Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 93.36 | 93.36 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 92.12 | 92.12 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 86.72 | 88.56 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 52.7 | 77.44 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 58.92 | 76.76 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 61.0 | 60.0 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 61.0 | 60.0 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 9.54 | 56.1 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 60.58 | 55.94 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 45.64 | 52.13 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 53.94 | 51.79 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 39.42 | 50.53 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 43.15 | 45.81 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 34.02 | 42.93 |
| EES06917 | Sorghum | mitochondrion, nucleus | 38.17 | 35.52 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 40.25 | 34.89 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 45.23 | 33.75 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 22.41 | 33.13 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 26.56 | 32.82 |
| Zm00001d016791_P001 | Maize | mitochondrion | 38.17 | 32.06 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 29.46 | 30.87 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 29.46 | 30.6 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 39.0 | 30.32 |
| KXG38099 | Sorghum | plastid | 39.42 | 30.16 |
| KRG88863 | Soybean | mitochondrion, nucleus | 17.43 | 30.0 |
| Bra012335.1-P | Field mustard | mitochondrion | 19.92 | 29.63 |
| CDY25744 | Canola | mitochondrion | 19.92 | 29.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.22 | 29.18 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 27.39 | 28.45 |
| Bra024521.1-P | Field mustard | mitochondrion | 19.09 | 28.4 |
| CDY04801 | Canola | mitochondrion, nucleus | 19.09 | 28.4 |
| CDY21372 | Canola | mitochondrion | 19.09 | 28.4 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 27.8 | 28.39 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 27.39 | 28.21 |
| EER91288 | Sorghum | mitochondrion, nucleus | 36.1 | 27.71 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 40.66 | 27.0 |
| KRG89836 | Soybean | nucleus | 16.6 | 26.85 |
| PGSC0003DMT400086956 | Potato | nucleus | 16.18 | 26.53 |
| Bra005166.1-P | Field mustard | mitochondrion, nucleus | 13.69 | 26.4 |
| KRH30113 | Soybean | nucleus | 18.67 | 26.32 |
| CDY64992 | Canola | mitochondrion, nucleus | 16.6 | 25.97 |
| KRH33740 | Soybean | nucleus | 17.01 | 25.79 |
| KRH72060 | Soybean | nucleus | 18.26 | 25.73 |
| KRG98143 | Soybean | nucleus | 22.41 | 25.59 |
| PGSC0003DMT400089787 | Potato | cytosol | 18.26 | 25.29 |
| CDX80580 | Canola | nucleus | 21.16 | 25.25 |
| CDY33537 | Canola | nucleus | 20.33 | 25.0 |
| Solyc01g102260.2.1 | Tomato | nucleus | 25.73 | 24.9 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 25.31 | 24.9 |
| KRH30476 | Soybean | nucleus | 15.35 | 24.67 |
| CDX88234 | Canola | nucleus | 18.67 | 24.59 |
| Bra009913.1-P | Field mustard | nucleus | 20.33 | 24.14 |
| KRG98148 | Soybean | nucleus | 22.82 | 24.02 |
| KRH30919 | Soybean | nucleus | 24.07 | 23.97 |
| KRG98150 | Soybean | mitochondrion, nucleus | 16.6 | 23.95 |
| KRG97962 | Soybean | nucleus | 23.65 | 23.85 |
