Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G550600.1 | Wheat | nucleus | 88.98 | 87.14 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 88.56 | 86.72 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 86.86 | 85.06 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 64.41 | 82.16 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 63.98 | 62.66 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 63.14 | 61.83 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 63.98 | 57.85 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 40.25 | 51.63 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 51.69 | 49.19 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 8.47 | 48.78 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 64.41 | 48.56 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 45.76 | 47.58 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 41.1 | 42.73 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 36.02 | 40.09 |
| EES06917 | Sorghum | mitochondrion, nucleus | 38.14 | 34.75 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 40.68 | 34.53 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 45.34 | 33.13 |
| Zm00001d016791_P001 | Maize | mitochondrion | 39.41 | 32.4 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 25.85 | 32.11 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 22.03 | 31.9 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 30.93 | 31.74 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 41.1 | 31.39 |
| KXG38099 | Sorghum | plastid | 41.53 | 31.11 |
| Bra012335.1-P | Field mustard | mitochondrion | 21.19 | 30.86 |
| CDY25744 | Canola | mitochondrion | 21.19 | 30.86 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 30.08 | 30.6 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 38.98 | 29.97 |
| TraesCS7D01G548500.1 | Wheat | plastid | 29.66 | 29.79 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 29.66 | 29.66 |
| Bra024521.1-P | Field mustard | mitochondrion | 20.34 | 29.63 |
| CDY04801 | Canola | mitochondrion, nucleus | 20.34 | 29.63 |
| CDY21372 | Canola | mitochondrion | 20.34 | 29.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.24 | 29.61 |
| KRG88863 | Soybean | mitochondrion, nucleus | 17.37 | 29.29 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 28.39 | 28.88 |
| EER91288 | Sorghum | mitochondrion, nucleus | 37.71 | 28.34 |
| PGSC0003DMT400086956 | Potato | nucleus | 17.37 | 27.89 |
| KRH30113 | Soybean | nucleus | 19.92 | 27.49 |
| KRH72060 | Soybean | nucleus | 19.49 | 26.9 |
| KRG89836 | Soybean | nucleus | 16.95 | 26.85 |
| PGSC0003DMT400089787 | Potato | cytosol | 19.07 | 25.86 |
| KRH33740 | Soybean | nucleus | 17.37 | 25.79 |
| CDY33537 | Canola | nucleus | 21.19 | 25.51 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 26.27 | 25.31 |
| Solyc01g102260.2.1 | Tomato | nucleus | 26.69 | 25.3 |
| CDX80580 | Canola | nucleus | 21.61 | 25.25 |
| KRG98149 | Soybean | nucleus | 22.46 | 24.88 |
| Bra005166.1-P | Field mustard | mitochondrion, nucleus | 13.14 | 24.8 |
| KRG97962 | Soybean | nucleus | 25.0 | 24.69 |
| CDY64992 | Canola | mitochondrion, nucleus | 16.1 | 24.68 |
| KRH30476 | Soybean | nucleus | 15.68 | 24.67 |
| KRH30919 | Soybean | nucleus | 25.0 | 24.38 |
| KRG98143 | Soybean | nucleus | 21.61 | 24.17 |
| Bra009913.1-P | Field mustard | nucleus | 20.76 | 24.14 |
| CDX88234 | Canola | nucleus | 18.64 | 24.04 |
| KRG98148 | Soybean | nucleus | 23.31 | 24.02 |
