Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P18410_001 | Banana | nucleus | 6.38 | 51.22 |
| CDY38696 | Canola | nucleus | 42.25 | 50.0 |
| Bra035448.1-P | Field mustard | nucleus | 38.91 | 48.48 |
| Bra035449.1-P | Field mustard | nucleus | 38.6 | 48.11 |
| AT3G05860.1 | Thale cress | nucleus | 34.35 | 43.46 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 11.85 | 32.77 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 7.9 | 30.59 |
| AT5G26630.1 | Thale cress | nucleus | 19.45 | 29.36 |
| KXG28892 | Sorghum | nucleus | 15.5 | 27.57 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 12.77 | 26.92 |
| OQU83806 | Sorghum | nucleus | 14.29 | 26.86 |
| KXG28893 | Sorghum | nucleus | 13.68 | 26.79 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 19.45 | 26.12 |
| PGSC0003DMT400003073 | Potato | cytosol | 8.51 | 25.93 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 12.77 | 25.61 |
| EES10067 | Sorghum | mitochondrion | 15.81 | 25.24 |
| AT5G35120.1 | Thale cress | cytosol | 8.21 | 25.23 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 16.72 | 24.89 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 13.98 | 24.86 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 13.98 | 24.86 |
| AT1G65300.1 | Thale cress | nucleus | 20.97 | 24.82 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 17.33 | 24.78 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 13.68 | 24.32 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 13.98 | 24.08 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.02 | 24.03 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 13.37 | 23.91 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 14.89 | 23.9 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 16.72 | 23.71 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 13.68 | 23.56 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 17.93 | 23.51 |
| AT1G65330.1 | Thale cress | nucleus | 19.76 | 23.3 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 13.37 | 23.16 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 16.41 | 23.08 |
| TraesCS7D01G548500.1 | Wheat | plastid | 16.41 | 22.98 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 16.11 | 22.84 |
| AT5G48670.1 | Thale cress | nucleus | 22.19 | 22.74 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 16.11 | 22.65 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 13.37 | 22.56 |
| OQU83804 | Sorghum | mitochondrion | 16.11 | 22.55 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 15.5 | 22.47 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 16.72 | 22.45 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 16.72 | 22.45 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 14.29 | 22.27 |
| Zm00001d048894_P001 | Maize | mitochondrion | 16.72 | 22.27 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 14.29 | 22.17 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 13.37 | 22.11 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 15.81 | 22.03 |
| KXG28889 | Sorghum | nucleus | 16.72 | 22.0 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 16.11 | 21.99 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 16.11 | 21.99 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 16.72 | 21.91 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 12.46 | 21.81 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 13.98 | 21.8 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 14.89 | 21.59 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 14.89 | 21.59 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 18.24 | 21.58 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 10.64 | 21.47 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 14.89 | 21.4 |
| AT5G27960.1 | Thale cress | nucleus | 20.67 | 21.25 |
| KXG28890 | Sorghum | mitochondrion | 16.41 | 21.18 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 14.59 | 21.15 |
| KXG28888 | Sorghum | nucleus | 16.11 | 20.78 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 15.2 | 20.75 |
| AT1G31630.1 | Thale cress | mitochondrion | 21.28 | 20.65 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 15.5 | 20.56 |
| Os03t0582400-01 | Rice | nucleus | 15.5 | 20.48 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 16.11 | 20.38 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 14.59 | 20.34 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 14.89 | 20.33 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 14.89 | 20.33 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 16.11 | 20.31 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 16.11 | 20.31 |
| KXG32310 | Sorghum | nucleus | 14.89 | 20.25 |
| Zm00001d016791_P001 | Maize | mitochondrion | 17.63 | 20.21 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 15.81 | 19.92 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 13.68 | 19.82 |
| AT1G59930.1 | Thale cress | cytosol | 7.9 | 19.7 |
| EES06917 | Sorghum | mitochondrion, nucleus | 15.5 | 19.69 |
| KXG38099 | Sorghum | plastid | 18.84 | 19.68 |
| AT5G26650.1 | Thale cress | nucleus | 21.28 | 19.13 |
| AT5G26580.1 | Thale cress | nucleus | 19.76 | 18.84 |
| EER91288 | Sorghum | mitochondrion, nucleus | 17.63 | 18.47 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 17.63 | 17.96 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 17.33 | 17.7 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 17.02 | 17.34 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 15.2 | 16.29 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 14.59 | 15.34 |
| AT1G31640.1 | Thale cress | mitochondrion | 21.58 | 15.3 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 14.29 | 15.02 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 13.68 | 14.56 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 15.81 | 14.33 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 13.37 | 14.19 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 15.2 | 14.04 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 13.37 | 13.25 |
| PGSC0003DMT400089615 | Potato | cytosol | 3.95 | 5.46 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:817419 | UniProt:A0A178VYD3 | ProteinID:AEC08161.1 | Symbol:AGL46 |
| ArrayExpress:AT2G28700 | EnsemblPlantsGene:AT2G28700 | RefSeq:AT2G28700 | TAIR:AT2G28700 | RefSeq:AT2G28700-TAIR-G | EnsemblPlants:AT2G28700.1 |
| TAIR:AT2G28700.1 | Unigene:At.38580 | UniProt:F4IIT6 | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 |
| InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like | RefSeq:NP_180438.2 | ProteinID:OAP10471.1 | PFAM:PF00319 |
| PO:PO:0009089 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000034EDB9 | SEG:seg | : | : |
Description
AGL46AGAMOUS-like 46 [Source:UniProtKB/TrEMBL;Acc:F4IIT6]
Coordinates
chr2:-:12317166..12318790
Molecular Weight (calculated)
38022.2 Da
IEP (calculated)
5.620
GRAVY (calculated)
-0.575
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MARKKLNLTY IFNDRMRKRS FKQRREGFLK KLNDLKVLCD VNACAVVYNP FNSNPDVWPS KSEVNNIIKK FEMLPETQKK VKSVNHEEFL NLYISKVEKQ
101: SKKLIVENKE TCLKEVMFKC LGGNMGDFVM NDNDRLDLCK FIDHYLRNLY HHKNVTLNNP NFEIGESSSL MDMAPTATTG NMATTVVDEG MTPLLIAEGS
201: SSSFLNSPLF NSPQLTNELQ LIVSQNHRLE NSLASNLFFS EGQDICIPDM NQSIIPSNQG AEHVDFLESN FLPNNNQEVY IPVMDQDEVY NPNQNHYENQ
301: QGFIDEMMKY AEKTSFPWMV ENHCYNHNQ
101: SKKLIVENKE TCLKEVMFKC LGGNMGDFVM NDNDRLDLCK FIDHYLRNLY HHKNVTLNNP NFEIGESSSL MDMAPTATTG NMATTVVDEG MTPLLIAEGS
201: SSSFLNSPLF NSPQLTNELQ LIVSQNHRLE NSLASNLFFS EGQDICIPDM NQSIIPSNQG AEHVDFLESN FLPNNNQEVY IPVMDQDEVY NPNQNHYENQ
301: QGFIDEMMKY AEKTSFPWMV ENHCYNHNQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.