 15.87 |
| PGSC0003DMT400088008 | Potato | nucleus | 9.58 | 15.54 |
| KRG88914 | Soybean | cytosol | 10.86 | 15.53 |
| CDY71564 | Canola | nucleus | 16.61 | 15.34 |
| KRG98146 | Soybean | nucleus | 15.97 | 15.24 |
| CDY18830 | Canola | nucleus | 16.61 | 15.12 |
| Bra041022.1-P | Field mustard | nucleus | 15.97 | 14.97 |
| Bra020552.1-P | Field mustard | nucleus | 16.29 | 14.96 |
| CDY27734 | Canola | nucleus | 15.97 | 14.88 |
| CDX88231 | Canola | nucleus | 13.1 | 14.86 |
| PGSC0003DMT400090516 | Potato | nucleus | 8.31 | 14.69 |
| PGSC0003DMT400077258 | Potato | nucleus | 18.21 | 14.62 |
| AT2G28700.1 | Thale cress | nucleus | 15.34 | 14.59 |
| AT5G27960.1 | Thale cress | nucleus | 14.7 | 14.38 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 17.57 | 14.36 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 15.97 | 14.33 |
| CDY70782 | Canola | nucleus | 14.7 | 14.24 |
| PGSC0003DMT400095417 | Potato | cytosol | 5.75 | 14.06 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 15.65 | 13.46 |
| AT5G26580.1 | Thale cress | nucleus | 14.7 | 13.33 |
| AT5G26650.1 | Thale cress | nucleus | 15.34 | 13.11 |
| CDY05333 | Canola | nucleus | 15.34 | 12.73 |
| PGSC0003DMT400085256 | Potato | nucleus | 15.34 | 12.7 |
| Bra040248.1-P | Field mustard | nucleus | 16.61 | 12.59 |
| AT1G31630.1 | Thale cress | mitochondrion | 13.42 | 12.39 |
| Bra020550.1-P | Field mustard | nucleus | 15.02 | 12.37 |
| CDY05515 | Canola | nucleus | 14.7 | 12.2 |
| CDY67043 | Canola | nucleus | 15.02 | 12.02 |
| Bra020525.1-P | Field mustard | nucleus | 14.7 | 11.65 |
| Bra020524.1-P | Field mustard | nucleus | 12.78 | 11.11 |
| CDY05514 | Canola | nucleus | 12.78 | 11.11 |
| PGSC0003DMT400085623 | Potato | nucleus | 7.03 | 11.0 |
| PGSC0003DMT400086919 | Potato | nucleus | 8.63 | 10.98 |
| PGSC0003DMT400086447 | Potato | cytosol | 5.75 | 9.38 |
| AT1G31640.1 | Thale cress | mitochondrion | 13.74 | 9.27 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 4.79 | 9.2 |
| PGSC0003DMT400094378 | Potato | nucleus | 4.47 | 8.97 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 7.67 | 8.51 |
| PGSC0003DMT400094113 | Potato | cytosol | 4.47 | 8.09 |
| Solyc07g043080.1.1 | Tomato | cytosol | 3.19 | 8.06 |
| PGSC0003DMT400089615 | Potato | cytosol | 4.79 | 6.3 |
| PGSC0003DMT400061722 | Potato | plastid | 1.6 | 4.81 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 1.6 | 4.27 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 2.56 | 3.98 |
| PGSC0003DMT400065010 | Potato | vacuole | 2.24 | 3.5 |
| PGSC0003DMT400091747 | Potato | plastid | 1.28 | 2.63 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 |
| InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like | PFAM:PF00319 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF153 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | EnsemblPlantsGene:TraesCS7D01G536700 |
| EnsemblPlants:TraesCS7D01G536700.1 | TIGR:cd00266 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7D:+:628400062..628401003
Molecular Weight (calculated)
33892.5 Da
IEP (calculated)
6.420
GRAVY (calculated)
-0.460
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRLPKKVTL GYVRHDSTRR SRYKQRLKGL MKKAGDLATL CDVDTCVVVY GEDGAAPEVF PSSDKAVGIL NGFKSMPELG HCKKTMDQEG LLTERIAKLQ
101: EQVDKSRREC QDRETRYLLQ QIMDGNLPGH VGLSVEQLAR VGYKVEEMIK TMGERMGKTH SQAPPPAPCV TTGSIDMGSP ALHQAPEQQQ EGTLVGGYAG
201: GHDGAGFTGG DTVMQMQSFN LEFGSSHFPP MYQAPPPAPW VTTGSVDMGS TALHQAPVQR QEGTLLSSGG DLGTLVYGGY AGGHEGAGFT VGDTMMQMQS
301: FNLEFDWSRF PPM
101: EQVDKSRREC QDRETRYLLQ QIMDGNLPGH VGLSVEQLAR VGYKVEEMIK TMGERMGKTH SQAPPPAPCV TTGSIDMGSP ALHQAPEQQQ EGTLVGGYAG
201: GHDGAGFTGG DTVMQMQSFN LEFGSSHFPP MYQAPPPAPW VTTGSVDMGS TALHQAPVQR QEGTLLSSGG DLGTLVYGGY AGGHEGAGFT VGDTMMQMQS
301: FNLEFDWSRF PPM
001: MRGKMKLSFI ENDSVRKTTF TKRKKGMLKK FNELVTLCGV DACAVIRSPY NSIQEPWPSR EGVEEVMSKF MEFSVLDRTK KMVDQETFLR QRIAKETERL
101: QKLRDENRNS QIRDLMFGCL KGEVDVSHLH GRDLLDLNVF LNKYLNGVIR RVEILKENGE SSSSVPPPIG VAPTVVDASV PIGFDGRMIQ DQNQNQQEPV
201: QFQYQALYDF YDQIPKKLHD FNMKMNIDPN QSMNLDLNDG EDEGIPCMDN NNYHPEIDCL ATVTTAPTDV CAPNIINDL
101: QKLRDENRNS QIRDLMFGCL KGEVDVSHLH GRDLLDLNVF LNKYLNGVIR RVEILKENGE SSSSVPPPIG VAPTVVDASV PIGFDGRMIQ DQNQNQQEPV
201: QFQYQALYDF YDQIPKKLHD FNMKMNIDPN QSMNLDLNDG EDEGIPCMDN NNYHPEIDCL ATVTTAPTDV CAPNIINDL
Arabidopsis Description
PHE1MADS-box transcription factor PHERES 1 [Source:UniProtKB/Swiss-Prot;Acc:O80805]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.