| KRH66052 | Soybean | mitochondrion, nucleus | 22.88 | 24.0 |
| KRH30119 | Soybean | cytosol | 16.1 | 23.6 |
| KRG98150 | Soybean | mitochondrion, nucleus | 16.53 | 23.35 |
| KRG98152 | Soybean | nucleus | 18.64 | 23.16 |
| AT5G26630.1 | Thale cress | nucleus | 21.19 | 22.94 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 11.44 | 22.69 |
| PGSC0003DMT400003073 | Potato | cytosol | 10.17 | 22.22 |
| KRH66114 | Soybean | nucleus | 17.8 | 21.21 |
| KRH30473 | Soybean | mitochondrion, nucleus | 19.49 | 20.81 |
| KRG88915 | Soybean | mitochondrion, nucleus | 18.22 | 20.77 |
| KRH30472 | Soybean | nucleus | 18.64 | 20.75 |
| KRG98142 | Soybean | nucleus | 23.31 | 20.6 |
| Bra020555.1-P | Field mustard | nucleus | 18.64 | 20.37 |
| CDY05540 | Canola | nucleus | 18.64 | 20.37 |
| CDY25000 | Canola | nucleus | 18.64 | 20.37 |
| CDY71896 | Canola | nucleus | 14.83 | 20.35 |
| PGSC0003DMT400073719 | Potato | nucleus | 22.03 | 19.92 |
| KRH72066 | Soybean | mitochondrion, nucleus | 17.37 | 19.9 |
| PGSC0003DMT400095062 | Potato | nucleus | 23.73 | 19.86 |
| AT3G05860.1 | Thale cress | nucleus | 21.61 | 19.62 |
| AT1G65300.1 | Thale cress | nucleus | 22.88 | 19.42 |
| PGSC0003DMT400090586 | Potato | nucleus | 19.07 | 19.15 |
| CDY27735 | Canola | nucleus | 21.61 | 19.1 |
| Bra029469.1-P | Field mustard | nucleus | 24.58 | 19.08 |
| CDY60402 | Canola | nucleus | 24.58 | 19.08 |
| KRG98147 | Soybean | mitochondrion, nucleus | 20.76 | 19.07 |
| PGSC0003DMT400088489 | Potato | nucleus | 16.95 | 18.78 |
| PGSC0003DMT400089454 | Potato | nucleus | 19.49 | 18.78 |
| PGSC0003DMT400087890 | Potato | cytosol | 8.9 | 18.75 |
| AT5G35120.1 | Thale cress | cytosol | 8.47 | 18.69 |
| Bra018490.1-P | Field mustard | nucleus | 22.46 | 18.28 |
| CDX97329 | Canola | nucleus | 22.46 | 18.28 |
| AT1G65330.1 | Thale cress | nucleus | 20.76 | 17.56 |
| AT5G48670.1 | Thale cress | nucleus | 23.73 | 17.45 |
| PGSC0003DMT400091650 | Potato | nucleus | 19.07 | 17.37 |
| CDY38696 | Canola | nucleus | 20.34 | 17.27 |
| Bra039404.1-P | Field mustard | nucleus | 22.03 | 17.22 |
| PGSC0003DMT400088654 | Potato | nucleus | 23.73 | 17.13 |
| PGSC0003DMT400088008 | Potato | nucleus | 13.98 | 17.1 |
| PGSC0003DMT400090953 | Potato | nucleus | 24.15 | 16.96 |
| AT1G59930.1 | Thale cress | cytosol | 9.32 | 16.67 |
| Bra035448.1-P | Field mustard | nucleus | 18.64 | 16.67 |
| KRH30471 | Soybean | nucleus | 21.19 | 16.5 |
| KRG88914 | Soybean | cytosol | 15.25 | 16.44 |
| PGSC0003DMT400095417 | Potato | cytosol | 8.9 | 16.41 |
| Bra035449.1-P | Field mustard | nucleus | 18.22 | 16.29 |
| PGSC0003DMT400095755 | Potato | nucleus | 23.73 | 16.28 |
| CDY05207 | Canola | nucleus | 22.88 | 16.17 |
| CDY27734 | Canola | nucleus | 22.88 | 16.07 |
| KRG88862 | Soybean | nucleus | 21.19 | 15.97 |
| PGSC0003DMT400061726 | Potato | nucleus | 22.03 | 15.9 |
| Bra041022.1-P | Field mustard | nucleus | 22.46 | 15.87 |
| PGSC0003DMT400090516 | Potato | nucleus | 11.86 | 15.82 |
| AT5G27960.1 | Thale cress | nucleus | 20.76 | 15.31 |
| CDX80577 | Canola | mitochondrion, nucleus | 19.07 | 14.95 |
| KRG98146 | Soybean | nucleus | 20.34 | 14.63 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 21.61 | 14.61 |
| AT2G28700.1 | Thale cress | nucleus | 20.34 | 14.59 |
| CDX88231 | Canola | nucleus | 16.95 | 14.49 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 23.31 | 14.36 |
| PGSC0003DMT400077258 | Potato | nucleus | 23.73 | 14.36 |
| AT5G26650.1 | Thale cress | nucleus | 22.03 | 14.21 |
