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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 5
  • plasma membrane 2
  • cytosol 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:plasma membrane
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400091747 Potato plastid 83.65 57.24
PGSC0003DMT400097522 Potato cytosol, extracellular, mitochondrion, nucleus 57.69 51.28
PGSC0003DMT400085093 Potato extracellular, plastid, vacuole 82.69 42.79
PGSC0003DMT400065010 Potato vacuole 80.77 42.0
PGSC0003DMT400061724 Potato mitochondrion, nucleus 88.46 24.02
PGSC0003DMT400085114 Potato cytosol, endoplasmic reticulum, nucleus 60.58 22.34
PGSC0003DMT400061726 Potato nucleus 63.46 20.18
PGSC0003DMT400094378 Potato nucleus 25.96 17.31
PGSC0003DMT400089615 Potato cytosol 39.42 17.23
PGSC0003DMT400086447 Potato cytosol 24.04 13.02
PGSC0003DMT400085623 Potato nucleus 21.15 11.0
PGSC0003DMT400077258 Potato nucleus 39.42 10.51
PGSC0003DMT400094113 Potato cytosol 17.31 10.4
PGSC0003DMT400086919 Potato nucleus 24.04 10.16
PGSC0003DMT400090953 Potato nucleus 30.77 9.52
PGSC0003DMT400085256 Potato nucleus 33.65 9.26
PGSC0003DMT400088489 Potato nucleus 18.27 8.92
PGSC0003DMT400095755 Potato nucleus 27.88 8.43
PGSC0003DMT400090516 Potato nucleus 13.46 7.91
PGSC0003DMT400088654 Potato nucleus 24.04 7.65
PGSC0003DMT400095062 Potato nucleus 18.27 6.74
PGSC0003DMT400073719 Potato nucleus 14.42 5.75
PGSC0003DMT400088008 Potato nucleus 9.62 5.18
PGSC0003DMT400089454 Potato nucleus 11.54 4.9
PGSC0003DMT400095426 Potato mitochondrion 12.5 3.72
Os03t0582400-01 Rice nucleus 5.77 2.41
KXG28888 Sorghum nucleus 5.77 2.35
KXG28890 Sorghum mitochondrion 5.77 2.35
TraesCS2B01G146100.1 Wheat nucleus 7.69 2.2
TraesCS7D01G551000.1 Wheat nucleus 4.81 2.12
Zm00001d016791_P001 Maize mitochondrion 5.77 2.09
TraesCS6D01G342000.1 Wheat nucleus 4.81 2.07
TraesCS7B01G484100.1 Wheat mitochondrion, nucleus 4.81 2.07
KXG32310 Sorghum nucleus 4.81 2.07
TraesCS6B01G391600.1 Wheat nucleus 4.81 2.04
TraesCS6B01G391700.1 Wheat nucleus 4.81 2.04
Zm00001d048894_P001 Maize mitochondrion 4.81 2.02
KXG28889 Sorghum nucleus 4.81 2.0
PGSC0003DMT400091650 Potato nucleus 4.81 1.93
HORVU6Hr1G085570.1 Barley mitochondrion, nucleus 4.81 1.92
TraesCS7A01G551000.1 Wheat nucleus 5.77 1.92
TraesCS6A01G359100.1 Wheat mitochondrion 4.81 1.92
TraesCS6B01G391800.1 Wheat mitochondrion 4.81 1.92
TraesCS6D01G342100.1 Wheat mitochondrion 4.81 1.92
EER91288 Sorghum mitochondrion, nucleus 5.77 1.91
KXG38099 Sorghum plastid 5.77 1.9
Zm00001d013792_P001 Maize mitochondrion, nucleus 4.81 1.8
KXG28893 Sorghum nucleus 2.88 1.79
OQU83806 Sorghum nucleus 2.88 1.71
TraesCS7A01G561000.1 Wheat nucleus 3.85 1.71
TraesCS7D01G548500.1 Wheat plastid 3.85 1.7
TraesCS6A01G358900.1 Wheat nucleus 3.85 1.69
TraesCS6D01G341700.1 Wheat nucleus 3.85 1.66
TraesCS7B01G484500.1 Wheat nucleus 3.85 1.66
TraesCS7D01G550600.1 Wheat nucleus 3.85 1.66
KXG28892 Sorghum nucleus 2.88 1.62
TraesCS7D01G536700.1 Wheat nucleus 4.81 1.6
TraesCS7A01G398800.1 Wheat nucleus 4.81 1.55
TraesCS7B01G299400.1 Wheat nucleus 4.81 1.55
TraesCS7D01G393000.1 Wheat nucleus 4.81 1.55
EES06917 Sorghum mitochondrion, nucleus 3.85 1.54
TraesCS2D01G128000.1 Wheat nucleus 2.88 1.42
TraesCS2A01G146400.1 Wheat mitochondrion 4.81 1.4
TraesCS6B01G027900.1 Wheat nucleus 2.88 1.32
TraesCS6D01G023800.1 Wheat mitochondrion 2.88 1.32
