Factsheet for Bra020525.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000392.1-P
Bra002480.1-P
Bra002611.1-P
Bra004007.1-P
Bra004361.1-P
Bra004927.1-P
Bra007829.1-P
Bra009436.1-P
Bra009911.1-P
Bra011938.1-P
Bra015643.1-P
Bra017376.1-P
Bra018296.1-P
Bra020242.1-P
Bra020245.1-P
Bra020246.1-P
Bra020247.1-P
Bra020524.1-P
Bra020525.1-P
Bra020550.1-P
Bra020552.1-P
Bra020600.1-P
Bra022341.1-P
Bra025126.1-P
Bra026543.1-P
Bra031864.1-P
Bra032057.1-P
Bra033467.1-P
Bra035685.1-P
Bra037571.1-P
Bra038326.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31630.1	Bra011938.1-P	AT1G01530.1	15805477
AT1G31630.1	Bra035685.1-P	AT1G01530.1	15805477
AT1G31630.1	Bra011938.1-P	AT1G65360.1	15805477
AT1G31630.1	Bra035685.1-P	AT1G65360.1	15805477
AT1G31630.1	Bra004007.1-P	AT1G69120.1	15805477
AT1G31630.1	Bra004361.1-P	AT1G69120.1	15805477
AT1G31630.1	Bra038326.1-P	AT1G69120.1	15805477
AT1G31630.1	Bra017376.1-P	AT2G03710.1	15805477
AT1G31630.1	Bra025126.1-P	AT2G03710.1	15805477
AT1G31630.1	Bra026543.1-P	AT2G03710.1	15805477
AT1G31630.1	Bra007829.1-P	AT2G24840.1	18713950
AT1G31630.1	Bra032057.1-P	AT2G24840.1	18713950
AT1G31630.1	Bra000392.1-P	AT2G45650.1	15805477
AT1G31630.1	Bra004927.1-P	AT2G45650.1	15805477
AT1G31630.1	Bra011938.1-P	AT4G36590.1	15805477
AT1G31630.1	Bra035685.1-P	AT4G36590.1	15805477
AT1G31630.1	Bra009911.1-P	AT5G27960.1	15805477
AT1G31630.1	Bra020524.1-P	AT5G27960.1	15805477
AT1G31630.1	Bra020525.1-P	AT5G27960.1	15805477
AT1G31630.1	Bra020550.1-P	AT5G27960.1	15805477
AT1G31630.1	Bra020552.1-P	AT5G27960.1	15805477
AT1G31630.1	Bra002611.1-P	AT5G58890.1	15805477
AT1G31630.1	Bra002480.1-P	AT5G60440.1	15805477
AT1G31630.1	Bra020242.1-P	AT5G60440.1	15805477
AT1G31630.1	Bra020245.1-P	AT5G60440.1	15805477
AT1G31630.1	Bra020246.1-P	AT5G60440.1	15805477
AT1G31630.1	Bra020247.1-P	AT5G60440.1	15805477
AT1G31640.1	Bra011938.1-P	AT1G65360.1	15805477
AT1G31640.1	Bra035685.1-P	AT1G65360.1	15805477
AT1G31640.1	Bra004007.1-P	AT1G69120.1	15805477
AT1G31640.1	Bra004361.1-P	AT1G69120.1	15805477
AT1G31640.1	Bra038326.1-P	AT1G69120.1	15805477
AT1G31640.1	Bra017376.1-P	AT2G03710.1	15805477
AT1G31640.1	Bra025126.1-P	AT2G03710.1	15805477
AT1G31640.1	Bra026543.1-P	AT2G03710.1	15805477
AT1G31640.1	Bra000392.1-P	AT2G45650.1	15805477
AT1G31640.1	Bra004927.1-P	AT2G45650.1	15805477
AT1G31640.1	Bra022341.1-P	AT3G18650.1	15805477
AT1G31640.1	Bra037571.1-P	AT3G18650.1	15805477
AT1G31640.1	Bra009911.1-P	AT5G27960.1	15805477
AT1G31640.1	Bra020524.1-P	AT5G27960.1	15805477
AT1G31640.1	Bra020525.1-P	AT5G27960.1	15805477
AT1G31640.1	Bra020550.1-P	AT5G27960.1	15805477
AT1G31640.1	Bra020552.1-P	AT5G27960.1	15805477
AT1G31640.1	Bra002480.1-P	AT5G60440.1	15805477
AT1G31640.1	Bra020242.1-P	AT5G60440.1	15805477
