Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400094113 | Potato | cytosol | 74.36 | 67.05 |
| PGSC0003DMT400085623 | Potato | nucleus | 83.33 | 65.0 |
| PGSC0003DMT400090516 | Potato | nucleus | 59.62 | 52.54 |
| PGSC0003DMT400086919 | Potato | nucleus | 79.49 | 50.41 |
| PGSC0003DMT400090953 | Potato | nucleus | 90.38 | 41.96 |
| PGSC0003DMT400095062 | Potato | nucleus | 74.36 | 41.13 |
| PGSC0003DMT400095755 | Potato | nucleus | 89.1 | 40.41 |
| PGSC0003DMT400088654 | Potato | nucleus | 75.0 | 35.78 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 68.59 | 30.66 |
| PGSC0003DMT400061722 | Potato | plastid | 17.31 | 25.96 |
| PGSC0003DMT400088489 | Potato | nucleus | 32.05 | 23.47 |
| PGSC0003DMT400089615 | Potato | cytosol | 35.26 | 23.11 |
| PGSC0003DMT400087890 | Potato | cytosol | 15.38 | 21.43 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 15.38 | 20.51 |
| PGSC0003DMT400089787 | Potato | cytosol | 21.79 | 19.54 |
| PGSC0003DMT400088008 | Potato | nucleus | 23.72 | 19.17 |
| PGSC0003DMT400095417 | Potato | cytosol | 15.38 | 18.75 |
| PGSC0003DMT400091747 | Potato | plastid | 16.67 | 17.11 |
| PGSC0003DMT400077258 | Potato | nucleus | 42.31 | 16.92 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 21.79 | 16.92 |
| PGSC0003DMT400085256 | Potato | nucleus | 39.74 | 16.4 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 29.49 | 16.31 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 39.74 | 16.19 |
| PGSC0003DMT400065010 | Potato | vacuole | 20.51 | 16.0 |
| PGSC0003DMT400073719 | Potato | nucleus | 25.64 | 15.33 |
| PGSC0003DMT400086447 | Potato | cytosol | 18.59 | 15.1 |
| PGSC0003DMT400061726 | Potato | nucleus | 30.77 | 14.68 |
| PGSC0003DMT400091650 | Potato | nucleus | 20.51 | 12.36 |
| PGSC0003DMT400090586 | Potato | nucleus | 18.59 | 12.34 |
| PGSC0003DMT400089454 | Potato | nucleus | 13.46 | 8.57 |
| PGSC0003DMT400003073 | Potato | cytosol | 5.77 | 8.33 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 10.9 | 7.05 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 10.26 | 6.99 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 10.26 | 6.9 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 10.26 | 6.78 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 10.26 | 6.64 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 10.26 | 6.64 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 10.26 | 6.64 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 9.62 | 6.41 |
| TraesCS7D01G548500.1 | Wheat | plastid | 9.62 | 6.38 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 9.62 | 6.22 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 8.97 | 6.17 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 8.97 | 6.17 |
| PGSC0003DMT400086956 | Potato | nucleus | 5.77 | 6.12 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 9.62 | 6.12 |
| Os03t0582400-01 | Rice | nucleus | 9.62 | 6.02 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 8.97 | 5.98 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 8.97 | 5.93 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 8.33 | 5.73 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 8.33 | 5.73 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 8.97 | 5.71 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 7.05 | 5.64 |
| EES06917 | Sorghum | mitochondrion, nucleus | 8.97 | 5.41 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 6.41 | 5.41 |
| KXG32310 | Sorghum | nucleus | 8.33 | 5.37 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 7.05 | 5.21 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 10.26 | 5.11 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 8.97 | 5.04 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 6.41 | 5.03 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 8.33 | 4.98 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 8.33 | 4.98 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 9.62 | 4.89 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 5.13 | 4.88 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 7.05 | 4.78 |
| EER91288 | Sorghum | mitochondrion, nucleus | 9.62 | 4.78 |
