Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P18410_001 | Banana | nucleus | 15.31 | 73.17 |
| CDX97329 | Canola | nucleus | 89.29 | 60.34 |
| CDY60402 | Canola | nucleus | 82.65 | 53.29 |
| KRG89836 | Soybean | nucleus | 38.78 | 51.01 |
| KRG88863 | Soybean | mitochondrion, nucleus | 36.22 | 50.71 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 58.16 | 48.31 |
| KRG97962 | Soybean | nucleus | 57.14 | 46.86 |
| KRH30919 | Soybean | nucleus | 57.14 | 46.28 |
| Solyc01g102260.2.1 | Tomato | nucleus | 57.65 | 45.38 |
| KRG98152 | Soybean | nucleus | 42.35 | 43.68 |
| KRH72060 | Soybean | nucleus | 37.24 | 42.69 |
| KRH30119 | Soybean | cytosol | 34.69 | 42.24 |
| CDY64992 | Canola | mitochondrion, nucleus | 33.16 | 42.21 |
| KRH30113 | Soybean | nucleus | 36.73 | 42.11 |
| KRG98150 | Soybean | mitochondrion, nucleus | 35.2 | 41.32 |
| KRH30473 | Soybean | mitochondrion, nucleus | 44.39 | 39.37 |
| CDY05540 | Canola | nucleus | 42.86 | 38.89 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 16.84 | 38.82 |
| KRG98149 | Soybean | nucleus | 41.84 | 38.5 |
| CDY25000 | Canola | nucleus | 42.35 | 38.43 |
| CDX88234 | Canola | nucleus | 35.2 | 37.7 |
| KRH66114 | Soybean | nucleus | 37.76 | 37.37 |
| KRH30476 | Soybean | nucleus | 28.57 | 37.33 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 29.59 | 37.18 |
| CDX80580 | Canola | nucleus | 38.27 | 37.13 |
| KRH30472 | Soybean | nucleus | 39.8 | 36.79 |
| KRG98148 | Soybean | nucleus | 42.35 | 36.24 |
| KRG98142 | Soybean | nucleus | 46.94 | 34.46 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 38.78 | 34.39 |
| CDY71896 | Canola | nucleus | 30.1 | 34.3 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 39.8 | 33.62 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 38.78 | 33.04 |
| CDY21372 | Canola | mitochondrion | 27.04 | 32.72 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 31.63 | 32.63 |
| KRH66052 | Soybean | mitochondrion, nucleus | 37.24 | 32.44 |
| KRG98143 | Soybean | nucleus | 34.69 | 32.23 |
| CDY04801 | Canola | mitochondrion, nucleus | 26.53 | 32.1 |
| CDY25744 | Canola | mitochondrion | 26.53 | 32.1 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 31.63 | 31.79 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 26.53 | 31.71 |
| KRG88915 | Soybean | mitochondrion, nucleus | 32.65 | 30.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.73 | 30.9 |
| CDY05207 | Canola | nucleus | 52.55 | 30.84 |
| KRG98147 | Soybean | mitochondrion, nucleus | 40.31 | 30.74 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 31.12 | 30.65 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 28.57 | 30.43 |
| CDY27734 | Canola | nucleus | 52.04 | 30.36 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 34.69 | 29.31 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 28.06 | 29.26 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 27.55 | 29.19 |
| KRH72066 | Soybean | mitochondrion, nucleus | 30.1 | 28.64 |
| KXG28892 | Sorghum | nucleus | 26.53 | 28.11 |
| CDY27735 | Canola | nucleus | 38.27 | 28.09 |
| OQU83806 | Sorghum | nucleus | 25.0 | 28.0 |
| TraesCS7D01G548500.1 | Wheat | plastid | 32.65 | 27.23 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 26.53 | 27.23 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 25.51 | 27.03 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 32.14 | 26.92 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 28.57 | 26.54 |
| Os03t0582400-01 | Rice | nucleus | 33.67 | 26.51 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 31.63 | 26.5 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 25.0 | 26.49 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 32.65 | 26.12 |
| EES06917 | Sorghum | mitochondrion, nucleus | 34.18 | 25.87 |
| KXG28893 | Sorghum | nucleus | 21.94 | 25.6 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 27.55 | 25.59 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 29.59 | 25.55 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 29.59 | 25.55 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 32.65 | 25.5 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 24.49 | 25.13 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 32.14 | 25.1 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 35.2 | 24.82 |
| CDY38696 | Canola | nucleus | 34.69 | 24.46 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 25.51 | 24.39 |
