CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 3
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89250
EER90862
EER91288
EER95753
EER97510
EES01631
EES06917
EES07448
EES09201
EES10067
EES16322
KXG19627
KXG23502
KXG26975
KXG28888
KXG28889
KXG28890
KXG28892
KXG28893
KXG32310
KXG37587
KXG37588
KXG38099
OQU78227
OQU83804
OQU83806
OQU93000

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31630.1	EER90862	AT1G69120.1	15805477
AT1G31630.1	EER95753	AT1G69120.1	15805477
AT1G31630.1	EER97510	AT1G69120.1	15805477
AT1G31630.1	KXG23502	AT1G69120.1	15805477
AT1G31630.1	EER89250	AT2G03710.1	15805477
AT1G31630.1	OQU93000	AT2G03710.1	15805477
AT1G31630.1	EES07448	AT2G45650.1	15805477
AT1G31630.1	KXG26975	AT2G45650.1	15805477
AT1G31630.1	EER91288	AT5G27960.1	15805477
AT1G31630.1	EES06917	AT5G27960.1	15805477
AT1G31630.1	EES10067	AT5G27960.1	15805477
AT1G31630.1	KXG28888	AT5G27960.1	15805477
AT1G31630.1	KXG28889	AT5G27960.1	15805477
AT1G31630.1	KXG28890	AT5G27960.1	15805477
AT1G31630.1	KXG28892	AT5G27960.1	15805477
AT1G31630.1	KXG28893	AT5G27960.1	15805477
AT1G31630.1	KXG32310	AT5G27960.1	15805477
AT1G31630.1	KXG38099	AT5G27960.1	15805477
AT1G31630.1	OQU83804	AT5G27960.1	15805477
AT1G31630.1	OQU83806	AT5G27960.1	15805477
AT1G31640.1	EER90862	AT1G69120.1	15805477
AT1G31640.1	EER95753	AT1G69120.1	15805477
AT1G31640.1	EER97510	AT1G69120.1	15805477
AT1G31640.1	KXG23502	AT1G69120.1	15805477
AT1G31640.1	EER89250	AT2G03710.1	15805477
AT1G31640.1	OQU93000	AT2G03710.1	15805477
AT1G31640.1	EES07448	AT2G45650.1	15805477
AT1G31640.1	KXG26975	AT2G45650.1	15805477
AT1G31640.1	EER91288	AT5G27960.1	15805477
AT1G31640.1	EES06917	AT5G27960.1	15805477
AT1G31640.1	EES10067	AT5G27960.1	15805477
AT1G31640.1	KXG28888	AT5G27960.1	15805477
AT1G31640.1	KXG28889	AT5G27960.1	15805477
AT1G31640.1	KXG28890	AT5G27960.1	15805477
AT1G31640.1	KXG28892	AT5G27960.1	15805477
AT1G31640.1	KXG28893	AT5G27960.1	15805477
AT1G31640.1	KXG32310	AT5G27960.1	15805477
AT1G31640.1	KXG38099	AT5G27960.1	15805477
AT1G31640.1	OQU83804	AT5G27960.1	15805477
AT1G31640.1	OQU83806	AT5G27960.1	15805477
AT5G27960.1	EER91288	AT1G31630.1	15805477
AT5G27960.1	EES06917	AT1G31630.1	15805477
AT5G27960.1	EES10067	AT1G31630.1	15805477
AT5G27960.1	KXG28888	AT1G31630.1	15805477
AT5G27960.1	KXG28889	AT1G31630.1	15805477
AT5G27960.1	KXG28890	AT1G31630.1	15805477
AT5G27960.1	KXG28892	AT1G31630.1	15805477
AT5G27960.1	KXG28893	AT1G31630.1	15805477
AT5G27960.1	KXG32310	AT1G31630.1	15805477
AT5G27960.1	KXG38099	AT1G31630.1	15805477
AT5G27960.1	OQU83804	AT1G31630.1	15805477
AT5G27960.1	OQU83806	AT1G31630.1	15805477
AT5G27960.1	EER91288	AT1G31640.1	15805477
AT5G27960.1	EES06917	AT1G31640.1	15805477
AT5G27960.1	EES10067	AT1G31640.1	15805477
AT5G27960.1	KXG28888	AT1G31640.1	15805477
AT5G27960.1	KXG28889	AT1G31640.1	15805477
AT5G27960.1	KXG28890	AT1G31640.1	15805477
AT5G27960.1	KXG28892	AT1G31640.1	15805477
AT5G27960.1	KXG28893	AT1G31640.1	15805477
AT5G27960.1	KXG32310	AT1G31640.1	15805477
AT5G27960.1	KXG38099	AT1G31640.1	15805477
AT5G27960.1	OQU83804	AT1G31640.1	15805477