AT1G31640.1	Bra020245.1-P	AT5G60440.1	15805477
AT1G31640.1	Bra020246.1-P	AT5G60440.1	15805477
AT1G31640.1	Bra020247.1-P	AT5G60440.1	15805477
AT1G31640.1	Bra031864.1-P	AT5G65330.1	15805477
AT1G65300.1	Bra011938.1-P	AT1G01530.1	15805477
AT1G65300.1	Bra035685.1-P	AT1G01530.1	15805477
AT1G65300.1	Bra007829.1-P	AT2G24840.1	18713950
AT1G65300.1	Bra032057.1-P	AT2G24840.1	18713950
AT1G65300.1	Bra018296.1-P	AT3G51920.1	17360592
AT1G65300.1	Bra033467.1-P	AT3G51920.1	17360592
AT1G65300.1	Bra011938.1-P	AT4G36590.1	15805477
AT1G65300.1	Bra035685.1-P	AT4G36590.1	15805477
AT1G65300.1	Bra002480.1-P	AT5G60440.1	15805477
AT1G65300.1	Bra020242.1-P	AT5G60440.1	15805477
AT1G65300.1	Bra020245.1-P	AT5G60440.1	15805477
AT1G65300.1	Bra020246.1-P	AT5G60440.1	15805477
AT1G65300.1	Bra020247.1-P	AT5G60440.1	15805477
AT1G65330.1	Bra011938.1-P	AT1G01530.1	15805477
AT1G65330.1	Bra035685.1-P	AT1G01530.1	15805477
AT1G65330.1	Bra009436.1-P	AT1G46408.1	15805477
AT1G65330.1	Bra007829.1-P	AT2G24840.1	18713950
AT1G65330.1	Bra032057.1-P	AT2G24840.1	18713950
AT1G65330.1	Bra011938.1-P	AT4G36590.1	15805477
AT1G65330.1	Bra035685.1-P	AT4G36590.1	15805477
AT1G65330.1	Bra009436.1-P	AT5G04640.1	15805477
AT1G65330.1	Bra020600.1-P	AT5G27130.1	15805477
AT1G65330.1	Bra002480.1-P	AT5G60440.1	15805477
AT1G65330.1	Bra020242.1-P	AT5G60440.1	15805477
AT1G65330.1	Bra020245.1-P	AT5G60440.1	15805477
AT1G65330.1	Bra020246.1-P	AT5G60440.1	15805477
AT1G65330.1	Bra020247.1-P	AT5G60440.1	15805477
AT5G26650.1	Bra011938.1-P	AT1G01530.1	15805477
AT5G26650.1	Bra035685.1-P	AT1G01530.1	15805477
AT5G26650.1	Bra002480.1-P	AT5G60440.1	15805477
AT5G26650.1	Bra020242.1-P	AT5G60440.1	15805477
AT5G26650.1	Bra020245.1-P	AT5G60440.1	15805477
AT5G26650.1	Bra020246.1-P	AT5G60440.1	15805477
AT5G26650.1	Bra020247.1-P	AT5G60440.1	15805477
AT5G27960.1	Bra009911.1-P	AT1G31630.1	15805477
AT5G27960.1	Bra020524.1-P	AT1G31630.1	15805477
AT5G27960.1	Bra020525.1-P	AT1G31630.1	15805477
AT5G27960.1	Bra020550.1-P	AT1G31630.1	15805477
AT5G27960.1	Bra020552.1-P	AT1G31630.1	15805477
AT5G27960.1	Bra009911.1-P	AT1G31640.1	15805477
AT5G27960.1	Bra020524.1-P	AT1G31640.1	15805477
AT5G27960.1	Bra020525.1-P	AT1G31640.1	15805477
AT5G27960.1	Bra020550.1-P	AT1G31640.1	15805477
AT5G27960.1	Bra020552.1-P	AT1G31640.1	15805477
AT5G27960.1	Bra009436.1-P	AT1G46408.1	15805477
AT5G27960.1	Bra020600.1-P	AT1G48150.1	15805477
AT5G27960.1	Bra015643.1-P	AT1G77980.1	15805477
AT5G27960.1	Bra011938.1-P	AT4G36590.1	15805477
AT5G27960.1	Bra035685.1-P	AT4G36590.1	15805477
AT5G27960.1	Bra002480.1-P	AT5G60440.1	15805477
AT5G27960.1	Bra020242.1-P	AT5G60440.1	15805477
AT5G27960.1	Bra020245.1-P	AT5G60440.1	15805477
AT5G27960.1	Bra020246.1-P	AT5G60440.1	15805477
AT5G27960.1	Bra020247.1-P	AT5G60440.1	15805477