| AT5G26580.1 | Thale cress | nucleus | 20.34 | 13.91 |
| CDY18830 | Canola | nucleus | 19.92 | 13.66 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 20.34 | 13.19 |
| CDY71564 | Canola | nucleus | 18.64 | 12.98 |
| Bra020552.1-P | Field mustard | nucleus | 18.22 | 12.61 |
| PGSC0003DMT400085623 | Potato | nucleus | 10.59 | 12.5 |
| PGSC0003DMT400085256 | Potato | nucleus | 19.92 | 12.43 |
| AT1G31630.1 | Thale cress | mitochondrion | 17.8 | 12.39 |
| PGSC0003DMT400086447 | Potato | cytosol | 9.75 | 11.98 |
| CDY70782 | Canola | nucleus | 16.1 | 11.76 |
| CDY05333 | Canola | nucleus | 18.22 | 11.41 |
| CDY05515 | Canola | nucleus | 18.22 | 11.41 |
| Bra040248.1-P | Field mustard | nucleus | 19.92 | 11.38 |
| Bra020550.1-P | Field mustard | nucleus | 18.22 | 11.32 |
| CDY67043 | Canola | nucleus | 18.22 | 11.0 |
| PGSC0003DMT400086919 | Potato | nucleus | 11.44 | 10.98 |
| Bra020525.1-P | Field mustard | nucleus | 18.22 | 10.89 |
| AT1G31640.1 | Thale cress | mitochondrion | 21.19 | 10.78 |
| Solyc07g043080.1.1 | Tomato | cytosol | 5.51 | 10.48 |
| PGSC0003DMT400094378 | Potato | nucleus | 6.78 | 10.26 |
| Bra020524.1-P | Field mustard | nucleus | 15.25 | 10.0 |
| CDY05514 | Canola | nucleus | 15.25 | 10.0 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 11.44 | 9.57 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 6.36 | 9.2 |
| PGSC0003DMT400094113 | Potato | cytosol | 6.36 | 8.67 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 2.54 | 5.13 |
| PGSC0003DMT400089615 | Potato | cytosol | 5.08 | 5.04 |
| PGSC0003DMT400061722 | Potato | plastid | 2.12 | 4.81 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 3.39 | 3.98 |
| PGSC0003DMT400091747 | Potato | plastid | 2.54 | 3.95 |
| PGSC0003DMT400065010 | Potato | vacuole | 2.97 | 3.5 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G551000.1 | EnsemblPlantsGene:TraesCS7D01G551000 | Gene3D:3.40.1810.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | ncoils:Coil | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 | PFAM:PF00319 | PFscan:PS50066 |
| PRINTS:PR00404 | SEG:seg | SMART:SM00432 | SUPFAM:SSF55455 | MapMan:15.5.14 | : |
Description
No Description!
Coordinates
chr7D:-:634708874..634709584
Molecular Weight (calculated)
26320.9 Da
IEP (calculated)
8.463
GRAVY (calculated)
-0.489
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRNVTLQYT PHDSTRRKRF KKRLKGLMKK ADELAVLCDA KTCVLVYEEG KAAPEVFPSQ AEAVGILNRF KSIPELWRCK EVMNQKGFIT KRIDKLREQV
101: DKTRRECEDG EIRSLLHKTM HGDLSGLVGL NIEDLTKVGY KVDMLLKSIT ERKEKIHSQA PPPAPCVATG SIDMGSPPLY PAPPQQESRL DMVSSGGDLD
201: TLVYGGYAGA NFSSSDTMMQ MQSFDMDFGS SPFPPM
101: DKTRRECEDG EIRSLLHKTM HGDLSGLVGL NIEDLTKVGY KVDMLLKSIT ERKEKIHSQA PPPAPCVATG SIDMGSPPLY PAPPQQESRL DMVSSGGDLD
201: TLVYGGYAGA NFSSSDTMMQ MQSFDMDFGS SPFPPM
001: MKRKMKLSLI ENSVSRKTTF TKRKKGMTKK LTELVTLCGV EACAVVYSPF NSIPEAWPSR EGVEDVVSKF MELSVLDRTK KMVDQETFIS QRIAKEKEQL
101: QKLRDENHNS QIRELMFGCL KGETNVYNLD GRDLQDLSLY IDKYLNGLTR RIEILIENGE SSSSLPLPIV ANAAAPVGFD GPMFQYHNQN QQKPVQFQYQ
201: ALYDFYDQIP KKIHGFNMNM NKDSNQSMVL DLNQNLNDGE DEGIPCMDNN NYHPEIDCLA TVTTAPTDVC APNITNDL
101: QKLRDENHNS QIRELMFGCL KGETNVYNLD GRDLQDLSLY IDKYLNGLTR RIEILIENGE SSSSLPLPIV ANAAAPVGFD GPMFQYHNQN QQKPVQFQYQ
201: ALYDFYDQIP KKIHGFNMNM NKDSNQSMVL DLNQNLNDGE DEGIPCMDNN NYHPEIDCLA TVTTAPTDVC APNITNDL
Arabidopsis Description
PHE2MADS-box transcription factor PHERES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJK8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.