Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400086956 | Potato | nucleus | 48.94 | 78.23 |
| PGSC0003DMT400087890 | Potato | cytosol | 37.02 | 77.68 |
| PGSC0003DMT400095417 | Potato | cytosol | 41.7 | 76.56 |
| PGSC0003DMT400086447 | Potato | cytosol | 46.81 | 57.29 |
| PGSC0003DMT400061726 | Potato | nucleus | 75.74 | 54.43 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 78.72 | 48.3 |
| PGSC0003DMT400089787 | Potato | cytosol | 33.19 | 44.83 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 7.23 | 41.46 |
| PGSC0003DMT400089454 | Potato | nucleus | 42.98 | 41.22 |
| PGSC0003DMT400003073 | Potato | cytosol | 18.3 | 39.81 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 46.81 | 39.01 |
| PGSC0003DMT400073719 | Potato | nucleus | 37.45 | 33.72 |
| PGSC0003DMT400095062 | Potato | nucleus | 34.89 | 29.08 |
| PGSC0003DMT400085256 | Potato | nucleus | 45.96 | 28.57 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 19.57 | 28.05 |
| PGSC0003DMT400088008 | Potato | nucleus | 22.98 | 27.98 |
| PGSC0003DMT400077258 | Potato | nucleus | 45.96 | 27.69 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 19.15 | 27.61 |
| PGSC0003DMT400088654 | Potato | nucleus | 38.3 | 27.52 |
| Bra012335.1-P | Field mustard | mitochondrion | 18.72 | 27.16 |
| Bra024521.1-P | Field mustard | mitochondrion | 18.72 | 27.16 |
| CDY04801 | Canola | mitochondrion, nucleus | 18.72 | 27.16 |
| CDY21372 | Canola | mitochondrion | 18.72 | 27.16 |
| CDY25744 | Canola | mitochondrion | 18.72 | 27.16 |
| PGSC0003DMT400095755 | Potato | nucleus | 39.15 | 26.74 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 17.45 | 26.28 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 20.85 | 25.65 |
| PGSC0003DMT400090516 | Potato | nucleus | 19.15 | 25.42 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 20.0 | 25.41 |
| PGSC0003DMT400088489 | Potato | nucleus | 22.98 | 25.35 |
| PGSC0003DMT400090953 | Potato | nucleus | 36.17 | 25.3 |
| PGSC0003DMT400091650 | Potato | nucleus | 27.66 | 25.1 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 19.57 | 24.86 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 8.94 | 24.71 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 19.15 | 24.46 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 18.72 | 23.78 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 35.32 | 23.78 |
| PGSC0003DMT400085623 | Potato | nucleus | 20.0 | 23.5 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 21.28 | 22.62 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 18.72 | 22.56 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 17.87 | 22.11 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 17.45 | 21.81 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 21.28 | 21.74 |
| Os03t0582400-01 | Rice | nucleus | 22.98 | 21.69 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 18.3 | 21.39 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 19.15 | 21.33 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 17.87 | 21.11 |
| KXG28892 | Sorghum | nucleus | 16.6 | 21.08 |
| PGSC0003DMT400065010 | Potato | vacuole | 17.87 | 21.0 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 20.43 | 20.96 |
| EES10067 | Sorghum | mitochondrion | 18.3 | 20.87 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 20.43 | 20.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.43 | 20.6 |
| OQU83806 | Sorghum | nucleus | 15.32 | 20.57 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 16.6 | 20.42 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 21.28 | 20.41 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 21.28 | 20.41 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 20.43 | 20.34 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 20.85 | 20.33 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 20.85 | 20.33 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 19.57 | 20.26 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 19.57 | 20.26 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 19.57 | 19.83 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 19.15 | 19.82 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 17.02 | 19.51 |