| EES10067 | Sorghum | mitochondrion | 25.51 | 24.27 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 30.1 | 24.08 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 30.1 | 24.08 |
| Zm00001d016791_P001 | Maize | mitochondrion | 35.2 | 24.04 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 28.06 | 24.02 |
| KRG98146 | Soybean | nucleus | 39.8 | 23.78 |
| KRH30471 | Soybean | nucleus | 36.73 | 23.76 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 29.08 | 23.65 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 29.08 | 23.65 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 25.51 | 23.58 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 27.04 | 23.35 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 29.08 | 22.98 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 27.55 | 22.88 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 30.1 | 22.69 |
| KRG88862 | Soybean | nucleus | 36.22 | 22.68 |
| KRG88914 | Soybean | cytosol | 25.0 | 22.37 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 29.59 | 22.22 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 29.59 | 22.22 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 29.59 | 22.22 |
| OQU83804 | Sorghum | mitochondrion | 26.53 | 22.13 |
| CDY18830 | Canola | nucleus | 38.78 | 22.09 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 25.51 | 22.03 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 25.0 | 21.59 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 25.51 | 21.19 |
| KXG38099 | Sorghum | plastid | 33.67 | 20.95 |
| KXG28888 | Sorghum | nucleus | 27.04 | 20.78 |
| KXG28890 | Sorghum | mitochondrion | 27.04 | 20.78 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 25.51 | 20.75 |
| CDX88231 | Canola | nucleus | 29.08 | 20.65 |
| CDX80577 | Canola | mitochondrion, nucleus | 31.63 | 20.6 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 25.0 | 20.33 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 25.0 | 20.33 |
| KXG32310 | Sorghum | nucleus | 25.0 | 20.25 |
| Zm00001d048894_P001 | Maize | mitochondrion | 25.51 | 20.24 |
| KXG28889 | Sorghum | nucleus | 25.51 | 20.0 |
| EER91288 | Sorghum | mitochondrion, nucleus | 30.61 | 19.11 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 27.04 | 16.93 |
| CDY71564 | Canola | nucleus | 29.08 | 16.81 |
| CDY70782 | Canola | nucleus | 27.55 | 16.72 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 26.53 | 16.61 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 25.51 | 16.18 |
| CDY05515 | Canola | nucleus | 30.1 | 15.65 |
| CDY05333 | Canola | nucleus | 29.59 | 15.38 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 25.0 | 15.17 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 23.98 | 15.16 |
| CDY67043 | Canola | nucleus | 30.1 | 15.09 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 23.47 | 14.98 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 23.47 | 14.29 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 23.47 | 14.24 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 22.96 | 13.55 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 24.49 | 13.48 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 24.49 | 13.22 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 10.2 | 12.27 |
| CDY05514 | Canola | nucleus | 21.94 | 11.94 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078H7X3 | UniProt:A0A078H7X3 | EnsemblPlants:CDY33537 | ProteinID:CDY33537 |
| ProteinID:CDY33537.1 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00054797001 |
| InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI0004EEB712 | : | : | : | : | : |
Description
BnaC02g26190DBnaC02g26190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7X3]
Coordinates
chrLK032316:-:105233..106744
Molecular Weight (calculated)
22311.2 Da
IEP (calculated)
9.465
GRAVY (calculated)
-0.389
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRKKVKLAF IANDSSSKAT YKKRKKGLMK KVNELSTLCG INACAIIYSP YDSNPEVWPS NSGVQRIISE FRTLPEMDQN KKMVDQETFL RQRIAKASDN
101: LKKQRKDNLE MEMTEVMFQC LIGNMGMFNL NIMDLNDLGY LIDQCLKDVN RRIEILGNSR MELGESSNNV AAEAIQTLPI IHGSARVSRV DVHITF
101: LKKQRKDNLE MEMTEVMFQC LIGNMGMFNL NIMDLNDLGY LIDQCLKDVN RRIEILGNSR MELGESSNNV AAEAIQTLPI IHGSARVSRV DVHITF
001: MTRKKVKLAY ISNDSSRKAT FKKRKKGLMK KVHELSTLCG ITACAIIYSP YDTNPEVWPS NSGVQRVVSE FRTLPEMDQH KKMVDQEGFL KQRIAKATET
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H
Arabidopsis Description
AGL80Agamous-like MADS-box protein AGL80 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.