Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400088008 | Potato | nucleus | 65.9 | 89.12 |
| PGSC0003DMT400089787 | Potato | cytosol | 32.18 | 48.28 |
| PGSC0003DMT400003073 | Potato | cytosol | 19.92 | 48.15 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 6.9 | 43.9 |
| PGSC0003DMT400086956 | Potato | nucleus | 24.14 | 42.86 |
| PGSC0003DMT400089454 | Potato | nucleus | 36.78 | 39.18 |
| PGSC0003DMT400090586 | Potato | nucleus | 33.72 | 37.45 |
| PGSC0003DMT400087890 | Potato | cytosol | 15.33 | 35.71 |
| PGSC0003DMT400088654 | Potato | nucleus | 43.3 | 34.56 |
| PGSC0003DMT400095062 | Potato | nucleus | 36.78 | 34.04 |
| PGSC0003DMT400090516 | Potato | nucleus | 22.61 | 33.33 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 10.73 | 32.94 |
| PGSC0003DMT400090953 | Potato | nucleus | 39.08 | 30.36 |
| PGSC0003DMT400095755 | Potato | nucleus | 39.85 | 30.23 |
| PGSC0003DMT400088489 | Potato | nucleus | 24.52 | 30.05 |
| PGSC0003DMT400085623 | Potato | nucleus | 22.61 | 29.5 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 17.62 | 29.49 |
| PGSC0003DMT400061726 | Potato | nucleus | 36.4 | 29.05 |
| PGSC0003DMT400095417 | Potato | cytosol | 14.18 | 28.91 |
| PGSC0003DMT400077258 | Potato | nucleus | 42.91 | 28.72 |
| PGSC0003DMT400085256 | Potato | nucleus | 41.38 | 28.57 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 41.38 | 28.2 |
| PGSC0003DMT400086919 | Potato | nucleus | 26.44 | 28.05 |
| PGSC0003DMT400091650 | Potato | nucleus | 27.59 | 27.8 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 17.24 | 27.44 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 22.61 | 26.7 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 19.16 | 26.32 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 19.54 | 26.15 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 18.39 | 26.09 |
| PGSC0003DMT400086447 | Potato | cytosol | 19.16 | 26.04 |
| PGSC0003DMT400094113 | Potato | cytosol | 17.24 | 26.01 |
| PGSC0003DMT400094378 | Potato | nucleus | 15.33 | 25.64 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 34.1 | 25.5 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 19.16 | 25.13 |
| Bra024521.1-P | Field mustard | mitochondrion | 15.33 | 24.69 |
| CDY04801 | Canola | mitochondrion, nucleus | 15.33 | 24.69 |
| CDY21372 | Canola | mitochondrion | 15.33 | 24.69 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 18.01 | 24.61 |
| KXG28892 | Sorghum | nucleus | 17.24 | 24.32 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 17.24 | 24.32 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 17.24 | 24.32 |
| OQU83806 | Sorghum | nucleus | 16.09 | 24.0 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 14.94 | 23.93 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 21.07 | 23.91 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 16.86 | 23.78 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 21.07 | 23.71 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 19.16 | 23.7 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 16.86 | 23.4 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 10.34 | 23.08 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 24.9 | 23.05 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 16.86 | 23.04 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 19.92 | 22.91 |
| EES10067 | Sorghum | mitochondrion | 18.01 | 22.82 |
| TraesCS7D01G548500.1 | Wheat | plastid | 20.31 | 22.55 |
| Os03t0582400-01 | Rice | nucleus | 21.46 | 22.49 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 19.54 | 22.47 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 20.69 | 22.41 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 18.01 | 22.27 |
| Bra012335.1-P | Field mustard | mitochondrion | 13.79 | 22.22 |
| CDY25744 | Canola | mitochondrion | 13.79 | 22.22 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 19.92 | 22.22 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 19.92 | 22.22 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 19.92 | 22.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.54 | 21.89 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 20.31 | 21.63 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 20.31 | 21.63 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 22.99 | 21.58 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 19.92 | 21.58 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 16.86 | 21.46 |