| PGSC0003DMT400086919 | Potato | nucleus | 20.43 | 19.51 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 18.72 | 19.38 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 20.43 | 19.35 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 21.28 | 19.23 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 19.15 | 19.23 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 20.0 | 19.18 |
| TraesCS7D01G548500.1 | Wheat | plastid | 19.15 | 19.15 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 20.43 | 19.12 |
| PGSC0003DMT400094113 | Potato | cytosol | 14.04 | 19.08 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 19.15 | 19.07 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 18.3 | 18.94 |
| EES06917 | Sorghum | mitochondrion, nucleus | 20.85 | 18.92 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 18.72 | 18.8 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 20.85 | 18.77 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 20.85 | 18.77 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 20.0 | 18.73 |
| OQU83804 | Sorghum | mitochondrion | 18.72 | 18.72 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 19.15 | 18.67 |
| KXG32310 | Sorghum | nucleus | 19.15 | 18.59 |
| PGSC0003DMT400094378 | Potato | nucleus | 12.34 | 18.59 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 16.6 | 18.48 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 18.72 | 18.26 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 20.0 | 18.01 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 21.28 | 17.99 |
| KXG28893 | Sorghum | nucleus | 12.77 | 17.86 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 18.3 | 17.84 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 15.74 | 17.45 |
| Zm00001d016791_P001 | Maize | mitochondrion | 21.28 | 17.42 |
| Zm00001d048894_P001 | Maize | mitochondrion | 17.87 | 17.0 |
| EER91288 | Sorghum | mitochondrion, nucleus | 22.55 | 16.88 |
| KXG28889 | Sorghum | nucleus | 17.87 | 16.8 |
| KXG28890 | Sorghum | mitochondrion | 17.87 | 16.47 |
| KXG28888 | Sorghum | nucleus | 17.45 | 16.08 |
| KXG38099 | Sorghum | plastid | 21.28 | 15.87 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 20.85 | 15.65 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 20.0 | 15.02 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 19.15 | 14.56 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 18.3 | 13.87 |
| PGSC0003DMT400089615 | Potato | cytosol | 14.04 | 13.87 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 16.6 | 12.7 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 17.87 | 12.65 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 17.02 | 11.24 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 15.32 | 11.15 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 17.02 | 11.02 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 14.89 | 10.84 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 13.62 | 9.94 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 2.55 | 5.13 |
| PGSC0003DMT400091747 | Potato | plastid | 2.55 | 3.95 |
| PGSC0003DMT400061722 | Potato | plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:M1DKQ4 | PFAM:PF00319 |
| EnsemblPlantsGene:PGSC0003DMG400040157 | PGSC:PGSC0003DMG400040157 | EnsemblPlants:PGSC0003DMT400090586 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0002968CFA | : |
Description
MADS-box protein AGL35 [Source:PGSC_GENE;Acc:PGSC0003DMG400040157]
Coordinates
chr7:-:41201874..41202581
Molecular Weight (calculated)
26889.3 Da
IEP (calculated)
8.949
GRAVY (calculated)
-0.549
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRKKVKLAF IENNTERRVS YRNRQKKFLT KARELNSTLC DVELATFINS PYHKKPEVFS NHEATTSTFT KFEDLPEMDK SKNITTQEKQ IMKRINKIEN
101: ELEKVRKENK KMEFTNQMYG LLNGEEMPNS MHLEDLSDLN YVIIKSLKQI NDAIKAKTHE EGSTLNAPQT IVAPMDSGVT SFDMSWDPLL APVDAPVLSE
201: IPLLVTFTVP SGTNFERPRA PLNLVPVTSK FSTSF
101: ELEKVRKENK KMEFTNQMYG LLNGEEMPNS MHLEDLSDLN YVIIKSLKQI NDAIKAKTHE EGSTLNAPQT IVAPMDSGVT SFDMSWDPLL APVDAPVLSE
201: IPLLVTFTVP SGTNFERPRA PLNLVPVTSK FSTSF
001: MTRQKVKMTF IENETARKST FKKRKKGLLK KAQELGILCG VPIFAVVNSP YELNPEVWPS REAANQVVSQ WKTMSVMDKT KKMVNQETFL QQRITKATES
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
Arabidopsis Description
MADS-box protein AGL35 [Source:UniProtKB/TrEMBL;Acc:Q7XJK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.