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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 3
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G31630.1 EER90862 AT1G69120.1 15805477
AT1G31630.1 EER95753 AT1G69120.1 15805477
AT1G31630.1 EER97510 AT1G69120.1 15805477
AT1G31630.1 KXG23502 AT1G69120.1 15805477
AT1G31630.1 EER89250 AT2G03710.1 15805477
AT1G31630.1 OQU93000 AT2G03710.1 15805477
AT1G31630.1 EES07448 AT2G45650.1 15805477
AT1G31630.1 KXG26975 AT2G45650.1 15805477
AT1G31630.1 EER91288 AT5G27960.1 15805477
AT1G31630.1 EES06917 AT5G27960.1 15805477
AT1G31630.1 EES10067 AT5G27960.1 15805477
AT1G31630.1 KXG28888 AT5G27960.1 15805477
AT1G31630.1 KXG28889 AT5G27960.1 15805477
AT1G31630.1 KXG28890 AT5G27960.1 15805477
AT1G31630.1 KXG28892 AT5G27960.1 15805477
AT1G31630.1 KXG28893 AT5G27960.1 15805477
AT1G31630.1 KXG32310 AT5G27960.1 15805477
AT1G31630.1 KXG38099 AT5G27960.1 15805477
AT1G31630.1 OQU83804 AT5G27960.1 15805477
AT1G31630.1 OQU83806 AT5G27960.1 15805477
AT1G31640.1 EER90862 AT1G69120.1 15805477
AT1G31640.1 EER95753 AT1G69120.1 15805477
AT1G31640.1 EER97510 AT1G69120.1 15805477
AT1G31640.1 KXG23502 AT1G69120.1 15805477
AT1G31640.1 EER89250 AT2G03710.1 15805477
AT1G31640.1 OQU93000 AT2G03710.1 15805477
AT1G31640.1 EES07448 AT2G45650.1 15805477
AT1G31640.1 KXG26975 AT2G45650.1 15805477
AT1G31640.1 EER91288 AT5G27960.1 15805477
AT1G31640.1 EES06917 AT5G27960.1 15805477
AT1G31640.1 EES10067 AT5G27960.1 15805477
AT1G31640.1 KXG28888 AT5G27960.1 15805477
AT1G31640.1 KXG28889 AT5G27960.1 15805477
AT1G31640.1 KXG28890 AT5G27960.1 15805477
AT1G31640.1 KXG28892 AT5G27960.1 15805477
AT1G31640.1 KXG28893 AT5G27960.1 15805477
AT1G31640.1 KXG32310 AT5G27960.1 15805477
AT1G31640.1 KXG38099 AT5G27960.1 15805477
AT1G31640.1 OQU83804 AT5G27960.1 15805477
AT1G31640.1 OQU83806 AT5G27960.1 15805477
AT5G27960.1 EER91288 AT1G31630.1 15805477
AT5G27960.1 EES06917 AT1G31630.1 15805477
AT5G27960.1 EES10067 AT1G31630.1 15805477
AT5G27960.1 KXG28888 AT1G31630.1 15805477
AT5G27960.1 KXG28889 AT1G31630.1 15805477
AT5G27960.1 KXG28890 AT1G31630.1 15805477
AT5G27960.1 KXG28892 AT1G31630.1 15805477
AT5G27960.1 KXG28893 AT1G31630.1 15805477
AT5G27960.1 KXG32310 AT1G31630.1 15805477
AT5G27960.1 KXG38099 AT1G31630.1 15805477
AT5G27960.1 OQU83804 AT1G31630.1 15805477
AT5G27960.1 OQU83806 AT1G31630.1 15805477
AT5G27960.1 EER91288 AT1G31640.1 15805477
AT5G27960.1 EES06917 AT1G31640.1 15805477
AT5G27960.1 EES10067 AT1G31640.1 15805477
AT5G27960.1 KXG28888 AT1G31640.1 15805477
AT5G27960.1 KXG28889 AT1G31640.1 15805477
AT5G27960.1 KXG28890 AT1G31640.1 15805477
AT5G27960.1 KXG28892 AT1G31640.1 15805477
AT5G27960.1 KXG28893 AT1G31640.1 15805477
AT5G27960.1 KXG32310 AT1G31640.1 15805477
AT5G27960.1 KXG38099 AT1G31640.1 15805477
