Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G128000.1 | Wheat | nucleus | 51.52 | 88.21 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 40.5 | 71.71 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 62.26 | 63.48 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 27.0 | 51.31 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 5.79 | 51.22 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 28.93 | 49.76 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 25.07 | 48.4 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 28.93 | 46.26 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 20.11 | 44.51 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 22.04 | 43.24 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 27.55 | 41.49 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 28.37 | 41.04 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 27.0 | 40.66 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 28.93 | 40.23 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 27.0 | 40.0 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 27.0 | 40.0 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 30.03 | 35.16 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 28.93 | 32.51 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 24.24 | 31.65 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 16.8 | 31.28 |
| EES06917 | Sorghum | mitochondrion, nucleus | 22.04 | 30.89 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 19.01 | 30.0 |
| Bra005166.1-P | Field mustard | mitochondrion, nucleus | 10.19 | 29.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.46 | 28.76 |
| Zm00001d016791_P001 | Maize | mitochondrion | 22.31 | 28.22 |
| KRG89836 | Soybean | nucleus | 11.57 | 28.19 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 17.36 | 27.16 |
| KRH33740 | Soybean | nucleus | 11.85 | 27.04 |
| EER91288 | Sorghum | mitochondrion, nucleus | 23.14 | 26.75 |
| KXG38099 | Sorghum | plastid | 23.14 | 26.67 |
| KRG88863 | Soybean | mitochondrion, nucleus | 10.19 | 26.43 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 17.08 | 26.27 |
| CDY64992 | Canola | mitochondrion, nucleus | 11.02 | 25.97 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 16.53 | 25.64 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 16.25 | 25.43 |
| KRH30476 | Soybean | nucleus | 10.47 | 25.33 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 11.29 | 25.15 |
| KRG98150 | Soybean | mitochondrion, nucleus | 11.57 | 25.15 |
| KRH30113 | Soybean | nucleus | 11.57 | 24.56 |
| KRH72060 | Soybean | nucleus | 11.57 | 24.56 |
| CDY33537 | Canola | nucleus | 13.22 | 24.49 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 16.25 | 24.08 |
| Bra012335.1-P | Field mustard | mitochondrion | 10.74 | 24.07 |
| Bra024521.1-P | Field mustard | mitochondrion | 10.74 | 24.07 |
| CDY04801 | Canola | mitochondrion, nucleus | 10.74 | 24.07 |
| CDY21372 | Canola | mitochondrion | 10.74 | 24.07 |
| CDY25744 | Canola | mitochondrion | 10.74 | 24.07 |
| KRH66114 | Soybean | nucleus | 12.95 | 23.74 |
| PGSC0003DMT400089787 | Potato | cytosol | 11.29 | 23.56 |
| KRG98149 | Soybean | nucleus | 13.77 | 23.47 |
| PGSC0003DMT400086956 | Potato | nucleus | 9.37 | 23.13 |
| KRG98152 | Soybean | nucleus | 11.85 | 22.63 |
| KRG97962 | Soybean | nucleus | 14.6 | 22.18 |
| Solyc01g102260.2.1 | Tomato | nucleus | 14.88 | 21.69 |
| AT5G26630.1 | Thale cress | nucleus | 12.95 | 21.56 |
| KRH30919 | Soybean | nucleus | 14.33 | 21.49 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 6.89 | 21.01 |
| KRH66052 | Soybean | mitochondrion, nucleus | 12.67 | 20.44 |