AT5G27960.1	OQU83806	AT1G31640.1	15805477
AT5G27960.1	KXG19627	AT1G77980.1	15805477
AT5G48670.1	EES01631	AT2G41090.1	17360592
AT5G48670.1	EES09201	AT2G41090.1	17360592
AT5G48670.1	EES16322	AT2G41090.1	17360592
AT5G48670.1	OQU78227	AT2G41090.1	17360592
AT5G48670.1	EES01631	AT2G41100.1	17360592
AT5G48670.1	EES09201	AT2G41100.1	17360592
AT5G48670.1	EES16322	AT2G41100.1	17360592
AT5G48670.1	OQU78227	AT2G41100.1	17360592
AT5G48670.1	KXG37587	AT4G14640.1	17360592
AT5G48670.1	KXG37588	AT4G14640.1	17360592
AT5G48670.1	EES01631	AT5G21274.1	17360592
AT5G48670.1	EES09201	AT5G21274.1	17360592
AT5G48670.1	EES16322	AT5G21274.1	17360592
AT5G48670.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P18410_001	Banana	nucleus	10.81	68.29
TraesCS6A01G020500.1	Wheat	mitochondrion, nucleus	28.96	48.08
KXG38099	Sorghum	plastid	58.3	47.94
TraesCS3A01G312600.1	Wheat	nucleus	44.4	45.82
TraesCS3B01G159600.1	Wheat	nucleus	44.4	45.82
TraesCS6A01G359100.1	Wheat	mitochondrion	45.95	45.59
TraesCS6D01G342100.1	Wheat	mitochondrion	45.56	45.21
HORVU6Hr1G003730.1	Barley	nucleus	14.67	44.71
TraesCS6B01G391800.1	Wheat	mitochondrion	44.79	44.44
HORVU7Hr1G121600.1	Barley	nucleus	31.66	44.32
HORVU6Hr1G085570.1	Barley	mitochondrion, nucleus	44.4	44.23
EER91288	Sorghum	mitochondrion, nucleus	53.28	43.95
GSMUA_Achr3P08500_001	Banana	nucleus	39.0	43.91
TraesCS6D01G342000.1	Wheat	nucleus	39.77	42.74
TraesCS7B01G484600.1	Wheat	nucleus	27.03	42.68
HORVU6Hr1G085540.1	Barley	mitochondrion	36.68	41.48
TraesCS6D01G341700.1	Wheat	nucleus	37.84	40.66
KXG28892	Sorghum	nucleus	28.96	40.54
GSMUA_Achr2P18400_001	Banana	nucleus	36.29	40.52
TraesCS6B01G028100.1	Wheat	mitochondrion	29.34	40.43
TraesCS6B01G391600.1	Wheat	nucleus	38.22	40.41
TraesCS6B01G391700.1	Wheat	nucleus	38.22	40.41
TraesCS6D01G024000.1	Wheat	mitochondrion, nucleus	28.57	40.22
OQU83806	Sorghum	nucleus	27.03	40.0
TraesCS6A01G358900.1	Wheat	nucleus	36.29	39.83
TraesCS7B01G484000.1	Wheat	nucleus	28.19	39.46
TraesCS7D01G550500.1	Wheat	nucleus	28.19	39.46
TraesCS6B01G027900.1	Wheat	nucleus	34.36	39.21
TraesCS6D01G023800.1	Wheat	mitochondrion	33.98	38.77
GSMUA_AchrUn_...	Banana	nucleus	34.75	38.63
TraesCS6A01G020900.1	Wheat	mitochondrion	31.27	38.39
EES10067	Sorghum	mitochondrion	30.5	38.35
TraesCS7B01G484500.1	Wheat	nucleus	35.52	38.17
TraesCS7D01G551000.1	Wheat	nucleus	34.75	38.14
TraesCS6B01G028300.1	Wheat	mitochondrion	30.89	37.91
KRG88863	Soybean	mitochondrion, nucleus	20.46	37.86
TraesCS7B01G484100.1	Wheat	mitochondrion, nucleus	35.14	37.76
TraesCS7A01G559500.1	Wheat	nucleus	27.8	37.7
KXG28893	Sorghum	nucleus	24.32	37.5
TraesCS7D01G550600.1	Wheat	nucleus	34.36	36.93
TraesCS2B01G171700.1	Wheat	mitochondrion	27.03	36.65
TraesCS6D01G341800.1	Wheat	mitochondrion, nucleus	34.75	36.29
KRG89836	Soybean	nucleus	20.85	36.24
GSMUA_Achr3P24560_001	Banana	nucleus	32.05	35.78
VIT_14s0060g00300.t01	Wine grape	nucleus	32.43	35.59
KXG28890	Sorghum	mitochondrion	34.36	34.9
HORVU2Hr1G022060.1	Barley	nucleus, plastid	27.41	34.63
TraesCS2D01G128000.1	Wheat	nucleus	28.19	34.43
TraesCS6D01G024300.1	Wheat	mitochondrion	30.12	34.36
