Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024521.1-P | Field mustard | mitochondrion | 98.15 | 98.15 |
| CDY21372 | Canola | mitochondrion | 97.53 | 97.53 |
| CDY25744 | Canola | mitochondrion | 80.25 | 80.25 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 74.69 | 74.23 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 11.73 | 46.34 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 17.28 | 32.94 |
| PGSC0003DMT400086956 | Potato | nucleus | 27.78 | 30.61 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 28.4 | 28.05 |
| CDY33537 | Canola | nucleus | 32.1 | 26.53 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 36.42 | 25.65 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 24.69 | 25.64 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 29.01 | 25.41 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 34.57 | 25.34 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 29.63 | 25.26 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 29.63 | 25.13 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 30.25 | 25.13 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 28.4 | 24.86 |
| PGSC0003DMT400089787 | Potato | cytosol | 26.54 | 24.71 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 30.25 | 24.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.19 | 24.46 |
| EES10067 | Sorghum | mitochondrion | 30.86 | 24.27 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 27.16 | 23.91 |
| CDY71896 | Canola | nucleus | 25.31 | 23.84 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 33.95 | 23.71 |
| CDY64992 | Canola | mitochondrion, nucleus | 22.22 | 23.38 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 26.54 | 22.87 |
| OQU83806 | Sorghum | nucleus | 24.69 | 22.86 |
| KXG28892 | Sorghum | nucleus | 25.93 | 22.7 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 25.31 | 22.16 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 25.93 | 21.99 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 33.95 | 21.91 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 28.4 | 21.8 |
| CDX80580 | Canola | nucleus | 27.16 | 21.78 |
| CDY05540 | Canola | nucleus | 29.01 | 21.76 |
| CDY25000 | Canola | nucleus | 29.01 | 21.76 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 36.42 | 21.22 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 30.25 | 21.12 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 32.72 | 21.12 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 29.01 | 20.52 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 32.72 | 20.38 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 29.63 | 20.34 |
| CDX88234 | Canola | nucleus | 22.84 | 20.22 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 30.25 | 20.0 |
| OQU83804 | Sorghum | mitochondrion | 28.4 | 19.57 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 31.48 | 19.54 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 31.48 | 19.54 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 31.48 | 19.54 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 29.01 | 19.5 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 25.31 | 19.43 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 25.31 | 19.34 |
| KXG28889 | Sorghum | nucleus | 29.63 | 19.2 |
| PGSC0003DMT400089454 | Potato | nucleus | 29.01 | 19.18 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 28.4 | 19.09 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 28.4 | 19.09 |
| Zm00001d016791_P001 | Maize | mitochondrion | 33.33 | 18.82 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 27.16 | 18.8 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 28.4 | 18.78 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 28.4 | 18.78 |
| PGSC0003DMT400090586 | Potato | nucleus | 27.16 | 18.72 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 27.78 | 18.67 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 27.16 | 18.64 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 23.46 | 18.54 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 25.93 | 18.5 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 25.93 | 18.5 |
| KXG28893 | Sorghum | nucleus | 19.14 | 18.45 |
| CDY60402 | Canola | nucleus | 34.57 | 18.42 |
| KXG38099 | Sorghum | plastid | 35.8 | 18.41 |
| CDX97329 | Canola | nucleus | 32.72 | 18.28 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 27.16 | 18.26 |
| Zm00001d048894_P001 | Maize | mitochondrion | 27.78 | 18.22 |
| EES06917 | Sorghum | mitochondrion, nucleus | 29.01 | 18.15 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 27.78 | 18.15 |
| Os03t0582400-01 | Rice | nucleus | 27.78 | 18.07 |
| KXG28888 | Sorghum | nucleus | 28.4 | 18.04 |
