Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400086956 | Potato | nucleus | 39.76 | 88.44 |
| PGSC0003DMT400087890 | Potato | cytosol | 30.28 | 88.39 |
| PGSC0003DMT400095417 | Potato | cytosol | 33.03 | 84.38 |
| PGSC0003DMT400086447 | Potato | cytosol | 46.79 | 79.69 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 89.91 | 76.76 |
| PGSC0003DMT400090586 | Potato | nucleus | 54.43 | 75.74 |
| Solyc07g043080.1.1 | Tomato | cytosol | 24.46 | 64.52 |
| PGSC0003DMT400061722 | Potato | plastid | 20.18 | 63.46 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 52.29 | 60.64 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 35.47 | 57.71 |
| PGSC0003DMT400065010 | Potato | vacuole | 35.17 | 57.5 |
| PGSC0003DMT400091747 | Potato | plastid | 22.63 | 48.68 |
| PGSC0003DMT400089787 | Potato | cytosol | 24.46 | 45.98 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 5.5 | 43.9 |
| PGSC0003DMT400003073 | Potato | cytosol | 14.37 | 43.52 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 14.98 | 41.88 |
| PGSC0003DMT400089454 | Potato | nucleus | 30.58 | 40.82 |
| PGSC0003DMT400077258 | Potato | nucleus | 46.79 | 39.23 |
| PGSC0003DMT400085256 | Potato | nucleus | 42.81 | 37.04 |
| PGSC0003DMT400095062 | Potato | nucleus | 31.5 | 36.52 |
| PGSC0003DMT400073719 | Potato | nucleus | 29.05 | 36.4 |
| PGSC0003DMT400090953 | Potato | nucleus | 32.72 | 31.85 |
| PGSC0003DMT400088654 | Potato | nucleus | 31.8 | 31.8 |
| PGSC0003DMT400095755 | Potato | nucleus | 33.33 | 31.69 |
| PGSC0003DMT400088008 | Potato | nucleus | 18.65 | 31.61 |
| PGSC0003DMT400085623 | Potato | nucleus | 19.27 | 31.5 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 15.6 | 31.1 |
| PGSC0003DMT400089615 | Potato | cytosol | 22.63 | 31.09 |
| PGSC0003DMT400090516 | Potato | nucleus | 16.82 | 31.07 |
| PGSC0003DMT400094378 | Potato | nucleus | 14.68 | 30.77 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 7.95 | 30.59 |
| Bra024521.1-P | Field mustard | mitochondrion | 14.98 | 30.25 |
| CDY04801 | Canola | mitochondrion, nucleus | 14.98 | 30.25 |
| CDY21372 | Canola | mitochondrion | 14.98 | 30.25 |
| PGSC0003DMT400088489 | Potato | nucleus | 19.57 | 30.05 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 14.68 | 29.45 |
| CDY25744 | Canola | mitochondrion | 14.37 | 29.01 |
| Bra012335.1-P | Field mustard | mitochondrion | 14.07 | 28.4 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 13.46 | 28.21 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 15.9 | 28.11 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 15.9 | 28.11 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 29.97 | 28.08 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 16.21 | 27.75 |
| PGSC0003DMT400094113 | Potato | cytosol | 14.68 | 27.75 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 15.29 | 27.17 |
| PGSC0003DMT400091650 | Potato | nucleus | 21.41 | 27.03 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 14.98 | 26.49 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 14.07 | 24.47 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 15.6 | 24.17 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 17.13 | 24.14 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 16.82 | 24.02 |
| PGSC0003DMT400086919 | Potato | nucleus | 18.04 | 23.98 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 16.21 | 23.98 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 16.51 | 23.48 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 13.76 | 23.08 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 13.46 | 23.04 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 15.9 | 22.91 |
| Os03t0582400-01 | Rice | nucleus | 17.43 | 22.89 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 17.13 | 22.86 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 17.13 | 22.86 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 16.82 | 22.82 |
| EES10067 | Sorghum | mitochondrion | 14.37 | 22.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.21 | 22.75 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 13.15 | 22.63 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 15.6 | 22.47 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 16.51 | 22.41 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 17.74 | 22.31 |