AT5G27960.1 OQU83804 AT1G31640.1 15805477
AT5G27960.1 OQU83806 AT1G31640.1 15805477
AT5G27960.1 KXG19627 AT1G77980.1 15805477
AT5G48670.1 EES01631 AT2G41090.1 17360592
AT5G48670.1 EES09201 AT2G41090.1 17360592
AT5G48670.1 EES16322 AT2G41090.1 17360592
AT5G48670.1 OQU78227 AT2G41090.1 17360592
AT5G48670.1 EES01631 AT2G41100.1 17360592
AT5G48670.1 EES09201 AT2G41100.1 17360592
AT5G48670.1 EES16322 AT2G41100.1 17360592
AT5G48670.1 OQU78227 AT2G41100.1 17360592
AT5G48670.1 KXG37587 AT4G14640.1 17360592
AT5G48670.1 KXG37588 AT4G14640.1 17360592
AT5G48670.1 EES01631 AT5G21274.1 17360592
AT5G48670.1 EES09201 AT5G21274.1 17360592
AT5G48670.1 EES16322 AT5G21274.1 17360592
AT5G48670.1 OQU78227 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG28893 Sorghum nucleus 89.19 98.21
OQU83806 Sorghum nucleus 89.19 94.29
EES10067 Sorghum mitochondrion 77.84 69.9
KXG28889 Sorghum nucleus 83.24 61.6
Zm00001d048894_P001 Maize mitochondrion 78.92 59.11
GSMUA_Achr2P18410_001 Banana nucleus 12.43 56.1
KXG28888 Sorghum nucleus 66.49 48.24
KXG28890 Sorghum mitochondrion 65.95 47.84
OQU83804 Sorghum mitochondrion 60.0 47.23
KXG32310 Sorghum nucleus 44.86 34.3
KRH33740 Soybean nucleus 28.11 32.7
KRG98150 Soybean mitochondrion, nucleus 29.19 32.34
KRG88863 Soybean mitochondrion, nucleus 24.32 32.14
KRH30476 Soybean nucleus 25.95 32.0
GSMUA_Achr3P08500_001 Banana nucleus 38.92 31.3
Bra005166.1-P Field mustard mitochondrion, nucleus 21.08 31.2
GSMUA_Achr2P18400_001 Banana nucleus 38.38 30.6
KRH30113 Soybean nucleus 27.57 29.82
GSMUA_AchrUn_... Banana nucleus 37.3 29.61
KRG89836 Soybean nucleus 23.78 29.53
KRH72060 Soybean nucleus 27.03 29.24
EES06917 Sorghum mitochondrion, nucleus 40.54 28.96
CDY64992 Canola mitochondrion, nucleus 23.24 27.92
CDY71896 Canola nucleus 25.95 27.91
GSMUA_Achr3P24560_001 Banana nucleus 34.59 27.59
VIT_14s0060g00300.t01 Wine grape nucleus 34.59 27.12
KRG98149 Soybean nucleus 30.81 26.76
CDY21372 Canola mitochondrion 23.24 26.54
CDY33537 Canola nucleus 28.11 26.53
PGSC0003DMT400086956 Potato nucleus 21.08 26.53
KXG38099 Sorghum plastid 44.86 26.35
KRH66114 Soybean nucleus 28.11 26.26
AT5G26630.1 Thale cress nucleus 30.81 26.15
Bra024521.1-P Field mustard mitochondrion 22.7 25.93
CDY04801 Canola mitochondrion, nucleus 22.7 25.93
KRG98152 Soybean nucleus 26.49 25.79
PGSC0003DMT400089787 Potato cytosol 23.78 25.29
AT5G27810.1 Thale cress cytosol, nucleus, plastid 16.22 25.21
KRH30919 Soybean nucleus 32.97 25.21
KRG97962 Soybean nucleus 32.43 25.1
GSMUA_Achr8P06150_001 Banana nucleus 32.97 24.9
KRH30473 Soybean mitochondrion, nucleus 29.73 24.89
KRG98142 Soybean nucleus 35.68 24.72
Bra012335.1-P Field mustard mitochondrion 21.62 24.69
CDY25744 Canola mitochondrion 21.62 24.69