| KXG28890 | Sorghum | mitochondrion | 28.4 | 18.04 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 25.93 | 17.95 |
| TraesCS7D01G548500.1 | Wheat | plastid | 25.93 | 17.87 |
| KXG32310 | Sorghum | nucleus | 26.54 | 17.77 |
| EER91288 | Sorghum | mitochondrion, nucleus | 32.1 | 16.56 |
| PGSC0003DMT400088489 | Potato | nucleus | 21.6 | 16.43 |
| CDY27734 | Canola | nucleus | 33.95 | 16.37 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 22.84 | 16.3 |
| CDY05207 | Canola | nucleus | 32.72 | 15.87 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 22.22 | 15.86 |
| PGSC0003DMT400091650 | Potato | nucleus | 25.31 | 15.83 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 21.6 | 15.42 |
| PGSC0003DMT400073719 | Potato | nucleus | 24.69 | 15.33 |
| CDX80577 | Canola | mitochondrion, nucleus | 28.4 | 15.28 |
| CDX88231 | Canola | nucleus | 25.93 | 15.22 |
| PGSC0003DMT400087890 | Potato | cytosol | 10.49 | 15.18 |
| PGSC0003DMT400061726 | Potato | nucleus | 30.25 | 14.98 |
| PGSC0003DMT400095062 | Potato | nucleus | 25.93 | 14.89 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 28.4 | 14.7 |
| CDY27735 | Canola | nucleus | 24.07 | 14.61 |
| CDY38696 | Canola | nucleus | 24.69 | 14.39 |
| PGSC0003DMT400095417 | Potato | cytosol | 11.11 | 14.06 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 27.16 | 14.06 |
| PGSC0003DMT400088008 | Potato | nucleus | 16.05 | 13.47 |
| CDY18830 | Canola | nucleus | 28.4 | 13.37 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 26.54 | 13.31 |
| PGSC0003DMT400088654 | Potato | nucleus | 26.54 | 13.15 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 30.25 | 12.79 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 25.31 | 12.73 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 25.31 | 12.69 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 24.07 | 12.62 |
| PGSC0003DMT400090953 | Potato | nucleus | 25.93 | 12.5 |
| CDY71564 | Canola | nucleus | 25.93 | 12.39 |
| CDY70782 | Canola | nucleus | 24.69 | 12.38 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 23.46 | 12.26 |
| PGSC0003DMT400095755 | Potato | nucleus | 25.93 | 12.21 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 22.22 | 11.73 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 24.07 | 11.17 |
| PGSC0003DMT400085256 | Potato | nucleus | 25.93 | 11.11 |
| PGSC0003DMT400077258 | Potato | nucleus | 26.54 | 11.03 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 24.07 | 10.74 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 22.84 | 10.39 |
| CDY67043 | Canola | nucleus | 24.69 | 10.23 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 19.75 | 9.64 |
| Solyc07g043080.1.1 | Tomato | cytosol | 6.79 | 8.87 |
| CDY05333 | Canola | nucleus | 20.37 | 8.75 |
| CDY05515 | Canola | nucleus | 20.37 | 8.75 |
| PGSC0003DMT400090516 | Potato | nucleus | 9.26 | 8.47 |
| PGSC0003DMT400086447 | Potato | cytosol | 9.88 | 8.33 |
| CDY05514 | Canola | nucleus | 16.05 | 7.22 |
| PGSC0003DMT400085623 | Potato | nucleus | 8.64 | 7.0 |
| PGSC0003DMT400086919 | Potato | nucleus | 8.02 | 5.28 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 8.64 | 4.96 |
| PGSC0003DMT400094113 | Potato | cytosol | 4.32 | 4.05 |
| PGSC0003DMT400094378 | Potato | nucleus | 3.09 | 3.21 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 1.85 | 1.84 |
| PGSC0003DMT400061722 | Potato | plastid | 0.62 | 0.96 |
| PGSC0003DMT400091747 | Potato | plastid | 0.62 | 0.66 |
| PGSC0003DMT400065010 | Potato | vacuole | 0.62 | 0.5 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 0.62 | 0.5 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078EU75 | EnsemblPlants:CDY04801 | ProteinID:CDY04801 | ProteinID:CDY04801.1 |
| GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00119499001 | InterPro:IPR002100 | InterPro:IPR036879 |
| InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0004EAEADA | SEG:seg |
Description
BnaC05g17880D
Coordinates
chrLK031957:-:889822..890310
Molecular Weight (calculated)
18897.4 Da
IEP (calculated)
10.473
GRAVY (calculated)
-0.530
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKVTHQL ISDNATRRVT FRKRKHGLLK KLKELTILCG LRACAIIYSD YEEGPEVWPN RKEVRVLLNR FRALPVEKQT KFMMDQKDLM NRMIQDAKKR
101: LEKEQMHSRA MELGLIASSN DIRDADYSED LVKAADVVEK KIKVIRERIK AVESGATILM IE
101: LEKEQMHSRA MELGLIASSN DIRDADYSED LVKAADVVEK KIKVIRERIK AVESGATILM IE
001: MGRRKVTHQL ISDNATRRVT FRKRKDGLLK KIYELTVLCG LPACAIIYSE YKDGPELWPN LNEVRSILNR LSELPVEKQT KYMMDQKDLM NKMIQDAEKK
101: LEKEKMHTRA MKLGLMAGSN DLITDTDCSE ELARAADVVD KKLKAIRERI KAVEAGAPII KRD
101: LEKEKMHTRA MKLGLMAGSN DLITDTDCSE ELARAADVVD KKLKAIRERI KAVEAGAPII KRD
Arabidopsis Description
AGL87AGAMOUS-like 87 [Source:UniProtKB/TrEMBL;Acc:Q7X9H1]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.