Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035448.1-P | Field mustard | nucleus | 99.24 | 99.24 |
| CDY38696 | Canola | nucleus | 90.15 | 85.61 |
| Bra005166.1-P | Field mustard | mitochondrion, nucleus | 22.73 | 48.0 |
| AT2G28700.1 | Thale cress | nucleus | 48.11 | 38.6 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 5.68 | 36.59 |
| Bra039404.1-P | Field mustard | nucleus | 35.61 | 31.13 |
| Bra040248.1-P | Field mustard | nucleus | 46.21 | 29.54 |
| Bra009913.1-P | Field mustard | nucleus | 21.21 | 27.59 |
| Bra020555.1-P | Field mustard | nucleus | 21.59 | 26.39 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 8.33 | 25.88 |
| PGSC0003DMT400003073 | Potato | cytosol | 10.23 | 25.0 |
| Bra018490.1-P | Field mustard | nucleus | 26.89 | 24.48 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 14.39 | 24.36 |
| Bra029469.1-P | Field mustard | nucleus | 27.65 | 24.01 |
| KXG28892 | Sorghum | nucleus | 16.67 | 23.78 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 19.7 | 23.53 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 14.39 | 23.17 |
| OQU83806 | Sorghum | nucleus | 15.15 | 22.86 |
| Bra024521.1-P | Field mustard | mitochondrion | 14.02 | 22.84 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 16.29 | 22.63 |
| EES10067 | Sorghum | mitochondrion | 17.42 | 22.33 |
| Bra012335.1-P | Field mustard | mitochondrion | 13.64 | 22.22 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 15.53 | 22.16 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 15.53 | 22.16 |
| KXG28893 | Sorghum | nucleus | 14.02 | 22.02 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 19.32 | 21.98 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 15.15 | 21.62 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 16.29 | 21.61 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 18.94 | 21.55 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 15.91 | 21.54 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 18.56 | 21.3 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 19.7 | 21.22 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 15.15 | 20.94 |
| TraesCS7D01G548500.1 | Wheat | plastid | 18.56 | 20.85 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 18.56 | 20.76 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.18 | 20.6 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 18.56 | 20.33 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 18.56 | 20.33 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 14.02 | 20.11 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 17.8 | 20.09 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 17.8 | 20.09 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 15.53 | 20.0 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 18.94 | 19.92 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 17.05 | 19.82 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 17.05 | 19.82 |
| OQU83804 | Sorghum | mitochondrion | 17.42 | 19.57 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 16.67 | 19.38 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 15.53 | 19.34 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 18.18 | 19.12 |
| KXG32310 | Sorghum | nucleus | 17.42 | 19.01 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 16.29 | 18.94 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 16.29 | 18.94 |
| Os03t0582400-01 | Rice | nucleus | 17.8 | 18.88 |
| Bra041022.1-P | Field mustard | nucleus | 23.86 | 18.86 |
| Zm00001d048894_P001 | Maize | mitochondrion | 17.42 | 18.62 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 14.77 | 18.48 |
| KXG28890 | Sorghum | mitochondrion | 17.8 | 18.43 |
| KXG28889 | Sorghum | nucleus | 17.42 | 18.4 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 18.18 | 18.39 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 18.18 | 18.39 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 15.91 | 18.34 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 16.67 | 18.26 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 16.67 | 18.26 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 16.29 | 18.22 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 17.05 | 18.15 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 14.39 | 18.01 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 18.94 | 17.99 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 16.67 | 17.96 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 16.67 | 17.96 |