AT1G22590.2 Thale cress mitochondrion, nucleus 21.62 24.54
Solyc01g102260.2.1 Tomato nucleus 32.97 24.5
KRG98148 Soybean nucleus 30.27 24.45
KRH66052 Soybean mitochondrion, nucleus 29.73 24.44
CDX80580 Canola nucleus 26.49 24.26
Bra009913.1-P Field mustard nucleus 26.49 24.14
CDX88234 Canola nucleus 23.78 24.04
Bra020555.1-P Field mustard nucleus 27.57 23.61
CDY05540 Canola nucleus 27.57 23.61
CDY25000 Canola nucleus 27.57 23.61
KRH30119 Soybean cytosol 20.54 23.6
EER91288 Sorghum mitochondrion, nucleus 40.0 23.57
KRG98143 Soybean nucleus 26.49 23.22
PGSC0003DMT400003073 Potato cytosol 12.97 22.22
KRH30472 Soybean nucleus 25.41 22.17
KRG98147 Soybean mitochondrion, nucleus 28.65 20.62
KRG88915 Soybean mitochondrion, nucleus 22.16 19.81
AT1G65300.1 Thale cress nucleus 29.73 19.78
KRH72066 Soybean mitochondrion, nucleus 21.62 19.42
Bra029469.1-P Field mustard nucleus 31.35 19.08
CDY60402 Canola nucleus 31.35 19.08
CDY27735 Canola nucleus 27.03 18.73
AT1G65330.1 Thale cress nucleus 28.11 18.64
Bra018490.1-P Field mustard nucleus 29.19 18.62
CDX97329 Canola nucleus 29.19 18.62
AT3G05860.1 Thale cress nucleus 25.41 18.08
AT5G35120.1 Thale cress cytosol 10.27 17.76
PGSC0003DMT400073719 Potato nucleus 24.32 17.24
CDX88231 Canola nucleus 25.41 17.03
CDX80577 Canola mitochondrion, nucleus 27.57 16.94
CDY38696 Canola nucleus 25.41 16.91
PGSC0003DMT400088489 Potato nucleus 19.46 16.9
Bra039404.1-P Field mustard nucleus 27.57 16.89
AT5G48670.1 Thale cress nucleus 29.19 16.82
PGSC0003DMT400089454 Potato nucleus 22.16 16.73
Bra035448.1-P Field mustard nucleus 23.78 16.67
Bra035449.1-P Field mustard nucleus 23.78 16.67
PGSC0003DMT400091650 Potato nucleus 23.24 16.6
PGSC0003DMT400090586 Potato nucleus 21.08 16.6
KRH30471 Soybean nucleus 26.49 16.17
CDY18830 Canola nucleus 29.19 15.7
AT5G27960.1 Thale cress nucleus 27.03 15.62
CDY05207 Canola nucleus 28.11 15.57
AT2G28700.1 Thale cress nucleus 27.57 15.5
Bra041022.1-P Field mustard nucleus 27.57 15.27
KRG98146 Soybean nucleus 27.03 15.24
AT1G59930.1 Thale cress cytosol 10.81 15.15
KRG88914 Soybean cytosol 17.84 15.07
KRG88862 Soybean nucleus 25.41 15.02
CDY27734 Canola nucleus 27.03 14.88
Bra009911.1-P Field mustard mitochondrion, nucleus 29.19 14.84
AT1G31630.1 Thale cress mitochondrion 27.03 14.75
CDY71564 Canola nucleus 27.03 14.75
PGSC0003DMT400088654 Potato nucleus 25.95 14.68
PGSC0003DMT400090953 Potato nucleus 26.49 14.58
Bra020552.1-P Field mustard nucleus 25.95 14.08
CDY70782 Canola nucleus 24.32 13.93
AT5G26650.1 Thale cress nucleus 27.03 13.66
CDY05515 Canola nucleus 27.57 13.53
PGSC0003DMT400095062 Potato nucleus 20.54 13.48
CDY05333 Canola nucleus 27.03 13.26
Bra020550.1-P Field mustard nucleus 27.03 13.16
PGSC0003DMT400095755 Potato nucleus 24.32 13.08
