Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G35120.1 | Thale cress | cytosol | 69.7 | 85.98 |
| AT1G65300.1 | Thale cress | nucleus | 51.52 | 24.46 |
| AT1G65330.1 | Thale cress | nucleus | 49.24 | 23.3 |
| PGSC0003DMT400003073 | Potato | cytosol | 14.39 | 17.59 |
| AT5G27960.1 | Thale cress | nucleus | 42.42 | 17.5 |
| CDY71896 | Canola | nucleus | 20.45 | 15.7 |
| AT5G26630.1 | Thale cress | nucleus | 25.76 | 15.6 |
| AT5G26650.1 | Thale cress | nucleus | 42.42 | 15.3 |
| AT5G26580.1 | Thale cress | nucleus | 39.39 | 15.07 |
| AT1G31630.1 | Thale cress | mitochondrion | 37.88 | 14.75 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 18.18 | 14.63 |
| CDX80577 | Canola | mitochondrion, nucleus | 31.82 | 13.95 |
| CDX88231 | Canola | nucleus | 28.79 | 13.77 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 11.36 | 12.61 |
| CDY70782 | Canola | nucleus | 30.3 | 12.38 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 21.21 | 12.33 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 14.39 | 12.18 |
| CDY71564 | Canola | nucleus | 31.06 | 12.09 |
| Bra020552.1-P | Field mustard | nucleus | 31.06 | 12.02 |
| KXG28893 | Sorghum | nucleus | 15.15 | 11.9 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 19.7 | 11.45 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 21.21 | 11.43 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 21.21 | 11.43 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 15.91 | 11.35 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 15.91 | 11.35 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 18.94 | 11.31 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 20.45 | 11.2 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 15.91 | 10.99 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 15.15 | 10.87 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 15.15 | 10.81 |
| KXG28892 | Sorghum | nucleus | 15.15 | 10.81 |
| Bra020550.1-P | Field mustard | nucleus | 31.06 | 10.79 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 19.7 | 10.79 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 18.94 | 10.78 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.94 | 10.73 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 29.55 | 10.71 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 15.15 | 10.64 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 18.94 | 10.59 |
| AT1G31640.1 | Thale cress | mitochondrion | 37.12 | 10.56 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 18.18 | 10.34 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 15.15 | 10.26 |
| CDY67043 | Canola | nucleus | 30.3 | 10.23 |
| EES10067 | Sorghum | mitochondrion | 15.91 | 10.19 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 18.94 | 10.08 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 17.42 | 10.04 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 17.42 | 10.0 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 14.39 | 10.0 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 14.39 | 9.95 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 16.67 | 9.69 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 16.67 | 9.69 |
| AT5G48670.1 | Thale cress | nucleus | 23.48 | 9.66 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 14.39 | 9.55 |
| KXG32310 | Sorghum | nucleus | 17.42 | 9.5 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 15.15 | 9.48 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 15.15 | 9.48 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 19.7 | 9.35 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 16.67 | 9.32 |
| Zm00001d048894_P001 | Maize | mitochondrion | 17.42 | 9.31 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 14.39 | 9.27 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 15.91 | 9.25 |
| KXG28888 | Sorghum | nucleus | 17.42 | 9.02 |
| TraesCS7D01G548500.1 | Wheat | plastid | 15.91 | 8.94 |
| EES06917 | Sorghum | mitochondrion, nucleus | 17.42 | 8.88 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 17.42 | 8.85 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 17.42 | 8.81 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 17.42 | 8.81 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 17.42 | 8.81 |
| KXG28889 | Sorghum | nucleus | 16.67 | 8.8 |
| Zm00001d016791_P001 | Maize | mitochondrion | 18.94 | 8.71 |
| KXG28890 | Sorghum | mitochondrion | 16.67 | 8.63 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 10.61 | 8.59 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 15.91 | 8.57 |
| OQU83806 | Sorghum | nucleus | 11.36 | 8.57 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 15.15 | 8.55 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 15.15 | 8.55 |
| OQU83804 | Sorghum | mitochondrion | 15.15 | 8.51 |
| Os03t0582400-01 | Rice | nucleus | 15.91 | 8.43 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 15.91 | 8.37 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 15.91 | 8.37 |
| Bra020524.1-P | Field mustard | nucleus | 22.73 | 8.33 |
| CDY05514 | Canola | nucleus | 22.73 | 8.33 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 15.15 | 8.3 |
| CDY05333 | Canola | nucleus | 23.48 | 8.22 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 12.88 | 8.02 |
| CDY05515 | Canola | nucleus | 22.73 | 7.96 |
| KXG38099 | Sorghum | plastid | 18.94 | 7.94 |
| AT2G28700.1 | Thale cress | nucleus | 19.7 | 7.9 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 14.39 | 7.88 |
| AT3G05860.1 | Thale cress | nucleus | 15.15 | 7.69 |
| Bra020525.1-P | Field mustard | nucleus | 21.97 | 7.34 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 16.67 | 7.12 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 12.88 | 7.05 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 17.42 | 6.93 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 15.91 | 6.71 |
| EER91288 | Sorghum | mitochondrion, nucleus | 15.91 | 6.69 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 15.15 | 6.45 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 14.39 | 6.07 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 14.39 | 5.88 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 13.64 | 5.86 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 13.64 | 5.59 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 13.64 | 5.57 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 14.39 | 5.23 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 13.64 | 5.06 |
| PGSC0003DMT400089615 | Potato | cytosol | 3.79 | 2.1 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 0.76 | 1.18 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:AT1G59930 | EMBL:AB493510 | EnsemblPlants:AT1G59930.1 | EnsemblPlantsGene:AT1G59930 | EntrezGene:842287 | GO:GO:0008150 |
| ncoils:Coil | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | PO:PO:0000293 | PO:PO:0007123 | PO:PO:0009025 |
| PO:PO:0025022 | ProteinID:AAD39338.1 | ProteinID:AEE33641.1 | RefSeq:AT1G59930 | RefSeq:AT1G59930-TAIR-G | RefSeq:NP_176201.1 |
| TAIR:AT1G59930 | TAIR:AT1G59930.1 | UniParc:UPI00000A0C97 | UniProt:Q9SXC1 | MapMan:35.1 | : |
Description
F23H11.24 protein [Source:UniProtKB/TrEMBL;Acc:Q9SXC1]
Coordinates
chr1:-:22060924..22061516
Molecular Weight (calculated)
14869.4 Da
IEP (calculated)
4.393
GRAVY (calculated)
-0.709
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQEAFLRER IEKAQAQLQK LRDENRVLRA RQIMWGCIEG TIDVCQLGEK DLQDLSSVID DYLDSLKSRI EYLKKNGEPS SSLPPRVLQD LNVEEDGDIP
101: SMDGSHHQSE TNRLATITTT ADACAPNITN NP
101: SMDGSHHQSE TNRLATITTT ADACAPNITN NP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.