| KXG28892 | Sorghum | nucleus | 12.54 | 22.16 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 15.9 | 22.03 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 15.29 | 22.03 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 13.76 | 21.95 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 17.43 | 21.84 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 17.43 | 21.84 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 14.07 | 21.8 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 16.51 | 21.77 |
| OQU83806 | Sorghum | nucleus | 11.62 | 21.71 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 15.6 | 21.61 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 13.15 | 21.61 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 14.98 | 21.59 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 15.6 | 21.16 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 16.21 | 21.12 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 16.82 | 21.07 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 14.98 | 20.94 |
| TraesCS7D01G548500.1 | Wheat | plastid | 14.98 | 20.85 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 15.9 | 20.72 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 14.98 | 20.33 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 14.98 | 20.33 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 14.37 | 20.26 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 14.37 | 20.09 |
| EES06917 | Sorghum | mitochondrion, nucleus | 15.9 | 20.08 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 14.98 | 20.0 |
| OQU83804 | Sorghum | mitochondrion | 14.37 | 20.0 |
| KXG32310 | Sorghum | nucleus | 14.68 | 19.83 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 12.84 | 19.81 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 16.82 | 19.78 |
| KXG28893 | Sorghum | nucleus | 10.09 | 19.64 |
| Zm00001d016791_P001 | Maize | mitochondrion | 17.13 | 19.51 |
| Zm00001d048894_P001 | Maize | mitochondrion | 14.37 | 19.03 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 12.84 | 18.5 |
| EER91288 | Sorghum | mitochondrion, nucleus | 17.74 | 18.47 |
| KXG28890 | Sorghum | mitochondrion | 14.37 | 18.43 |
| KXG28889 | Sorghum | nucleus | 14.07 | 18.4 |
| KXG28888 | Sorghum | nucleus | 14.07 | 18.04 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 16.82 | 17.57 |
| KXG38099 | Sorghum | plastid | 16.82 | 17.46 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 15.9 | 16.61 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 14.37 | 15.31 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 14.07 | 14.89 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 13.76 | 14.52 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 14.07 | 14.24 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 13.76 | 13.93 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 14.68 | 13.48 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 14.68 | 13.22 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 12.84 | 13.04 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 12.54 | 12.35 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 |
| InterPro:IPR002100 | InterPro:IPR036879 | UniProt:M1C7X4 | InterPro:MADS_SRF-like | PFAM:PF00319 | EnsemblPlantsGene:PGSC0003DMG400024024 |
| PGSC:PGSC0003DMG400024024 | EnsemblPlants:PGSC0003DMT400061726 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000295B166 | SEG:seg |
Description
Type I MADS box transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400024024]
Coordinates
chr1:-:45621657..45622640
Molecular Weight (calculated)
36793.4 Da
IEP (calculated)
6.686
GRAVY (calculated)
-0.496
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRKKVKLAF MENNTERRVS YRKRQKGFLG KARELNTLCD VELATLVNSP YHNEPEVFPN HEAATGMFTK FIDLPEEKKS KNMKTHEKIT EKRIEKIENE
101: LEKLRKETKK MEYTNQMYGL LNGEEITNSR HPEDLNDLCY VINKNLKLIN DGIKAKTHEE GSTSNASQPI AGPMDSSGTS FDMSWAPLLA PFDAPVLSEI
201: PFLVSSTVPC GTNFERPRAP LNLVPDVTPT SMVPLMAPLM VPSNAPAQIP QFKFPLTTPP QMVPLVDLSQ VPSLLSSQRY PEMAYPILPT TMAYPMPSPM
301: ITPPMSNFSV SSNGTTNRPF DEYPLQE
101: LEKLRKETKK MEYTNQMYGL LNGEEITNSR HPEDLNDLCY VINKNLKLIN DGIKAKTHEE GSTSNASQPI AGPMDSSGTS FDMSWAPLLA PFDAPVLSEI
201: PFLVSSTVPC GTNFERPRAP LNLVPDVTPT SMVPLMAPLM VPSNAPAQIP QFKFPLTTPP QMVPLVDLSQ VPSLLSSQRY PEMAYPILPT TMAYPMPSPM
301: ITPPMSNFSV SSNGTTNRPF DEYPLQE
001: MTRQKVKMTF IENETARKST FKKRKKGLLK KAQELGILCG VPIFAVVNSP YELNPEVWPS REAANQVVSQ WKTMSVMDKT KKMVNQETFL QQRITKATES
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
Arabidopsis Description
MADS-box protein AGL35 [Source:UniProtKB/TrEMBL;Acc:Q7XJK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.