CDY33537	Canola	nucleus	25.87	34.18
KXG28888	Sorghum	nucleus	33.2	33.73
OQU83804	Sorghum	mitochondrion	30.12	33.19
KRG97962	Soybean	nucleus	30.5	33.05
AT5G27810.1	Thale cress	cytosol, nucleus, plastid	15.06	32.77
KRH30919	Soybean	nucleus	30.5	32.64
TraesCS6A01G022700.1	Wheat	mitochondrion	28.57	32.6
TraesCS7D01G536700.1	Wheat	nucleus	39.38	32.59
KXG28889	Sorghum	nucleus	31.27	32.4
GSMUA_Achr8P06150_001	Banana	nucleus	30.5	32.24
KXG32310	Sorghum	nucleus	30.12	32.23
TraesCS7A01G551000.1	Wheat	nucleus	38.61	31.95
KRH33740	Soybean	nucleus	18.92	30.82
KRH30476	Soybean	nucleus	17.76	30.67
PGSC0003DMT400089787	Potato	cytosol	20.46	30.46
Bra005166.1-P	Field mustard	mitochondrion, nucleus	14.67	30.4
Solyc01g102260.2.1	Tomato	nucleus	28.96	30.12
KRG98152	Soybean	nucleus	22.01	30.0
KRG98150	Soybean	mitochondrion, nucleus	19.3	29.94
KRH30113	Soybean	nucleus	19.69	29.82
AT5G26630.1	Thale cress	nucleus	25.1	29.82
CDY71896	Canola	nucleus	19.69	29.65
KRG98143	Soybean	nucleus	23.94	29.38
PGSC0003DMT400086956	Potato	nucleus	16.6	29.25
Bra012335.1-P	Field mustard	mitochondrion	18.15	29.01
Bra024521.1-P	Field mustard	mitochondrion	18.15	29.01
CDY04801	Canola	mitochondrion, nucleus	18.15	29.01
CDY21372	Canola	mitochondrion	18.15	29.01
CDY25744	Canola	mitochondrion	18.15	29.01
KRH30472	Soybean	nucleus	23.55	28.77
CDX80580	Canola	nucleus	22.39	28.71
KRH72060	Soybean	nucleus	18.92	28.66
TraesCS6A01G359700.1	Wheat	nucleus	25.1	28.63
CDY64992	Canola	mitochondrion, nucleus	16.99	28.57
KRH66114	Soybean	nucleus	21.62	28.28
AT1G22590.2	Thale cress	mitochondrion, nucleus	17.76	28.22
KRG98149	Soybean	nucleus	22.78	27.7
CDX88234	Canola	nucleus	19.3	27.32
Bra020555.1-P	Field mustard	nucleus	22.78	27.31
CDY05540	Canola	nucleus	22.78	27.31
CDY25000	Canola	nucleus	22.39	26.85
KRH30119	Soybean	cytosol	16.6	26.71
KRH30473	Soybean	mitochondrion, nucleus	22.78	26.7
KRH66052	Soybean	mitochondrion, nucleus	23.17	26.67
KRG98148	Soybean	nucleus	23.55	26.64
Bra009913.1-P	Field mustard	nucleus	20.46	26.11
TraesCS7B01G299400.1	Wheat	nucleus	32.43	26.01
TraesCS7D01G393000.1	Wheat	nucleus	32.05	25.7
TraesCS6D01G342700.1	Wheat	nucleus	30.12	25.24
Bra018490.1-P	Field mustard	nucleus	28.19	25.17
CDX97329	Canola	nucleus	28.19	25.17
KRG88915	Soybean	mitochondrion, nucleus	20.08	25.12
KRG98142	Soybean	nucleus	25.87	25.09
TraesCS6B01G392600.1	Wheat	nucleus	29.73	24.84
Bra029469.1-P	Field mustard	nucleus	28.57	24.34
CDY60402	Canola	nucleus	28.57	24.34
TraesCS7A01G398800.1	Wheat	nucleus	29.73	23.91
TraesCS2D01G150900.1	Wheat	mitochondrion	27.8	23.45
KRH72066	Soybean	mitochondrion, nucleus	18.53	23.3
PGSC0003DMT400089454	Potato	nucleus	22.01	23.27
CDY27735	Canola	nucleus	23.94	23.22
HORVU6Hr1G085670.1	Barley	nucleus	29.73	23.19
KRG98147	Soybean	mitochondrion, nucleus	22.78	22.96
AT5G48670.1	Thale cress	nucleus	28.19	22.74
AT1G65330.1	Thale cress	nucleus	24.32	22.58
PGSC0003DMT400088489	Potato	nucleus	18.53	22.54
AT3G05860.1	Thale cress	nucleus	22.39	22.31
PGSC0003DMT400003073	Potato	cytosol	9.27	22.22
TraesCS2B01G146100.1	Wheat	nucleus	30.89	22.04
