Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG98152 | Soybean | nucleus | 89.44 | 75.79 |
| KRG89836 | Soybean | nucleus | 46.58 | 50.34 |
| KRG98149 | Soybean | nucleus | 63.35 | 47.89 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 33.54 | 45.38 |
| KRH66114 | Soybean | nucleus | 50.93 | 41.41 |
| KRH72060 | Soybean | nucleus | 43.48 | 40.94 |
| KRH30113 | Soybean | nucleus | 42.24 | 39.77 |
| KRG88863 | Soybean | mitochondrion, nucleus | 34.16 | 39.29 |
| KRG98150 | Soybean | mitochondrion, nucleus | 39.75 | 38.32 |
| KRG97962 | Soybean | nucleus | 53.42 | 35.98 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 51.55 | 35.17 |
| KRH30919 | Soybean | nucleus | 52.8 | 35.12 |
| CDY33537 | Canola | nucleus | 42.24 | 34.69 |
| KRH33740 | Soybean | nucleus | 33.54 | 33.96 |
| KRH66052 | Soybean | mitochondrion, nucleus | 45.34 | 32.44 |
| Solyc01g102260.2.1 | Tomato | nucleus | 49.69 | 32.13 |
| KRH30473 | Soybean | mitochondrion, nucleus | 42.24 | 30.77 |
| KRG88914 | Soybean | cytosol | 41.61 | 30.59 |
| KRG88915 | Soybean | mitochondrion, nucleus | 39.13 | 30.43 |
| KRG98147 | Soybean | mitochondrion, nucleus | 45.34 | 28.4 |
| KRH72066 | Soybean | mitochondrion, nucleus | 36.02 | 28.16 |
| KRG98148 | Soybean | nucleus | 39.75 | 27.95 |
| KRH30472 | Soybean | nucleus | 36.65 | 27.83 |
| KRG98143 | Soybean | nucleus | 34.78 | 26.54 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 24.22 | 25.0 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 34.16 | 24.89 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 34.78 | 24.35 |
| Bra018490.1-P | Field mustard | nucleus | 43.48 | 24.14 |
| CDX97329 | Canola | nucleus | 43.48 | 24.14 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 34.78 | 24.14 |
| KRH30476 | Soybean | nucleus | 22.36 | 24.0 |
| KRG98142 | Soybean | nucleus | 39.75 | 23.97 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 24.22 | 23.78 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 27.95 | 23.68 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 12.42 | 23.53 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 27.95 | 23.08 |
| Bra029469.1-P | Field mustard | nucleus | 42.86 | 22.7 |
| CDY60402 | Canola | nucleus | 42.86 | 22.7 |
| KRH30471 | Soybean | nucleus | 41.61 | 22.11 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 27.33 | 22.11 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 31.68 | 21.98 |
| AT5G48670.1 | Thale cress | nucleus | 42.86 | 21.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.06 | 21.46 |
| KXG28893 | Sorghum | nucleus | 22.36 | 21.43 |
| KRG88862 | Soybean | nucleus | 40.37 | 20.77 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 24.22 | 20.74 |
| KXG28892 | Sorghum | nucleus | 23.6 | 20.54 |
| KRG98146 | Soybean | nucleus | 41.61 | 20.43 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 22.98 | 20.11 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 30.43 | 20.0 |
| OQU83806 | Sorghum | nucleus | 21.74 | 20.0 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 22.98 | 20.0 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 23.6 | 19.9 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 22.36 | 19.46 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 22.36 | 19.46 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 25.47 | 19.43 |
| EES10067 | Sorghum | mitochondrion | 24.84 | 19.42 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 29.19 | 18.73 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 26.09 | 18.5 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 26.09 | 18.5 |
| Os03t0582400-01 | Rice | nucleus | 27.95 | 18.07 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 23.6 | 18.01 |
| TraesCS7D01G548500.1 | Wheat | plastid | 26.09 | 17.87 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 25.47 | 17.52 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 25.47 | 17.52 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 25.47 | 17.37 |
| CDY05207 | Canola | nucleus | 36.02 | 17.37 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 27.95 | 17.31 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 29.81 | 17.27 |
