Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88234 | Canola | nucleus | 90.15 | 100.0 |
| Bra020555.1-P | Field mustard | nucleus | 53.2 | 50.0 |
| AT5G26630.1 | Thale cress | nucleus | 53.2 | 49.54 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 9.85 | 48.78 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 16.26 | 38.82 |
| Bra005166.1-P | Field mustard | mitochondrion, nucleus | 22.17 | 36.0 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 24.63 | 32.05 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 24.14 | 29.88 |
| EES10067 | Sorghum | mitochondrion | 27.59 | 27.18 |
| OQU83806 | Sorghum | nucleus | 23.15 | 26.86 |
| PGSC0003DMT400003073 | Potato | cytosol | 14.29 | 26.85 |
| KXG28893 | Sorghum | nucleus | 22.17 | 26.79 |
| KXG28892 | Sorghum | nucleus | 24.14 | 26.49 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 28.57 | 26.24 |
| Bra018490.1-P | Field mustard | nucleus | 37.44 | 26.21 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 24.63 | 26.18 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 24.63 | 26.18 |
| Bra029469.1-P | Field mustard | nucleus | 38.92 | 25.99 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 23.65 | 25.95 |
| Bra012335.1-P | Field mustard | mitochondrion | 20.69 | 25.93 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 24.14 | 25.79 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 23.15 | 25.41 |
| Bra024521.1-P | Field mustard | mitochondrion | 20.2 | 25.31 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 28.57 | 25.22 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 24.14 | 25.13 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 30.54 | 24.7 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 24.14 | 24.62 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 29.56 | 24.49 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 29.56 | 24.49 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 22.17 | 24.46 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 30.05 | 24.3 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 21.67 | 23.78 |
| TraesCS7D01G548500.1 | Wheat | plastid | 27.09 | 23.4 |
| Os03t0582400-01 | Rice | nucleus | 28.57 | 23.29 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 26.6 | 23.28 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 29.56 | 22.99 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 25.62 | 22.91 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 25.62 | 22.91 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 26.6 | 22.88 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 21.18 | 22.87 |
| KXG28889 | Sorghum | nucleus | 28.08 | 22.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.11 | 22.75 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 29.06 | 22.61 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 29.06 | 22.61 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 26.6 | 22.41 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 25.12 | 22.27 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 25.62 | 22.22 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 25.62 | 22.22 |
| OQU83804 | Sorghum | mitochondrion | 25.62 | 22.13 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 24.63 | 22.03 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 26.11 | 21.99 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 25.12 | 21.98 |
| Zm00001d048894_P001 | Maize | mitochondrion | 26.6 | 21.86 |
| Bra041022.1-P | Field mustard | nucleus | 35.96 | 21.86 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 22.66 | 21.8 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 22.66 | 21.8 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 27.59 | 21.54 |
| Bra039404.1-P | Field mustard | nucleus | 32.02 | 21.52 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 25.62 | 21.22 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 29.06 | 21.22 |
| Bra035449.1-P | Field mustard | nucleus | 27.59 | 21.21 |
| Bra035448.1-P | Field mustard | nucleus | 27.59 | 21.21 |
| KXG28890 | Sorghum | mitochondrion | 26.6 | 21.18 |
| KXG28888 | Sorghum | nucleus | 26.6 | 21.18 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 23.65 | 21.15 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 24.14 | 20.76 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 24.63 | 20.75 |
| KXG32310 | Sorghum | nucleus | 24.63 | 20.66 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 25.12 | 20.56 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 20.69 | 20.49 |
| EES06917 | Sorghum | mitochondrion, nucleus | 26.11 | 20.46 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 24.14 | 20.33 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 24.14 | 20.33 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 20.69 | 19.81 |
| Zm00001d016791_P001 | Maize | mitochondrion | 27.59 | 19.51 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 33.99 | 18.96 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 21.18 | 18.94 |
| KXG38099 | Sorghum | plastid | 27.59 | 17.78 |
| Bra020552.1-P | Field mustard | nucleus | 29.56 | 17.6 |
| Bra040248.1-P | Field mustard | nucleus | 32.51 | 15.98 |
| EER91288 | Sorghum | mitochondrion, nucleus | 24.63 | 15.92 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 23.15 | 15.02 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 23.15 | 15.02 |
| Bra020525.1-P | Field mustard | nucleus | 28.57 | 14.68 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 22.17 | 14.56 |
| Bra020550.1-P | Field mustard | nucleus | 26.6 | 14.21 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 21.18 | 13.87 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 21.67 | 13.62 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 20.2 | 13.36 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 21.18 | 13.35 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 21.18 | 13.31 |
| Bra020524.1-P | Field mustard | nucleus | 22.66 | 12.78 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 19.7 | 12.05 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 20.69 | 11.8 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 19.21 | 10.74 |
| PGSC0003DMT400089615 | Potato | cytosol | 0.99 | 0.84 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EnsemblPlantsGene:Bra009913 | EnsemblPlants:Bra009913.1 | EnsemblPlants:Bra009913.1-P | GO:GO:0000982 |
| GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:M4D0B5 | InterPro:MADS_SRF-like |
| PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | SMART:SM00432 |
| SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000253F42B | SEG:seg | : |
Description
AT5G26630 (E=1e-046) | MADS-box protein (AGL35)
Coordinates
chrA06:+:18040797..18041408
Molecular Weight (calculated)
22777.5 Da
IEP (calculated)
8.897
GRAVY (calculated)
-0.509
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRNRVKMAY IENETSRKTT FRKRKGGIMK KALELSTLCD VPIAVFVQSE YNSVPEVFPP SRQAMGNMLV KWEKLSLVEK TKKMMNQEQF IQQRITKATE
101: SCKKVAKENK ELAMKEVMYD CLRGDNAPCN LDEDELRDLG GVIDQYIKGL NRRIQVLMKD HASSSTSVVP DAAAAAAAVA MPTAEMGSSS NVKDFDLNQT
201: QSE
101: SCKKVAKENK ELAMKEVMYD CLRGDNAPCN LDEDELRDLG GVIDQYIKGL NRRIQVLMKD HASSSTSVVP DAAAAAAAVA MPTAEMGSSS NVKDFDLNQT
201: QSE
001: MTRQKVKMTF IENETARKST FKKRKKGLLK KAQELGILCG VPIFAVVNSP YELNPEVWPS REAANQVVSQ WKTMSVMDKT KKMVNQETFL QQRITKATES
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
Arabidopsis Description
MADS-box protein AGL35 [Source:UniProtKB/TrEMBL;Acc:Q7XJK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.