AT1G65300.1	Thale cress	nucleus	22.78	21.22
PGSC0003DMT400090586	Potato	nucleus	18.92	20.85
Bra039404.1-P	Field mustard	nucleus	23.94	20.53
PGSC0003DMT400088654	Potato	nucleus	25.87	20.49
PGSC0003DMT400073719	Potato	nucleus	20.46	20.31
CDX88231	Canola	nucleus	21.24	19.93
AT5G35120.1	Thale cress	cytosol	8.11	19.63
CDX80577	Canola	mitochondrion, nucleus	22.78	19.6
CDY05207	Canola	nucleus	25.1	19.46
TraesCS2A01G146400.1	Wheat	mitochondrion	26.64	19.38
PGSC0003DMT400090953	Potato	nucleus	25.1	19.35
KRH30471	Soybean	nucleus	22.39	19.14
PGSC0003DMT400091650	Potato	nucleus	18.92	18.92
Bra041022.1-P	Field mustard	nucleus	24.32	18.86
PGSC0003DMT400095062	Potato	nucleus	20.46	18.79
CDY71564	Canola	nucleus	24.32	18.58
CDY27734	Canola	nucleus	23.94	18.45
CDY38696	Canola	nucleus	19.69	18.35
KRG88914	Soybean	cytosol	15.44	18.26
Bra020552.1-P	Field mustard	nucleus	23.94	18.18
PGSC0003DMT400095755	Potato	nucleus	23.94	18.02
CDY70782	Canola	nucleus	22.39	17.96
Bra035448.1-P	Field mustard	nucleus	18.15	17.8
KRG98146	Soybean	nucleus	22.39	17.68
KRG88862	Soybean	nucleus	21.24	17.57
AT1G59930.1	Thale cress	cytosol	8.88	17.42
Bra035449.1-P	Field mustard	nucleus	17.76	17.42
Bra009911.1-P	Field mustard	mitochondrion, nucleus	23.55	16.76
AT5G27960.1	Thale cress	nucleus	20.46	16.56
PGSC0003DMT400090516	Potato	nucleus	11.2	16.38
CDY18830	Canola	nucleus	21.62	16.28
AT5G26650.1	Thale cress	nucleus	22.78	16.12
PGSC0003DMT400087890	Potato	cytosol	6.95	16.07
PGSC0003DMT400088008	Potato	nucleus	11.97	16.06
PGSC0003DMT400061726	Potato	nucleus	20.08	15.9
AT5G26580.1	Thale cress	nucleus	20.85	15.65
PGSC0003DMT400077258	Potato	nucleus	23.55	15.64
AT2G28700.1	Thale cress	nucleus	19.69	15.5
PGSC0003DMT400095426	Potato	mitochondrion	20.85	15.47
CDY05333	Canola	nucleus	22.39	15.38
AT1G31630.1	Thale cress	mitochondrion	19.69	15.04
CDY05515	Canola	nucleus	21.62	14.85
CDY67043	Canola	nucleus	22.39	14.83
Bra020550.1-P	Field mustard	nucleus	21.62	14.74
PGSC0003DMT400061724	Potato	mitochondrion, nucleus	21.62	14.62
Bra020525.1-P	Field mustard	nucleus	21.62	14.18
Bra040248.1-P	Field mustard	nucleus	21.62	13.56
PGSC0003DMT400085256	Potato	nucleus	19.3	13.23
Solyc07g043080.1.1	Tomato	cytosol	6.18	12.9
PGSC0003DMT400086919	Potato	nucleus	11.97	12.6
PGSC0003DMT400085623	Potato	nucleus	9.65	12.5
PGSC0003DMT400095417	Potato	cytosol	6.18	12.5
Bra020524.1-P	Field mustard	nucleus	16.6	11.94
CDY05514	Canola	nucleus	16.6	11.94
AT1G31640.1	Thale cress	mitochondrion	20.08	11.21
PGSC0003DMT400086447	Potato	cytosol	8.11	10.94
CDY05205	Canola	cytosol, mitochondrion, nucleus	6.56	10.43
PGSC0003DMT400094113	Potato	cytosol	6.56	9.83
PGSC0003DMT400094378	Potato	nucleus	5.41	8.97
PGSC0003DMT400085114	Potato	cytosol, endoplasmic reticulum, nucleus	8.88	8.16
PGSC0003DMT400089615	Potato	cytosol	4.25	4.62
PGSC0003DMT400097522	Potato	cytosol, extracellular, mitochondrion, nucleus	1.93	4.27
PGSC0003DMT400065010	Potato	vacuole	3.09	4.0
PGSC0003DMT400061722	Potato	plastid	1.54	3.85
PGSC0003DMT400085093	Potato	extracellular, plastid, vacuole	2.7	3.48
PGSC0003DMT400091747	Potato	plastid	1.93	3.29