| CDY27734 | Canola | nucleus | 36.02 | 17.26 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 27.95 | 17.24 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 26.71 | 17.13 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 4.35 | 17.07 |
| Bra041022.1-P | Field mustard | nucleus | 35.4 | 17.07 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 25.47 | 17.01 |
| KXG32310 | Sorghum | nucleus | 25.47 | 16.94 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 27.33 | 16.86 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 27.33 | 16.86 |
| EES06917 | Sorghum | mitochondrion, nucleus | 26.71 | 16.6 |
| OQU83804 | Sorghum | mitochondrion | 24.22 | 16.6 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 24.84 | 16.33 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 24.84 | 16.33 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 22.98 | 16.3 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 19.25 | 16.23 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 24.22 | 16.18 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 22.98 | 16.16 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 23.6 | 16.1 |
| Zm00001d016791_P001 | Maize | mitochondrion | 28.57 | 16.03 |
| KXG28889 | Sorghum | nucleus | 24.84 | 16.0 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 22.36 | 15.86 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 22.36 | 15.86 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 24.22 | 15.73 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 22.98 | 15.35 |
| KXG28888 | Sorghum | nucleus | 24.22 | 15.29 |
| KXG28890 | Sorghum | mitochondrion | 24.22 | 15.29 |
| KXG38099 | Sorghum | plastid | 29.81 | 15.24 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 19.25 | 15.12 |
| Zm00001d048894_P001 | Maize | mitochondrion | 22.36 | 14.57 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 21.74 | 14.52 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 21.12 | 14.11 |
| EER91288 | Sorghum | mitochondrion, nucleus | 26.71 | 13.69 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 18.01 | 13.68 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 24.22 | 12.46 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 22.98 | 11.82 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 23.6 | 11.8 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 22.36 | 11.65 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 21.74 | 10.84 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 21.74 | 10.84 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 20.5 | 10.65 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 19.25 | 10.1 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 20.5 | 9.94 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 19.88 | 8.82 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 19.25 | 8.71 |
Protein Annotations
| EntrezGene:100785964 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02006875 | EnsemblPlantsGene:GLYMA_11G160200 | GO:GO:0000982 |
| GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | UniProt:I1LLJ1 | InterPro:IPR002100 | InterPro:IPR036879 | EnsemblPlants:KRH30119 |
| ProteinID:KRH30119 | ProteinID:KRH30119.1 | InterPro:MADS_SRF-like | PFAM:PF00319 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 |
| SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00023CBE05 | : | : |
Description
hypothetical protein
Coordinates
chr11:+:14663706..14664922
Molecular Weight (calculated)
18697.8 Da
IEP (calculated)
7.512
GRAVY (calculated)
-0.650
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKMNEISTL CGIETCAIIY SPNDPQPEVW PSDSGVQRVL SRFMEMPEVR QSRKMLNQES FLRQMITKGQ QQLTRQRNEN RKKEMTNLML QYLTAGKVVG
101: NPSLVDLNDL SWLIDQNLNE IEKKITMLQI QEVVIPVIEN EGHMNHVQGL ESNMDTKKKQ H
101: NPSLVDLNDL SWLIDQNLNE IEKKITMLQI QEVVIPVIEN EGHMNHVQGL ESNMDTKKKQ H
001: MKKVHELSTL CGITSCAIIY SPYDTSHEVW PSNSGVQRVV SEFRTLPEMD QHKKMVDQEG FLKQRIAKPT ENLRRQRKDN KELEMTEVMF RCLIGNMEML
101: KSESQSESTT MVYENDEPS
101: KSESQSESTT MVYENDEPS
Arabidopsis Description
At5g27810 [Source:UniProtKB/TrEMBL;Acc:Q3E8Z9]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.