Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400087890 | Potato | cytosol | 50.0 | 85.71 |
| PGSC0003DMT400095417 | Potato | cytosol | 53.12 | 79.69 |
| Solyc07g043080.1.1 | Tomato | cytosol | 39.58 | 61.29 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 77.6 | 52.84 |
| PGSC0003DMT400090586 | Potato | nucleus | 57.29 | 46.81 |
| PGSC0003DMT400061726 | Potato | nucleus | 79.69 | 46.79 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 81.25 | 40.73 |
| PGSC0003DMT400065010 | Potato | vacuole | 40.1 | 38.5 |
| PGSC0003DMT400086956 | Potato | nucleus | 29.17 | 38.1 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 35.94 | 34.33 |
| PGSC0003DMT400003073 | Potato | cytosol | 15.62 | 27.78 |
| PGSC0003DMT400090516 | Potato | nucleus | 24.48 | 26.55 |
| PGSC0003DMT400089787 | Potato | cytosol | 22.92 | 25.29 |
| PGSC0003DMT400085623 | Potato | nucleus | 26.04 | 25.0 |
| PGSC0003DMT400061722 | Potato | plastid | 13.02 | 24.04 |
| PGSC0003DMT400089615 | Potato | cytosol | 28.65 | 23.11 |
| PGSC0003DMT400091747 | Potato | plastid | 17.71 | 22.37 |
| PGSC0003DMT400077258 | Potato | nucleus | 44.27 | 21.79 |
| PGSC0003DMT400088008 | Potato | nucleus | 21.88 | 21.76 |
| PGSC0003DMT400085256 | Potato | nucleus | 41.67 | 21.16 |
| PGSC0003DMT400073719 | Potato | nucleus | 26.04 | 19.16 |
| PGSC0003DMT400094378 | Potato | nucleus | 15.1 | 18.59 |
| PGSC0003DMT400089454 | Potato | nucleus | 23.44 | 18.37 |
| PGSC0003DMT400086919 | Potato | nucleus | 23.44 | 18.29 |
| PGSC0003DMT400094113 | Potato | cytosol | 16.15 | 17.92 |
| PGSC0003DMT400095062 | Potato | nucleus | 24.48 | 16.67 |
| PGSC0003DMT400088654 | Potato | nucleus | 26.04 | 15.29 |
| PGSC0003DMT400095755 | Potato | nucleus | 27.08 | 15.12 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 26.04 | 14.33 |
| PGSC0003DMT400090953 | Potato | nucleus | 25.0 | 14.29 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 7.81 | 12.82 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 10.94 | 12.8 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 11.98 | 12.43 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 11.98 | 12.43 |
| PGSC0003DMT400091650 | Potato | nucleus | 16.67 | 12.36 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 11.98 | 12.04 |
| Bra012335.1-P | Field mustard | mitochondrion | 9.9 | 11.73 |
| CDY25744 | Canola | mitochondrion | 9.9 | 11.73 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 9.38 | 11.04 |
| Os03t0582400-01 | Rice | nucleus | 13.54 | 10.44 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 9.9 | 10.33 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 11.46 | 9.95 |
| Bra024521.1-P | Field mustard | mitochondrion | 8.33 | 9.88 |
| CDY04801 | Canola | mitochondrion, nucleus | 8.33 | 9.88 |
| CDY21372 | Canola | mitochondrion | 8.33 | 9.88 |
| GSMUA_AchrUn_... | Banana | nucleus | 11.98 | 9.87 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 11.98 | 9.75 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 9.9 | 9.74 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 10.94 | 9.25 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 10.94 | 9.25 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 8.85 | 9.19 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 8.85 | 9.04 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 9.9 | 9.0 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 7.29 | 8.97 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 8.85 | 8.95 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 11.98 | 8.85 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 10.42 | 8.81 |
| EES10067 | Sorghum | mitochondrion | 9.38 | 8.74 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 10.42 | 8.73 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 10.94 | 8.71 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 10.94 | 8.57 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 10.94 | 8.57 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 10.94 | 8.57 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 8.85 | 8.54 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 10.94 | 8.47 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 8.33 | 8.38 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 10.94 | 8.37 |