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05515	Canola	nucleus	95.19	99.73
Bra020524.1-P	Field mustard	nucleus	74.68	81.94
Bra020550.1-P	Field mustard	nucleus	63.04	65.53
Bra020552.1-P	Field mustard	nucleus	55.7	64.52
GSMUA_Achr2P18410_001	Banana	nucleus	5.32	51.22
Bra009911.1-P	Field mustard	mitochondrion, nucleus	37.72	40.93
AT5G27960.1	Thale cress	nucleus	26.84	33.12
AT1G65330.1	Thale cress	nucleus	23.04	32.62
AT5G26650.1	Thale cress	nucleus	30.13	32.51
AT1G65300.1	Thale cress	nucleus	22.28	31.65
Bra005166.1-P	Field mustard	mitochondrion, nucleus	9.87	31.2
AT5G26580.1	Thale cress	nucleus	27.09	31.01
Bra020555.1-P	Field mustard	nucleus	16.71	30.56
AT1G31630.1	Thale cress	mitochondrion	26.08	30.38
Bra009913.1-P	Field mustard	nucleus	14.68	28.57
HORVU6Hr1G003730.1	Barley	nucleus	6.08	28.24
OQU83806	Sorghum	nucleus	12.41	28.0
KXG28892	Sorghum	nucleus	12.91	27.57
KXG28893	Sorghum	nucleus	11.65	27.38
AT1G31640.1	Thale cress	mitochondrion	30.89	26.29
TraesCS3D01G138400.1	Wheat	cytosol	12.41	25.79
EES10067	Sorghum	mitochondrion	13.42	25.73
TraesCS3B01G155200.1	Wheat	cytosol	12.41	25.13
TraesCS6A01G020500.1	Wheat	mitochondrion, nucleus	9.87	25.0
GSMUA_Achr3P05500_001	Banana	nucleus	13.92	24.89
HORVU7Hr1G121600.1	Barley	nucleus	11.65	24.86
GSMUA_AchrUn_...	Banana	nucleus	14.43	24.46
GSMUA_Achr3P08500_001	Banana	nucleus	14.18	24.35
AT5G35120.1	Thale cress	cytosol	6.58	24.3
Zm00001d048894_P001	Maize	mitochondrion	15.19	24.29
Bra041022.1-P	Field mustard	nucleus	20.51	24.25
TraesCS7B01G484600.1	Wheat	nucleus	9.87	23.78
Bra029469.1-P	Field mustard	nucleus	18.23	23.68
TraesCS3A01G137500.1	Wheat	cytosol	11.9	23.62
Bra012335.1-P	Field mustard	mitochondrion	9.62	23.46
Bra018490.1-P	Field mustard	nucleus	17.22	23.45
TraesCS6D01G024000.1	Wheat	mitochondrion, nucleus	10.89	23.37
GSMUA_Achr3P24560_001	Banana	nucleus	13.67	23.28
GSMUA_Achr8P06150_001	Banana	nucleus	14.43	23.27
KXG28889	Sorghum	nucleus	14.68	23.2
TraesCS6B01G028100.1	Wheat	mitochondrion	10.89	22.87
TraesCS6A01G020900.1	Wheat	mitochondrion	12.15	22.75
TraesCS7D01G548500.1	Wheat	plastid	13.42	22.55
TraesCS7A01G559500.1	Wheat	nucleus	10.89	22.51
TraesCS6D01G024300.1	Wheat	mitochondrion	12.91	22.47
GSMUA_Achr2P18400_001	Banana	nucleus	13.16	22.41
KXG32310	Sorghum	nucleus	13.67	22.31
TraesCS6B01G028300.1	Wheat	mitochondrion	11.9	22.27
Bra039404.1-P	Field mustard	nucleus	16.96	22.19
TraesCS7D01G550500.1	Wheat	nucleus	10.38	22.16
TraesCS6A01G022700.1	Wheat	mitochondrion	12.66	22.03
TraesCS6B01G027900.1	Wheat	nucleus	12.66	22.03
