Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G27960.1 | Thale cress | nucleus | 73.62 | 79.38 |
| AT5G26650.1 | Thale cress | nucleus | 83.19 | 78.42 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 6.09 | 51.22 |
| AT1G65300.1 | Thale cress | nucleus | 31.88 | 39.57 |
| AT1G59930.1 | Thale cress | cytosol | 15.07 | 39.39 |
| AT5G35120.1 | Thale cress | cytosol | 12.17 | 39.25 |
| AT1G31630.1 | Thale cress | mitochondrion | 37.1 | 37.76 |
| CDX88231 | Canola | nucleus | 29.28 | 36.59 |
| AT1G65330.1 | Thale cress | nucleus | 28.7 | 35.48 |
| CDX80577 | Canola | mitochondrion, nucleus | 30.72 | 35.22 |
| AT5G26630.1 | Thale cress | nucleus | 21.45 | 33.95 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 35.36 | 33.52 |
| CDY71896 | Canola | nucleus | 15.94 | 31.98 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 10.43 | 30.25 |
| Bra020552.1-P | Field mustard | nucleus | 29.57 | 29.91 |
| Bra020550.1-P | Field mustard | nucleus | 32.75 | 29.74 |
| CDY71564 | Canola | nucleus | 28.99 | 29.5 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 13.33 | 29.49 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 7.25 | 29.41 |
| CDY05333 | Canola | nucleus | 31.88 | 29.18 |
| CDY67043 | Canola | nucleus | 33.04 | 29.16 |
| AT1G31640.1 | Thale cress | mitochondrion | 38.84 | 28.88 |
| CDY05515 | Canola | nucleus | 31.01 | 28.38 |
| Bra020524.1-P | Field mustard | nucleus | 29.57 | 28.33 |
| CDY05514 | Canola | nucleus | 29.57 | 28.33 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 17.68 | 27.6 |
| Bra020525.1-P | Field mustard | nucleus | 31.01 | 27.09 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 17.68 | 26.52 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 17.68 | 26.29 |
| CDY70782 | Canola | nucleus | 24.06 | 25.7 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 13.91 | 25.26 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 14.2 | 25.13 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 16.52 | 25.11 |
| AT3G05860.1 | Thale cress | nucleus | 18.84 | 25.0 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 14.2 | 24.62 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 11.59 | 24.54 |
| AT5G48670.1 | Thale cress | nucleus | 22.61 | 24.3 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 16.23 | 24.14 |
| OQU83806 | Sorghum | nucleus | 12.17 | 24.0 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 12.75 | 23.91 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 15.65 | 23.79 |
| KXG28892 | Sorghum | nucleus | 12.75 | 23.78 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 16.81 | 23.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 15.94 | 23.61 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 15.36 | 23.35 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 12.46 | 23.24 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 14.2 | 23.22 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 16.23 | 22.86 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 16.23 | 22.86 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 16.52 | 22.71 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 12.17 | 22.7 |
| KXG28893 | Sorghum | nucleus | 11.01 | 22.62 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 10.72 | 22.56 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 12.46 | 22.51 |
| Os03t0582400-01 | Rice | nucleus | 16.23 | 22.49 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 12.17 | 22.34 |
| EES10067 | Sorghum | mitochondrion | 13.33 | 22.33 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 13.62 | 22.27 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 16.81 | 22.22 |
| TraesCS7D01G548500.1 | Wheat | plastid | 15.07 | 22.13 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 16.52 | 21.84 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 16.52 | 21.84 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 14.49 | 21.83 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 14.78 | 21.79 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 14.78 | 21.79 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 11.59 | 21.62 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 17.39 | 21.58 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 16.23 | 21.54 |