Bra040248.1-P Field mustard nucleus 29.19 13.08
Bra020525.1-P Field mustard nucleus 27.57 12.91
AT5G26580.1 Thale cress nucleus 23.78 12.75
PGSC0003DMT400061726 Potato nucleus 22.16 12.54
PGSC0003DMT400088008 Potato nucleus 12.97 12.44
Bra020524.1-P Field mustard nucleus 23.78 12.22
CDY05514 Canola nucleus 23.78 12.22
CDY67043 Canola nucleus 25.41 12.02
PGSC0003DMT400061724 Potato mitochondrion, nucleus 24.32 11.75
PGSC0003DMT400077258 Potato nucleus 24.32 11.54
AT1G31640.1 Thale cress mitochondrion 28.11 11.21
PGSC0003DMT400085256 Potato nucleus 22.7 11.11
PGSC0003DMT400095426 Potato mitochondrion 20.54 10.89
PGSC0003DMT400087890 Potato cytosol 6.49 10.71
PGSC0003DMT400090516 Potato nucleus 9.73 10.17
PGSC0003DMT400095417 Potato cytosol 7.03 10.16
PGSC0003DMT400085623 Potato nucleus 9.73 9.0
PGSC0003DMT400086447 Potato cytosol 8.11 7.81
PGSC0003DMT400086919 Potato nucleus 9.73 7.32
PGSC0003DMT400085114 Potato cytosol, endoplasmic reticulum, nucleus 8.65 5.67
Solyc07g043080.1.1 Tomato cytosol 3.78 5.65
CDY05205 Canola cytosol, mitochondrion, nucleus 4.86 5.52
PGSC0003DMT400094378 Potato nucleus 3.78 4.49
PGSC0003DMT400094113 Potato cytosol 3.24 3.47
PGSC0003DMT400085093 Potato extracellular, plastid, vacuole 3.24 2.99
PGSC0003DMT400061722 Potato plastid 1.62 2.88
PGSC0003DMT400097522 Potato cytosol, extracellular, mitochondrion, nucleus 1.62 2.56
PGSC0003DMT400065010 Potato vacuole 2.7 2.5
PGSC0003DMT400089615 Potato cytosol 2.7 2.1
PGSC0003DMT400091747 Potato plastid 1.62 1.97
Protein Annotations
MapMan:15.5.14Gene3D:3.40.1810.10UniProt:A0A1B6PT92GO:GO:0000982GO:GO:0000987GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0045944GO:GO:0046983
InterPro:IPR002100InterPro:IPR036879EnsemblPlants:KXG28892ProteinID:KXG28892ProteinID:KXG28892.1InterPro:MADS_SRF-like
PFAM:PF00319PFscan:PS50066PANTHER:PTHR11945PANTHER:PTHR11945:SF153SMART:SM00432EnsemblPlantsGene:SORBI_3005G180200
SUPFAM:SSF55455InterPro:TF_MADSboxInterPro:TF_MADSbox_sfUniParc:UPI00081ABF2D::
Description
hypothetical protein
Coordinates
chr5:-:66300522..66301079
Molecular Weight (calculated)
20936.5 Da
IEP (calculated)
9.262
GRAVY (calculated)
-0.565
Length
185 amino acids
Sequence
(BLAST)
001: MAHKKVNLQW ISNDATRRAT YKRCSKSLEK KASELTTLCG IKLCVVVYGQ GEAQPKVWPS NEEAKDLLMK FNRRLDVSCL KKTKNQEEFL QSRSLKLHEQ
101: VSKLDLENRE HETLDLLHDS MVGGRPGLVG SNKGELLSLR DMVDMKMRKI EARLQQLAVG EEVLPQPLPQ DSYNLGACSM LPSAK
Best Arabidopsis Sequence Match ( AT5G48670.1 )
(BLAST)
001: MTRKKVKLAY ISNDSSRKAT FKKRKKGLMK KVHELSTLCG ITACAIIYSP YDTNPEVWPS NSGVQRVVSE FRTLPEMDQH KKMVDQEGFL KQRIAKATET
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H
Arabidopsis Description
AGL80Agamous-like MADS-box protein AGL80 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.