AT1G59930.1	Thale cress	cytosol	7.34	21.97
TraesCS7A01G561000.1	Wheat	nucleus	12.91	21.79
TraesCS7B01G485400.1	Wheat	nucleus	12.91	21.79
EES06917	Sorghum	mitochondrion, nucleus	14.18	21.62
TraesCS6D01G023800.1	Wheat	mitochondrion	12.41	21.59
TraesCS3B01G159600.1	Wheat	nucleus	13.67	21.51
PGSC0003DMT400003073	Potato	cytosol	5.82	21.3
HORVU2Hr1G022060.1	Barley	nucleus, plastid	10.89	20.98
HORVU6Hr1G085540.1	Barley	mitochondrion	12.15	20.96
Os03t0582400-01	Rice	nucleus	13.16	20.88
OQU83804	Sorghum	mitochondrion	12.41	20.85
TraesCS7B01G484000.1	Wheat	nucleus	9.62	20.54
TraesCS6B01G391600.1	Wheat	nucleus	12.66	20.41
TraesCS6B01G391700.1	Wheat	nucleus	12.66	20.41
KXG28890	Sorghum	mitochondrion	13.16	20.39
TraesCS6D01G342000.1	Wheat	nucleus	12.41	20.33
TraesCS3A01G312600.1	Wheat	nucleus	12.91	20.32
Zm00001d013792_P001	Maize	mitochondrion, nucleus	14.18	20.14
Bra035448.1-P	Field mustard	nucleus	13.42	20.08
KXG28888	Sorghum	nucleus	12.91	20.0
Bra024521.1-P	Field mustard	mitochondrion	8.1	19.75
TraesCS6A01G359100.1	Wheat	mitochondrion	12.91	19.54
TraesCS6B01G391800.1	Wheat	mitochondrion	12.91	19.54
Zm00001d016791_P001	Maize	mitochondrion	14.18	19.51
TraesCS6D01G341700.1	Wheat	nucleus	11.9	19.5
Bra035449.1-P	Field mustard	nucleus	12.91	19.32
TraesCS6D01G342100.1	Wheat	mitochondrion	12.66	19.16
TraesCS6A01G358900.1	Wheat	nucleus	11.39	19.07
TraesCS2B01G171700.1	Wheat	mitochondrion	9.11	18.85
TraesCS6D01G341800.1	Wheat	mitochondrion, nucleus	11.65	18.55
HORVU6Hr1G085570.1	Barley	mitochondrion, nucleus	12.15	18.46
TraesCS7D01G551000.1	Wheat	nucleus	10.89	18.22
TraesCS6A01G359700.1	Wheat	nucleus	10.38	18.06
TraesCS7D01G550600.1	Wheat	nucleus	10.89	17.84
KXG38099	Sorghum	plastid	13.67	17.14
TraesCS7B01G484100.1	Wheat	mitochondrion, nucleus	10.38	17.01
TraesCS7B01G484500.1	Wheat	nucleus	10.38	17.01
EER91288	Sorghum	mitochondrion, nucleus	12.91	16.24
TraesCS2D01G128000.1	Wheat	nucleus	8.35	15.57
Bra040248.1-P	Field mustard	nucleus	16.2	15.5
TraesCS7A01G551000.1	Wheat	nucleus	11.9	15.02
TraesCS7D01G536700.1	Wheat	nucleus	11.65	14.7
TraesCS2D01G150900.1	Wheat	mitochondrion	11.14	14.33
TraesCS6D01G342700.1	Wheat	nucleus	11.14	14.24
TraesCS7B01G299400.1	Wheat	nucleus	11.39	13.93
TraesCS7A01G398800.1	Wheat	nucleus	11.14	13.66
TraesCS7D01G393000.1	Wheat	nucleus	11.14	13.62
TraesCS6B01G392600.1	Wheat	nucleus	10.63	13.55
TraesCS2B01G146100.1	Wheat	nucleus	11.9	12.95
TraesCS2A01G146400.1	Wheat	mitochondrion	11.39	12.64
HORVU6Hr1G085670.1	Barley	nucleus	9.87	11.75
PGSC0003DMT400089615	Potato	cytosol	5.57	9.24