| KXG28893 | Sorghum | nucleus | 7.29 | 8.33 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 10.42 | 8.3 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 10.42 | 8.3 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 9.9 | 8.19 |
| EES06917 | Sorghum | mitochondrion, nucleus | 10.94 | 8.11 |
| KXG28892 | Sorghum | nucleus | 7.81 | 8.11 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 8.85 | 8.06 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 9.9 | 8.05 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 10.94 | 8.05 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 10.94 | 8.05 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 10.94 | 8.05 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 9.38 | 7.83 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 9.38 | 7.76 |
| Zm00001d016791_P001 | Maize | mitochondrion | 11.46 | 7.67 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 8.85 | 7.49 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 8.85 | 7.49 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 9.38 | 7.47 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 9.38 | 7.47 |
| KXG32310 | Sorghum | nucleus | 9.38 | 7.44 |
| EER91288 | Sorghum | mitochondrion, nucleus | 11.98 | 7.32 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 8.85 | 7.26 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 8.85 | 7.26 |
| TraesCS7D01G548500.1 | Wheat | plastid | 8.85 | 7.23 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 10.42 | 7.19 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 9.38 | 7.17 |
| PGSC0003DMT400088489 | Potato | nucleus | 7.81 | 7.04 |
| OQU83806 | Sorghum | nucleus | 6.25 | 6.86 |
| OQU83804 | Sorghum | mitochondrion | 8.33 | 6.81 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 10.42 | 6.47 |
| KXG28889 | Sorghum | nucleus | 8.33 | 6.4 |
| KXG38099 | Sorghum | plastid | 10.42 | 6.35 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 6.77 | 6.34 |
| Zm00001d048894_P001 | Maize | mitochondrion | 7.81 | 6.07 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 9.38 | 5.86 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 9.38 | 5.81 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 9.38 | 5.75 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 9.38 | 5.57 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 9.38 | 5.57 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 8.85 | 5.43 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 9.38 | 5.42 |
| KXG28888 | Sorghum | nucleus | 6.77 | 5.1 |
| KXG28890 | Sorghum | mitochondrion | 6.77 | 5.1 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 9.38 | 4.96 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 8.85 | 4.78 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 5.21 | 4.72 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 7.29 | 4.35 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 0.52 | 1.18 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400086447 | EnsemblPlantsGene:PGSC0003DMG400036018 | ncoils:Coil | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 | PGSC:PGSC0003DMG400036018 |
| UniParc:UPI000294E282 | UniProt:M1DBS2 | MapMan:35.2 | : | : | : |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400036018]
Coordinates
chr1:-:45584595..45585173
Molecular Weight (calculated)
21297.9 Da
IEP (calculated)
5.299
GRAVY (calculated)
-0.360
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTQEKITMK RIKKIENELE KVRKENKKME YTNQMYGLLN GEEMPNSMHP EDLNDLCYVI NKNLNLINDG IKEKIHEEGS TSNAPQPTTR PIDPGGTSFD
101: MSWAPLLAPT NAPVLSEIPL LVPSIVPSGS NFERPMAPLN LVLDVTPTTI VPLTAPLMGP SSAPAQVPQF MFPLRTPPQM VRFVDLSQVS SS
101: MSWAPLLAPT NAPVLSEIPL LVPSIVPSGS NFERPMAPLN LVLDVTPTTI VPLTAPLMGP SSAPAQVPQF MFPLRTPPQM VRFVDLSQVS SS
001: MTRQKVKMTF IENETARKST FKKRKKGLLK KAQELGILCG VPIFAVVNSP YELNPEVWPS REAANQVVSQ WKTMSVMDKT KKMVNQETFL QQRITKATES
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
Arabidopsis Description
MADS-box protein AGL35 [Source:UniProtKB/TrEMBL;Acc:Q7XJK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.