| KRG98152 | Soybean | nucleus | 18.67 | 23.68 |
| KRH66052 | Soybean | mitochondrion, nucleus | 21.58 | 23.11 |
| KRG98149 | Soybean | nucleus | 20.33 | 23.0 |
| AT5G26630.1 | Thale cress | nucleus | 20.75 | 22.94 |
| KRG88915 | Soybean | mitochondrion, nucleus | 18.26 | 21.26 |
| KRH30472 | Soybean | nucleus | 18.67 | 21.23 |
| KRH66114 | Soybean | nucleus | 17.43 | 21.21 |
| KRH30119 | Soybean | cytosol | 14.11 | 21.12 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 10.37 | 21.01 |
| AT3G05860.1 | Thale cress | nucleus | 22.41 | 20.77 |
| KRG98142 | Soybean | nucleus | 22.82 | 20.6 |
| PGSC0003DMT400003073 | Potato | cytosol | 9.13 | 20.37 |
| CDY71896 | Canola | nucleus | 14.52 | 20.35 |
| KRH30473 | Soybean | mitochondrion, nucleus | 18.26 | 19.91 |
| CDY27735 | Canola | nucleus | 21.99 | 19.85 |
| PGSC0003DMT400095062 | Potato | nucleus | 22.82 | 19.5 |
| KRH72066 | Soybean | mitochondrion, nucleus | 16.6 | 19.42 |
| PGSC0003DMT400073719 | Potato | nucleus | 20.75 | 19.16 |
| KRG98147 | Soybean | mitochondrion, nucleus | 20.33 | 19.07 |
| Bra020555.1-P | Field mustard | nucleus | 17.01 | 18.98 |
| CDY05540 | Canola | nucleus | 17.01 | 18.98 |
| CDY25000 | Canola | nucleus | 17.01 | 18.98 |
| PGSC0003DMT400088489 | Potato | nucleus | 16.6 | 18.78 |
| Bra029469.1-P | Field mustard | nucleus | 23.24 | 18.42 |
| CDY60402 | Canola | nucleus | 23.24 | 18.42 |
| PGSC0003DMT400090586 | Potato | nucleus | 17.84 | 18.3 |
| Bra018490.1-P | Field mustard | nucleus | 21.99 | 18.28 |
| CDX97329 | Canola | nucleus | 21.99 | 18.28 |
| AT1G65300.1 | Thale cress | nucleus | 20.75 | 17.99 |
| PGSC0003DMT400089454 | Potato | nucleus | 18.26 | 17.96 |
| Bra039404.1-P | Field mustard | nucleus | 22.41 | 17.88 |
| AT5G35120.1 | Thale cress | cytosol | 7.88 | 17.76 |
| CDY38696 | Canola | nucleus | 19.92 | 17.27 |
| AT5G48670.1 | Thale cress | nucleus | 22.82 | 17.13 |
| Bra035448.1-P | Field mustard | nucleus | 18.67 | 17.05 |
| KRH30471 | Soybean | nucleus | 21.16 | 16.83 |
| PGSC0003DMT400088654 | Potato | nucleus | 22.82 | 16.82 |
| Bra035449.1-P | Field mustard | nucleus | 18.26 | 16.67 |
| AT1G65330.1 | Thale cress | nucleus | 19.09 | 16.49 |
| PGSC0003DMT400090953 | Potato | nucleus | 22.82 | 16.37 |
| KRG88862 | Soybean | nucleus | 21.16 | 16.29 |
| PGSC0003DMT400091650 | Potato | nucleus | 17.43 | 16.22 |
| CDY27734 | Canola | nucleus | 22.41 | 16.07 |
| Bra041022.1-P | Field mustard | nucleus | 21.99 | 15.87 |
| CDY05207 | Canola | nucleus | 21.58 | 15.57 |
| PGSC0003DMT400095755 | Potato | nucleus | 21.99 | 15.41 |
| PGSC0003DMT400087890 | Potato | cytosol | 7.05 | 15.18 |
| AT1G59930.1 | Thale cress | cytosol | 8.3 | 15.15 |
| PGSC0003DMT400088008 | Potato | nucleus | 12.03 | 15.03 |
| PGSC0003DMT400061726 | Potato | nucleus | 20.33 | 14.98 |
| AT2G28700.1 | Thale cress | nucleus | 20.33 | 14.89 |
| AT5G27960.1 | Thale cress | nucleus | 19.5 | 14.69 |
| KRG98146 | Soybean | nucleus | 19.92 | 14.63 |
| CDX80577 | Canola | mitochondrion, nucleus | 18.26 | 14.62 |
| KRG88914 | Soybean | cytosol | 13.28 | 14.61 |
| CDY18830 | Canola | nucleus | 20.75 | 14.53 |
| CDX88231 | Canola | nucleus | 16.18 | 14.13 |
| PGSC0003DMT400090516 | Potato | nucleus | 10.37 | 14.12 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 20.33 | 14.04 |
| PGSC0003DMT400077258 | Potato | nucleus | 22.41 | 13.85 |
| AT5G26650.1 | Thale cress | nucleus | 20.33 | 13.39 |