| KRG98143 | Soybean | nucleus | 11.85 | 20.38 |
| KRH30473 | Soybean | mitochondrion, nucleus | 12.4 | 20.36 |
| KRG88915 | Soybean | mitochondrion, nucleus | 11.57 | 20.29 |
| AT3G05860.1 | Thale cress | nucleus | 14.33 | 20.0 |
| Bra020555.1-P | Field mustard | nucleus | 11.85 | 19.91 |
| CDY05540 | Canola | nucleus | 11.85 | 19.91 |
| CDY25000 | Canola | nucleus | 11.85 | 19.91 |
| KRH30119 | Soybean | cytosol | 8.82 | 19.88 |
| CDY27735 | Canola | nucleus | 14.6 | 19.85 |
| CDX80580 | Canola | nucleus | 11.02 | 19.8 |
| KRH72066 | Soybean | mitochondrion, nucleus | 11.02 | 19.42 |
| Bra009913.1-P | Field mustard | nucleus | 10.74 | 19.21 |
| CDY71896 | Canola | nucleus | 9.09 | 19.19 |
| CDX88234 | Canola | nucleus | 9.64 | 19.13 |
| KRH30472 | Soybean | nucleus | 11.02 | 18.87 |
| PGSC0003DMT400073719 | Potato | nucleus | 13.5 | 18.77 |
| PGSC0003DMT400003073 | Potato | cytosol | 5.51 | 18.52 |
| KRG98148 | Soybean | nucleus | 11.57 | 18.34 |
| KRG98147 | Soybean | mitochondrion, nucleus | 12.95 | 18.29 |
| KRG98142 | Soybean | nucleus | 13.22 | 17.98 |
| Bra018490.1-P | Field mustard | nucleus | 14.33 | 17.93 |
| CDX97329 | Canola | nucleus | 14.33 | 17.93 |
| PGSC0003DMT400095062 | Potato | nucleus | 13.77 | 17.73 |
| Bra039404.1-P | Field mustard | nucleus | 14.6 | 17.55 |
| PGSC0003DMT400090586 | Potato | nucleus | 11.02 | 17.02 |
| AT1G65300.1 | Thale cress | nucleus | 12.95 | 16.91 |
| AT5G35120.1 | Thale cress | cytosol | 4.96 | 16.82 |
| CDY38696 | Canola | nucleus | 12.67 | 16.55 |
| AT1G65330.1 | Thale cress | nucleus | 12.67 | 16.49 |
| Bra029469.1-P | Field mustard | nucleus | 13.77 | 16.45 |
| CDY60402 | Canola | nucleus | 13.77 | 16.45 |
| CDX88231 | Canola | nucleus | 12.4 | 16.3 |
| Bra035448.1-P | Field mustard | nucleus | 11.85 | 16.29 |
| CDX80577 | Canola | mitochondrion, nucleus | 13.5 | 16.28 |
| PGSC0003DMT400088008 | Potato | nucleus | 8.54 | 16.06 |
| PGSC0003DMT400088489 | Potato | nucleus | 9.37 | 15.96 |
| Bra035449.1-P | Field mustard | nucleus | 11.57 | 15.91 |
| AT2G28700.1 | Thale cress | nucleus | 14.33 | 15.81 |
| PGSC0003DMT400088654 | Potato | nucleus | 13.77 | 15.29 |
| AT5G48670.1 | Thale cress | nucleus | 13.5 | 15.26 |
| AT5G27960.1 | Thale cress | nucleus | 13.22 | 15.0 |
| PGSC0003DMT400089454 | Potato | nucleus | 9.92 | 14.69 |
| PGSC0003DMT400061726 | Potato | nucleus | 13.22 | 14.68 |
| KRG88914 | Soybean | cytosol | 8.82 | 14.61 |
| CDY18830 | Canola | nucleus | 13.77 | 14.53 |
| AT1G59930.1 | Thale cress | cytosol | 5.23 | 14.39 |
| Bra020552.1-P | Field mustard | nucleus | 13.5 | 14.37 |
| PGSC0003DMT400090953 | Potato | nucleus | 13.22 | 14.29 |
| PGSC0003DMT400091650 | Potato | nucleus | 10.19 | 14.29 |
| PGSC0003DMT400095755 | Potato | nucleus | 13.5 | 14.24 |
| CDY71564 | Canola | nucleus | 13.22 | 14.16 |
| PGSC0003DMT400090516 | Potato | nucleus | 6.89 | 14.12 |
| CDY05207 | Canola | nucleus | 12.67 | 13.77 |
| AT5G26650.1 | Thale cress | nucleus | 13.77 | 13.66 |
| Bra041022.1-P | Field mustard | nucleus | 12.4 | 13.47 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 13.5 | 13.46 |
| KRG88862 | Soybean | nucleus | 11.57 | 13.42 |
| CDY27734 | Canola | nucleus | 12.4 | 13.39 |
| AT5G26580.1 | Thale cress | nucleus | 12.67 | 13.33 |
| PGSC0003DMT400077258 | Potato | nucleus | 14.33 | 13.33 |
| KRH30471 | Soybean | nucleus | 11.02 | 13.2 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 13.77 | 13.05 |
| AT1G31630.1 | Thale cress | mitochondrion | 12.12 | 12.98 |
| CDY05515 | Canola | nucleus | 13.22 | 12.73 |
| CDY05333 | Canola | nucleus | 12.95 | 12.47 |