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EnsemblPlantsGene:Bra020525	EnsemblPlants:Bra020525.1	EnsemblPlants:Bra020525.1-P	ncoils:Coil
GO:GO:0000982	GO:GO:0000987	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045944	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879	UniProt:M4DVI1
InterPro:MADS_SRF-like	PFAM:PF00319	PRINTS:PR00404	PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF355
SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI0002546E69	SEG:seg

Description

AT1G65330 (E=4e-028) PHE1, AGL37 | PHE1 (PHERES1); DNA binding / transcription factor

Coordinates

chrA02:+:24783071..24784258

Molecular Weight (calculated)

44765.3 Da

IEP (calculated)

5.567

GRAVY (calculated)

-0.774

Length

395 amino acids

Sequence
(BLAST)

001: MSTRGRLKLN FIDNKSARNQ TFKKRTRGFM KKAKELSTLC GIKVSAVIKS CDNAEPEFWP SREGAEAVHS EFMKVVETQG FSKMHNHESY LLERIQRDGE
101: KARRLHAEAE NREIELREVM FDLLKGKTLM PHQYGDPSFM RELNLFIGGY ANRVTYRTQF LEGSVEPVPP NFAGANAHGP VVDDVNPVVV GTEGSVINPT
201: EAYDHMPQYD GMDMSVNVEV PEPFQYQTNA NYYDQTQPWF NGSSQGMNVN HQEPFQYQTP PNSYDHIQPM FNGSSQGMNM KYEEPFQYQP HGNLYDQMQP
301: MFYGSSQDMY TGLSHDQGQS SNTTQQFMSL LMGRPQQMSD VQDLASVASM DDNNNRYQQL PVTSQMPSTT TTTTAAANLS GHSINNGWPT KFGLD

Best Arabidopsis Sequence Match ( AT1G65330.1 )
(BLAST)

001: MRGKMKLSFI ENDSVRKTTF TKRKKGMLKK FNELVTLCGV DACAVIRSPY NSIQEPWPSR EGVEEVMSKF MEFSVLDRTK KMVDQETFLR QRIAKETERL
101: QKLRDENRNS QIRDLMFGCL KGEVDVSHLH GRDLLDLNVF LNKYLNGVIR RVEILKENGE SSSSVPPPIG VAPTVVDASV PIGFDGRMIQ DQNQNQQEPV
201: QFQYQALYDF YDQIPKKLHD FNMKMNIDPN QSMNLDLNDG EDEGIPCMDN NNYHPEIDCL ATVTTAPTDV CAPNIINDL

Arabidopsis Description

PHE1MADS-box transcription factor PHERES 1 [Source:UniProtKB/Swiss-Prot;Acc:O80805]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.