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	UniProt:C5XU07	ncoils:Coil	EnsemblPlants:EES06917	ProteinID:EES06917
ProteinID:EES06917.2	GO:GO:0000982	GO:GO:0000987	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045944	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879
InterPro:MADS_SRF-like	PFAM:PF00319	PRINTS:PR00404	PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF153
SMART:SM00432	EnsemblPlantsGene:SORBI_3004G168100	SUPFAM:SSF55455	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI0007F1CDE2
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:51848259..51849038

Molecular Weight (calculated)

28241.3 Da

IEP (calculated)

8.643

GRAVY (calculated)

-0.344

Length

259 amino acids

Sequence
(BLAST)

001: MARKKVTLHR IANDSTRRGT FKKRRKGLMK KASELATLCD VDTCVVVYGE GESQAEVWPD VPTAEHVLAR FKAVPELDQC KKMLDMEGFL KQRMDKLRDQ
101: LHKAQRDNRE REATLLLHDA IAGRRPGLVG LSVEEIASLG CMVESRLRGV KDAIERLQRM GQEVPAATVA QPQAPSSMPL MPAYSAGTAG DRDMTMMQVP
201: HQQAGWLVGG GDLGALVHGG FGAGTTSGAG GDMNMMMPQF GNMAVGFAWS DPGQYFHSI

Best Arabidopsis Sequence Match ( AT5G48670.1 )
(BLAST)

001: MTRKKVKLAY ISNDSSRKAT FKKRKKGLMK KVHELSTLCG ITACAIIYSP YDTNPEVWPS NSGVQRVVSE FRTLPEMDQH KKMVDQEGFL KQRIAKATET
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H

Arabidopsis Description

AGL80Agamous-like MADS-box protein AGL80 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.