| KXG28893 | Sorghum | nucleus | 13.79 | 21.43 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 19.54 | 21.16 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 19.54 | 21.16 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 18.77 | 21.12 |
| KXG32310 | Sorghum | nucleus | 19.54 | 21.07 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 19.54 | 20.82 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 16.86 | 20.75 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 19.16 | 20.75 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 18.01 | 20.7 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 18.01 | 20.52 |
| EES06917 | Sorghum | mitochondrion, nucleus | 20.31 | 20.46 |
| KXG28889 | Sorghum | nucleus | 19.16 | 20.0 |
| OQU83804 | Sorghum | mitochondrion | 18.01 | 20.0 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 17.24 | 19.82 |
| KXG28890 | Sorghum | mitochondrion | 19.16 | 19.61 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 17.62 | 19.49 |
| Zm00001d048894_P001 | Maize | mitochondrion | 18.39 | 19.43 |
| KXG28888 | Sorghum | nucleus | 18.77 | 19.22 |
| KXG38099 | Sorghum | plastid | 22.99 | 19.05 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 18.01 | 18.95 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 16.48 | 18.94 |
| Zm00001d016791_P001 | Maize | mitochondrion | 20.69 | 18.82 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 18.01 | 18.73 |
| EER91288 | Sorghum | mitochondrion, nucleus | 22.22 | 18.47 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 18.39 | 18.39 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 18.39 | 18.39 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 17.62 | 18.33 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 18.01 | 18.08 |
| PGSC0003DMT400091747 | Potato | plastid | 10.34 | 17.76 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 16.86 | 16.86 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 19.92 | 16.61 |
| PGSC0003DMT400065010 | Potato | vacuole | 12.64 | 16.5 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 12.64 | 16.42 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 19.16 | 15.97 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 18.39 | 15.53 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 18.39 | 15.48 |
| PGSC0003DMT400089615 | Potato | cytosol | 13.79 | 15.13 |
| PGSC0003DMT400061722 | Potato | plastid | 5.75 | 14.42 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 17.24 | 13.93 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 16.86 | 13.62 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 18.77 | 13.5 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 16.48 | 13.35 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 15.33 | 13.03 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 16.09 | 12.65 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 15.71 | 11.52 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 |
| InterPro:IPR002100 | InterPro:IPR036879 | UniProt:M1CSJ3 | InterPro:MADS_SRF-like | PFAM:PF00319 | EnsemblPlantsGene:PGSC0003DMG400028638 |
| PGSC:PGSC0003DMG400028638 | EnsemblPlants:PGSC0003DMT400073719 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000295E3F9 | SEG:seg |
Description
Mads box protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028638]
Coordinates
chr12:+:50083239..50084024
Molecular Weight (calculated)
30113.4 Da
IEP (calculated)
8.572
GRAVY (calculated)
-0.642
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRSKGKILY IENDTQRKAT YKKRQKVAFK KAQEISTLCE CKVAGVRYSE YHTKPMVYPN YEDAVETFRK FETLPPADQS KNMMTTEEFI KKIIKKKEEQ
101: LYKLQKENDI KEKTNMMHEV VNGKKIISID MKTNDLNDLM YVMKQNLKFF RKLKIKADEE GSTLNASQPI SSSGTNSEGP TSPTLLVPQV DPLITIPSSP
201: MLQELMYSST PQQMDSSMNI STMPMNNYSS SESIEWDDDS IMSFLMIHIS TTLMFNIQNN F
101: LYKLQKENDI KEKTNMMHEV VNGKKIISID MKTNDLNDLM YVMKQNLKFF RKLKIKADEE GSTLNASQPI SSSGTNSEGP TSPTLLVPQV DPLITIPSSP
201: MLQELMYSST PQQMDSSMNI STMPMNNYSS SESIEWDDDS IMSFLMIHIS TTLMFNIQNN F
001: MTRQKVKMTF IENETARKST FKKRKKGLLK KAQELGILCG VPIFAVVNSP YELNPEVWPS REAANQVVSQ WKTMSVMDKT KKMVNQETFL QQRITKATES
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
Arabidopsis Description
MADS-box protein AGL35 [Source:UniProtKB/TrEMBL;Acc:Q7XJK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.