| CDY70782 | Canola | nucleus | 11.02 | 12.38 |
| Bra040248.1-P | Field mustard | nucleus | 13.77 | 12.11 |
| Bra020524.1-P | Field mustard | nucleus | 11.85 | 11.94 |
| CDY05514 | Canola | nucleus | 11.85 | 11.94 |
| Bra020525.1-P | Field mustard | nucleus | 12.95 | 11.9 |
| KRG98146 | Soybean | nucleus | 10.74 | 11.89 |
| CDY67043 | Canola | nucleus | 12.67 | 11.76 |
| PGSC0003DMT400087890 | Potato | cytosol | 3.58 | 11.61 |
| Bra020550.1-P | Field mustard | nucleus | 12.12 | 11.58 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 10.74 | 11.17 |
| PGSC0003DMT400085256 | Potato | nucleus | 11.57 | 11.11 |
| AT1G31640.1 | Thale cress | mitochondrion | 14.05 | 10.99 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 4.68 | 10.43 |
| PGSC0003DMT400094113 | Potato | cytosol | 4.96 | 10.4 |
| PGSC0003DMT400085623 | Potato | nucleus | 5.51 | 10.0 |
| PGSC0003DMT400094378 | Potato | nucleus | 4.13 | 9.62 |
| PGSC0003DMT400086447 | Potato | cytosol | 4.96 | 9.38 |
| PGSC0003DMT400095417 | Potato | cytosol | 3.31 | 9.38 |
| PGSC0003DMT400086919 | Potato | nucleus | 6.34 | 9.35 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 6.06 | 7.8 |
| PGSC0003DMT400061722 | Potato | plastid | 2.2 | 7.69 |
| Solyc07g043080.1.1 | Tomato | cytosol | 2.48 | 7.26 |
| PGSC0003DMT400089615 | Potato | cytosol | 4.68 | 7.14 |
| PGSC0003DMT400091747 | Potato | plastid | 2.75 | 6.58 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 3.03 | 5.47 |
| PGSC0003DMT400065010 | Potato | vacuole | 2.75 | 5.0 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 1.38 | 4.27 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G146100.1 | EnsemblPlantsGene:TraesCS2B01G146100 | Gene3D:3.40.1810.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | ncoils:Coil | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 | PFAM:PF00319 | PFscan:PS50066 |
| SEG:seg | SMART:SM00432 | SUPFAM:SSF55455 | MapMan:15.5.14 | : | : |
Description
No Description!
Coordinates
chr2B:+:111926876..111927967
Molecular Weight (calculated)
40139.4 Da
IEP (calculated)
6.869
GRAVY (calculated)
-0.658
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRKKVPLRY IGEDSTRRRT YETRRNYLTK KVGELGILCN TKACVLVYDE GASEPYVYPS HAEAVEILNR YKAMPNMPQF KKTTSQEEFL TKCLAKLQHQ
101: ANKLQSERED RDIRALLHKA MLGGNLNAEE VASVGCTSGE IHQSLVERIA KTNPQLPVFQ PQVPYVTGGV NMGPPSMYQA SSQQQAGGQP SFFQPQAPYI
201: TGRANMGPSS MNQASPQQQA CGQPPLFQPQ AQYQAPPPQQ AGRQLSVFQP QAPYIAGSAD MGPPAMYQAP PHQQEGWKPP VFQPQAQYVT GSVDMGPPRM
301: YQALQQQEGW RNLVRSDEDH SALVYNGNGY STGGHDGVGT SSSASFPLDD MMSFLDDMEF ELS
101: ANKLQSERED RDIRALLHKA MLGGNLNAEE VASVGCTSGE IHQSLVERIA KTNPQLPVFQ PQVPYVTGGV NMGPPSMYQA SSQQQAGGQP SFFQPQAPYI
201: TGRANMGPSS MNQASPQQQA CGQPPLFQPQ AQYQAPPPQQ AGRQLSVFQP QAPYIAGSAD MGPPAMYQAP PHQQEGWKPP VFQPQAQYVT GSVDMGPPRM
301: YQALQQQEGW RNLVRSDEDH SALVYNGNGY STGGHDGVGT SSSASFPLDD MMSFLDDMEF ELS
001: MARKKLNLTY IFNDRMRKRS FKQRREGFLK KLNDLKVLCD VNACAVVYNP FNSNPDVWPS KSEVNNIIKK FEMLPETQKK VKSVNHEEFL NLYISKVEKQ
101: SKKLIVENKE TCLKEVMFKC LGGNMGDFVM NDNDRLDLCK FIDHYLRNLY HHKNVTLNNP NFEIGESSSL MDMAPTATTG NMATTVVDEG MTPLLIAEGS
201: SSSFLNSPLF NSPQLTNELQ LIVSQNHRLE NSLASNLFFS EGQDICIPDM NQSIIPSNQG AEHVDFLESN FLPNNNQEVY IPVMDQDEVY NPNQNHYENQ
301: QGFIDEMMKY AEKTSFPWMV ENHCYNHNQ
101: SKKLIVENKE TCLKEVMFKC LGGNMGDFVM NDNDRLDLCK FIDHYLRNLY HHKNVTLNNP NFEIGESSSL MDMAPTATTG NMATTVVDEG MTPLLIAEGS
201: SSSFLNSPLF NSPQLTNELQ LIVSQNHRLE NSLASNLFFS EGQDICIPDM NQSIIPSNQG AEHVDFLESN FLPNNNQEVY IPVMDQDEVY NPNQNHYENQ
301: QGFIDEMMKY AEKTSFPWMV ENHCYNHNQ
Arabidopsis Description
AGL46AGAMOUS-like 46 [Source:UniProtKB/TrEMBL;Acc:F4IIT6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.