| EES06917 | Sorghum | mitochondrion, nucleus | 17.42 | 17.76 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 17.42 | 17.69 |
| KXG28888 | Sorghum | nucleus | 17.05 | 17.65 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 17.42 | 17.62 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 12.5 | 17.55 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 12.5 | 17.28 |
| Zm00001d016791_P001 | Maize | mitochondrion | 18.56 | 17.07 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 15.53 | 17.01 |
| Bra020552.1-P | Field mustard | nucleus | 20.83 | 16.13 |
| KXG38099 | Sorghum | plastid | 18.94 | 15.87 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 20.83 | 15.11 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 18.18 | 14.86 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 17.8 | 14.6 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 17.05 | 14.38 |
| EER91288 | Sorghum | mitochondrion, nucleus | 17.05 | 14.33 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 17.42 | 14.24 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 16.67 | 14.24 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 16.67 | 14.19 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 17.42 | 13.86 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 16.29 | 13.74 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 15.91 | 13.68 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 17.8 | 13.2 |
| Bra020550.1-P | Field mustard | nucleus | 18.94 | 13.16 |
| Bra020525.1-P | Field mustard | nucleus | 19.32 | 12.91 |
| Bra020524.1-P | Field mustard | nucleus | 16.67 | 12.22 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 15.91 | 11.57 |
| PGSC0003DMT400089615 | Potato | cytosol | 2.65 | 2.94 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EnsemblPlantsGene:Bra035449 | EnsemblPlants:Bra035449.1 | EnsemblPlants:Bra035449.1-P | ncoils:Coil |
| GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:M4F2Z9 |
| InterPro:MADS_SRF-like | PFAM:PF00319 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 | SMART:SM00432 |
| SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00025448CD | : | : |
Description
AT2G28700 (E=5e-049) AGL46 | AGL46 (AGAMOUS-LIKE 46); DNA binding / transcription factor
Coordinates
chrA01:-:16128063..16128987
Molecular Weight (calculated)
30798.6 Da
IEP (calculated)
6.111
GRAVY (calculated)
-0.678
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKKMDLTY ITDGKAREAT LNLRKEELKQ KLYELHVLCD VDTCAVIYNQ YDPNPEVWQS TSEVKSVFEK FEMLSEKEKT CRSVNHEEFL HQMIEKARRK
101: RQKLNDQNKE KYMRELMFAF LSGNMEDLSL NNDDHSELCS FIDQYLKQLV HHKNQTLNNP KFEIGKSSSM ALDMNIAQTS IAEAGSSSFL VSKPPRSSEL
201: TKMWKSVIFS YRSDLPHDNF VTSILSTSSN EEVYIPVMNH GFVEEMMKIG EQTGFPWMED NNRF
101: RQKLNDQNKE KYMRELMFAF LSGNMEDLSL NNDDHSELCS FIDQYLKQLV HHKNQTLNNP KFEIGKSSSM ALDMNIAQTS IAEAGSSSFL VSKPPRSSEL
201: TKMWKSVIFS YRSDLPHDNF VTSILSTSSN EEVYIPVMNH GFVEEMMKIG EQTGFPWMED NNRF
001: MARKKLNLTY IFNDRMRKRS FKQRREGFLK KLNDLKVLCD VNACAVVYNP FNSNPDVWPS KSEVNNIIKK FEMLPETQKK VKSVNHEEFL NLYISKVEKQ
101: SKKLIVENKE TCLKEVMFKC LGGNMGDFVM NDNDRLDLCK FIDHYLRNLY HHKNVTLNNP NFEIGESSSL MDMAPTATTG NMATTVVDEG MTPLLIAEGS
201: SSSFLNSPLF NSPQLTNELQ LIVSQNHRLE NSLASNLFFS EGQDICIPDM NQSIIPSNQG AEHVDFLESN FLPNNNQEVY IPVMDQDEVY NPNQNHYENQ
301: QGFIDEMMKY AEKTSFPWMV ENHCYNHNQ
101: SKKLIVENKE TCLKEVMFKC LGGNMGDFVM NDNDRLDLCK FIDHYLRNLY HHKNVTLNNP NFEIGESSSL MDMAPTATTG NMATTVVDEG MTPLLIAEGS
201: SSSFLNSPLF NSPQLTNELQ LIVSQNHRLE NSLASNLFFS EGQDICIPDM NQSIIPSNQG AEHVDFLESN FLPNNNQEVY IPVMDQDEVY NPNQNHYENQ
301: QGFIDEMMKY AEKTSFPWMV ENHCYNHNQ
Arabidopsis Description
AGL46AGAMOUS-like 46 [Source:UniProtKB/TrEMBL;Acc:F4IIT6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.