| PGSC0003DMT400003073 | Potato | cytosol | 6.67 | 21.3 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 13.91 | 21.15 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 15.36 | 21.12 |
| KXG32310 | Sorghum | nucleus | 14.78 | 21.07 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 11.59 | 20.94 |
| EES06917 | Sorghum | mitochondrion, nucleus | 15.65 | 20.85 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 14.49 | 20.75 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 14.49 | 20.75 |
| KXG28889 | Sorghum | nucleus | 14.78 | 20.4 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 13.91 | 20.34 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 13.91 | 20.34 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 14.2 | 20.33 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 11.88 | 20.0 |
| AT2G28700.1 | Thale cress | nucleus | 18.84 | 19.76 |
| Zm00001d016791_P001 | Maize | mitochondrion | 16.23 | 19.51 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 13.62 | 19.5 |
| Zm00001d048894_P001 | Maize | mitochondrion | 13.91 | 19.43 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 13.33 | 19.09 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 13.62 | 18.95 |
| KXG28890 | Sorghum | mitochondrion | 13.91 | 18.82 |
| OQU83804 | Sorghum | mitochondrion | 12.75 | 18.72 |
| KXG28888 | Sorghum | nucleus | 13.62 | 18.43 |
| KXG38099 | Sorghum | plastid | 16.81 | 18.41 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 11.88 | 18.06 |
| EER91288 | Sorghum | mitochondrion, nucleus | 15.65 | 17.2 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 10.43 | 16.98 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 15.07 | 16.1 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 14.78 | 15.79 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 13.62 | 15.02 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 13.33 | 14.7 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 13.62 | 14.6 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 13.04 | 14.56 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 12.46 | 13.87 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 12.17 | 13.68 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 13.33 | 12.92 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 13.33 | 12.67 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 11.88 | 12.35 |
| PGSC0003DMT400089615 | Potato | cytosol | 5.8 | 8.4 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:832732 | ProteinID:AED93593.1 | Symbol:AGL34 | ArrayExpress:AT5G26580 |
| EnsemblPlantsGene:AT5G26580 | RefSeq:AT5G26580 | TAIR:AT5G26580 | RefSeq:AT5G26580-TAIR-G | EnsemblPlants:AT5G26580.1 | TAIR:AT5G26580.1 |
| EMBL:AY141248 | Unigene:At.64249 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like | RefSeq:NP_850888.2 |
| PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | UniProt:Q7X9H2 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | TMHMM:TMhelix | UniParc:UPI00001B24EE |
Description
AGL34AGAMOUS-like-34 [Source:UniProtKB/TrEMBL;Acc:Q7X9H2]
Coordinates
chr5:-:9393065..9394102
Molecular Weight (calculated)
39584.2 Da
IEP (calculated)
6.097
GRAVY (calculated)
-0.530
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMKKVKLSL IANEISRETS FMKRKNGIMK KLYELSTLCG VQACTLIYSP FIPVPEFLEM SPTARTRKMM NQETYLMERI TKAKEQLQNL VGANQELQVR
101: RFMFDCVEGK MSQYRYDAKD LQDLLSCINL YLDQLNGRIE ILKEHGDSLP SVSPFPTRIG VEETGDESSS DSPILATTGV VDTPNATNPR VLVADTTHFL
201: DANATAVTAP FGFSNHIQYK NMNMSQDLHR PFQHLVPTNF CDFFQNQNMN QVQYQAPPND MFNQIQREFY NINLNQKSNQ YMNQQQPFMN PMVEQHMSHV
301: GGRESIPFMD GNYYNYNQLP VVDHGSTSYM PSTTGVYDPY FNNNL
101: RFMFDCVEGK MSQYRYDAKD LQDLLSCINL YLDQLNGRIE ILKEHGDSLP SVSPFPTRIG VEETGDESSS DSPILATTGV VDTPNATNPR VLVADTTHFL
201: DANATAVTAP FGFSNHIQYK NMNMSQDLHR PFQHLVPTNF CDFFQNQNMN QVQYQAPPND MFNQIQREFY NINLNQKSNQ YMNQQQPFMN PMVEQHMSHV
301: GGRESIPFMD GNYYNYNQLP VVDHGSTSYM PSTTGVYDPY FNNNL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.