| KXG38099 | Sorghum | plastid | 9.62 | 4.76 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 7.05 | 4.74 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 6.41 | 4.74 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 7.69 | 4.62 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 7.05 | 4.49 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 8.97 | 4.47 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 6.41 | 4.41 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 7.05 | 4.38 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 8.97 | 4.33 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 8.97 | 4.33 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 5.13 | 4.32 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 5.13 | 4.32 |
| KXG28888 | Sorghum | nucleus | 7.05 | 4.31 |
| KXG28890 | Sorghum | mitochondrion | 7.05 | 4.31 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 5.13 | 4.26 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 7.05 | 4.21 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 5.13 | 4.21 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 8.33 | 4.21 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 8.33 | 4.19 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 5.13 | 4.19 |
| Zm00001d016791_P001 | Maize | mitochondrion | 7.69 | 4.18 |
| KXG28893 | Sorghum | nucleus | 4.49 | 4.17 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 9.62 | 4.13 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 5.77 | 4.07 |
| Zm00001d048894_P001 | Maize | mitochondrion | 6.41 | 4.05 |
| KXG28889 | Sorghum | nucleus | 6.41 | 4.0 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 6.41 | 3.98 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 8.97 | 3.93 |
| EES10067 | Sorghum | mitochondrion | 5.13 | 3.88 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 4.49 | 3.8 |
| KXG28892 | Sorghum | nucleus | 4.49 | 3.78 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 5.13 | 3.77 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 7.69 | 3.73 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 3.85 | 3.68 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 4.49 | 3.66 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 7.05 | 3.31 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 5.13 | 3.23 |
| Bra024521.1-P | Field mustard | mitochondrion | 3.21 | 3.09 |
| CDY04801 | Canola | mitochondrion, nucleus | 3.21 | 3.09 |
| CDY21372 | Canola | mitochondrion | 3.21 | 3.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 4.49 | 3.0 |
| OQU83804 | Sorghum | mitochondrion | 4.49 | 2.98 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 3.85 | 2.93 |
| OQU83806 | Sorghum | nucleus | 3.21 | 2.86 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 2.56 | 2.56 |
| Bra012335.1-P | Field mustard | mitochondrion | 2.56 | 2.47 |
| CDY25744 | Canola | mitochondrion | 2.56 | 2.47 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 0.0 | 0.0 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400094378 | EnsemblPlantsGene:PGSC0003DMG400043949 | PGSC:PGSC0003DMG400043949 | SEG:seg | UniParc:UPI000294AC62 | UniProt:M1DU09 |
| MapMan:35.2 | : | : | : | : | : |
Description
Gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400043949]
Coordinates
chr5:+:39092764..39093234
Molecular Weight (calculated)
17254.1 Da
IEP (calculated)
4.784
GRAVY (calculated)
-0.395
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPSDLNDLR YVFKKNLKKV HDLMIKEDDG EGSTSNVPQP IVEPMAPSRN NSEEPRDPSP LLFSQMFPSM VPQLFSPMPQ HMAVGRPHGL TPSMPSTIMD
101: YPIPSPMMDS LMPSPMIDSP MPSLMMAPPI YSPVSPTMTH QMDIPSIGVS TSMNNN
101: YPIPSPMMDS LMPSPMIDSP MPSLMMAPPI YSPVSPTMTH QMDIPSIGVS TSMNNN
001: MDIFVSFVVF ILSVLSVEST IHMKSIKMKP TGWDSQSENK FAERRHNNKI ECPNGTVPIL RAKEKHVIQY QEYPINNFTV LTAKYPGTHI AGMKVVEKHN
101: YRGVEAGLRT YNLIIDKNQS TSAQAYVARA FSGDANSIQV GWMINEQLFG DKRPWSYGTW LGKHGTGCFN VKCPGFVQVA KNGPISVPLK FDYLLWLTIH
201: QDKETKNWWL TQTNPDDDTK NHLGYWPKEL FNLLGDGADF VGFGGMVSGD PRTPSPPMGN GRLPNKDDRL WSGYLDHLTI IQPDYEHAGF NYPMTEPLVD
301: SNVCYDVNLV GYVDHQVGIA MSYGGPGGIK CGD
101: YRGVEAGLRT YNLIIDKNQS TSAQAYVARA FSGDANSIQV GWMINEQLFG DKRPWSYGTW LGKHGTGCFN VKCPGFVQVA KNGPISVPLK FDYLLWLTIH
201: QDKETKNWWL TQTNPDDDTK NHLGYWPKEL FNLLGDGADF VGFGGMVSGD PRTPSPPMGN GRLPNKDDRL WSGYLDHLTI IQPDYEHAGF NYPMTEPLVD
301: SNVCYDVNLV GYVDHQVGIA MSYGGPGGIK CGD
Arabidopsis Description
Protein of Unknown Function (DUF239) [Source:TAIR;Acc:AT5G36680]
SUBAcon: [extracellular,plasma membrane]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.