| AT5G26580.1 | Thale cress | nucleus | 19.09 | 13.33 |
| PGSC0003DMT400095417 | Potato | cytosol | 7.05 | 13.28 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 20.75 | 13.05 |
| CDY71564 | Canola | nucleus | 17.84 | 12.68 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 19.09 | 12.64 |
| AT1G31630.1 | Thale cress | mitochondrion | 17.43 | 12.39 |
| Bra020552.1-P | Field mustard | nucleus | 17.43 | 12.32 |
| Bra040248.1-P | Field mustard | nucleus | 20.75 | 12.11 |
| PGSC0003DMT400085256 | Potato | nucleus | 18.67 | 11.9 |
| CDY70782 | Canola | nucleus | 15.35 | 11.46 |
| CDY05333 | Canola | nucleus | 17.84 | 11.41 |
| Bra020550.1-P | Field mustard | nucleus | 17.84 | 11.32 |
| CDY05515 | Canola | nucleus | 17.43 | 11.14 |
| CDY67043 | Canola | nucleus | 17.84 | 11.0 |
| PGSC0003DMT400086919 | Potato | nucleus | 10.79 | 10.57 |
| PGSC0003DMT400085623 | Potato | nucleus | 8.71 | 10.5 |
| Bra020525.1-P | Field mustard | nucleus | 17.01 | 10.38 |
| AT1G31640.1 | Thale cress | mitochondrion | 19.92 | 10.34 |
| PGSC0003DMT400094378 | Potato | nucleus | 6.64 | 10.26 |
| Bra020524.1-P | Field mustard | nucleus | 14.11 | 9.44 |
| CDY05514 | Canola | nucleus | 14.11 | 9.44 |
| PGSC0003DMT400086447 | Potato | cytosol | 7.47 | 9.38 |
| PGSC0003DMT400094113 | Potato | cytosol | 6.64 | 9.25 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 6.22 | 9.2 |
| Solyc07g043080.1.1 | Tomato | cytosol | 4.15 | 8.06 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 8.71 | 7.45 |
| PGSC0003DMT400089615 | Potato | cytosol | 4.98 | 5.04 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 2.07 | 4.27 |
| PGSC0003DMT400061722 | Potato | plastid | 1.66 | 3.85 |
| PGSC0003DMT400091747 | Potato | plastid | 2.07 | 3.29 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 2.49 | 2.99 |
| PGSC0003DMT400065010 | Potato | vacuole | 2.07 | 2.5 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR036879 | InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF153 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | EnsemblPlantsGene:TraesCS7B01G484500 |
| EnsemblPlants:TraesCS7B01G484500.1 | TIGR:cd00266 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:741587578..741588303
Molecular Weight (calculated)
26633.6 Da
IEP (calculated)
9.552
GRAVY (calculated)
-0.347
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MARKKVARKA TLQYIPHDST RRNRFKKRLK GLMKKADELA VLCDAKTCVL VYEEGKAAPE VFPSQAEAVG IMNQFKSMPE LVQCKEVMNQ KGFISKRIDK
101: LRAQVDKTHR ECEDGKIRSL LHKTMHGDLS GLVGLNIEEL TKVGYKVDVL LKSISERMSK IHSQTPPLAP CVATGSIDIG SPALYPAPPQ QESRLDMVSS
201: GGDLDTLVYG GYAGANFSSS DMMMRMQSFD MGFGSSPFPP M
101: LRAQVDKTHR ECEDGKIRSL LHKTMHGDLS GLVGLNIEEL TKVGYKVDVL LKSISERMSK IHSQTPPLAP CVATGSIDIG SPALYPAPPQ QESRLDMVSS
201: GGDLDTLVYG GYAGANFSSS DMMMRMQSFD MGFGSSPFPP M
001: MTRKKLNLSY ITNESMRKAT FNKRKKGLVK KIHELSVLCG IEACAVIYSP FNSNPEVWPS NSEVKNVMEN FEMLTKLEQE KKMVSHEGFI RQNISKTMES
101: NNKKMIDNAE RTMKEAMFQL LSGKGEKLNL TDRNREDLCK YIDQYLKELY HHKNKTINQS HIEPGESSGA TNAMTPTSVV EPIISSIQRP NQNPNFNHLS
201: HNQYQYQQQF GYPILVQDGI YNPSQIQNQH EEWLDDHMMN HSKEISHPLM DDNNFYYQQP
101: NNKKMIDNAE RTMKEAMFQL LSGKGEKLNL TDRNREDLCK YIDQYLKELY HHKNKTINQS HIEPGESSGA TNAMTPTSVV EPIISSIQRP NQNPNFNHLS
201: HNQYQYQQQF GYPILVQDGI YNPSQIQNQH EEWLDDHMMN HSKEISHPLM DDNNFYYQQP
Arabidopsis Description
MADS-box transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4J9K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.