HORVU6Hr1G085540.1 Barley mitochondrion 2.88 1.31
TraesCS2D01G150900.1 Wheat mitochondrion 3.85 1.3
GSMUA_Achr3P24560_001 Banana nucleus 2.88 1.29
TraesCS7B01G485400.1 Wheat nucleus 2.88 1.28
TraesCS2B01G171700.1 Wheat mitochondrion 1.92 1.05
EES10067 Sorghum mitochondrion 1.92 0.97
TraesCS6B01G392600.1 Wheat nucleus 2.88 0.97
TraesCS6A01G020900.1 Wheat mitochondrion 1.92 0.95
TraesCS6B01G028300.1 Wheat mitochondrion 1.92 0.95
HORVU6Hr1G085670.1 Barley nucleus 2.88 0.9
TraesCS6A01G022700.1 Wheat mitochondrion 1.92 0.88
TraesCS6D01G024300.1 Wheat mitochondrion 1.92 0.88
GSMUA_Achr3P08500_001 Banana nucleus 1.92 0.87
GSMUA_AchrUn_... Banana nucleus 1.92 0.86
OQU83804 Sorghum mitochondrion 1.92 0.85
GSMUA_Achr8P06150_001 Banana nucleus 1.92 0.82
TraesCS6D01G341800.1 Wheat mitochondrion, nucleus 1.92 0.81
TraesCS6D01G342700.1 Wheat nucleus 1.92 0.65
Bra024521.1-P Field mustard mitochondrion 0.96 0.62
CDY04801 Canola mitochondrion, nucleus 0.96 0.62
CDY21372 Canola mitochondrion 0.96 0.62
HORVU7Hr1G121600.1 Barley nucleus 0.96 0.54
HORVU2Hr1G022060.1 Barley nucleus, plastid 0.96 0.49
TraesCS3A01G312600.1 Wheat nucleus 0.96 0.4
TraesCS3B01G159600.1 Wheat nucleus 0.96 0.4
AT1G22590.2 Thale cress mitochondrion, nucleus 0.0 0.0
Bra012335.1-P Field mustard mitochondrion 0.0 0.0
CDY25744 Canola mitochondrion 0.0 0.0
GSMUA_Achr2P18400_001 Banana nucleus 0.0 0.0
GSMUA_Achr2P18410_001 Banana nucleus 0.0 0.0
GSMUA_Achr3P05500_001 Banana nucleus 0.0 0.0
HORVU6Hr1G003730.1 Barley nucleus 0.0 0.0
PGSC0003DMT400003073 Potato cytosol 0.0 0.0
PGSC0003DMT400086956 Potato nucleus 0.0 0.0
PGSC0003DMT400087890 Potato cytosol 0.0 0.0
PGSC0003DMT400089787 Potato cytosol 0.0 0.0
PGSC0003DMT400090586 Potato nucleus 0.0 0.0
PGSC0003DMT400095417 Potato cytosol 0.0 0.0
TraesCS3A01G137500.1 Wheat cytosol 0.0 0.0
TraesCS3B01G155200.1 Wheat cytosol 0.0 0.0
TraesCS3D01G138400.1 Wheat cytosol 0.0 0.0
TraesCS6A01G020500.1 Wheat mitochondrion, nucleus 0.0 0.0
TraesCS6A01G359700.1 Wheat nucleus 0.0 0.0
TraesCS6B01G028100.1 Wheat mitochondrion 0.0 0.0
TraesCS6D01G024000.1 Wheat mitochondrion, nucleus 0.0 0.0
TraesCS7A01G559500.1 Wheat nucleus 0.0 0.0
TraesCS7B01G484000.1 Wheat nucleus 0.0 0.0
TraesCS7B01G484600.1 Wheat nucleus 0.0 0.0
TraesCS7D01G550500.1 Wheat nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400061722EnsemblPlantsGene:PGSC0003DMG400024022PGSC:PGSC0003DMG400024022SEG:segUniParc:UPI0002948B36UniProt:M1C7X2
MapMan:35.2:::::
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400024022]
Coordinates
chr1:-:45613018..45613332
Molecular Weight (calculated)
11314.1 Da
IEP (calculated)
3.575
GRAVY (calculated)
0.320
Length
104 amino acids
Sequence
(BLAST)
001: MVPSNAPPQI PQFMFPLTTP PQIVPLVDLS QVPSLLSSQR YPEMAYPILP TTMAYPMPSL MIPPPMSNLV FSPMALQIDP FMNIPSMSAS VPMDNNVDGS
101: IGIL
Best Arabidopsis Sequence Match ( AT3G32904.1 )
(BLAST)
001: MGNYRFKDPT ILGREFILDK FNKEFNLNIN YQFVKEKLDQ LKRKYKKYKE LMKNSTGISV DTTTSVISTS NSWWQEREPQ FSVNQRREQL VNDGLDNDEG
101: HVYFETYDGD MQDSQVLETQ ENEEIPTSRI QQRGGLRRGS SSQRGAGNFQ ISTRIGSRGS RRKQSFETTL TDTITGLREF QRQSLQQMRP NCFDKDDYNK
201: FDMAMKLFES MNLPNDTDFY WACIHAFKAE IFWRKYFINR AERTVEDNLK FLQALTRDTR DNEYVGKRQW GHGFQQWGTP PTAPQWNSPS NVPQWTIPPT
301: TPQWGTPSSM PQWSSSPTAP QLSSPPTAPQ
Arabidopsis Description
Myb/SANT-like DNA-binding domain protein [Source:UniProtKB/TrEMBL;Acc:F4JBG1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.