Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003073 | Potato | cytosol | 18.25 | 63.89 |
| PGSC0003DMT400086956 | Potato | nucleus | 22.75 | 58.5 |
| PGSC0003DMT400077258 | Potato | nucleus | 60.32 | 58.46 |
| PGSC0003DMT400089787 | Potato | cytosol | 25.4 | 55.17 |
| PGSC0003DMT400089454 | Potato | nucleus | 32.28 | 49.8 |
| PGSC0003DMT400089615 | Potato | cytosol | 30.42 | 48.32 |
| PGSC0003DMT400090516 | Potato | nucleus | 22.49 | 48.02 |
| PGSC0003DMT400088654 | Potato | nucleus | 40.21 | 46.48 |
| PGSC0003DMT400090586 | Potato | nucleus | 28.57 | 45.96 |
| PGSC0003DMT400087890 | Potato | cytosol | 13.49 | 45.54 |
| PGSC0003DMT400095755 | Potato | nucleus | 41.27 | 45.35 |
| PGSC0003DMT400090953 | Potato | nucleus | 39.95 | 44.94 |
| PGSC0003DMT400088489 | Potato | nucleus | 25.13 | 44.6 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 44.71 | 44.13 |
| PGSC0003DMT400095062 | Potato | nucleus | 32.8 | 43.97 |
| PGSC0003DMT400085623 | Potato | nucleus | 22.75 | 43.0 |
| PGSC0003DMT400061726 | Potato | nucleus | 37.04 | 42.81 |
| PGSC0003DMT400086447 | Potato | cytosol | 21.16 | 41.67 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 4.5 | 41.46 |
| PGSC0003DMT400073719 | Potato | nucleus | 28.57 | 41.38 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 12.7 | 41.03 |
| PGSC0003DMT400088008 | Potato | nucleus | 20.9 | 40.93 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 30.42 | 40.78 |
| PGSC0003DMT400095417 | Potato | cytosol | 13.76 | 40.62 |
| PGSC0003DMT400086919 | Potato | nucleus | 25.93 | 39.84 |
| PGSC0003DMT400094378 | Potato | nucleus | 16.4 | 39.74 |
| PGSC0003DMT400091747 | Potato | plastid | 15.34 | 38.16 |
| PGSC0003DMT400065010 | Potato | vacuole | 19.84 | 37.5 |
| PGSC0003DMT400094113 | Potato | cytosol | 16.67 | 36.42 |
| PGSC0003DMT400091650 | Potato | nucleus | 24.6 | 35.91 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 32.54 | 35.24 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 18.25 | 34.33 |
| PGSC0003DMT400061722 | Potato | plastid | 9.26 | 33.65 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 6.35 | 28.24 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 11.38 | 26.38 |
| Bra012335.1-P | Field mustard | mitochondrion | 11.11 | 25.93 |
| Bra024521.1-P | Field mustard | mitochondrion | 11.11 | 25.93 |
| CDY04801 | Canola | mitochondrion, nucleus | 11.11 | 25.93 |
| CDY21372 | Canola | mitochondrion | 11.11 | 25.93 |
| CDY25744 | Canola | mitochondrion | 11.11 | 25.93 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 15.87 | 25.86 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 10.85 | 25.0 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 14.29 | 24.43 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 14.81 | 24.35 |
| GSMUA_AchrUn_... | Banana | nucleus | 14.81 | 24.03 |
| Os03t0582400-01 | Rice | nucleus | 15.61 | 23.69 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 14.29 | 23.58 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 11.9 | 23.56 |
| OQU83806 | Sorghum | nucleus | 10.85 | 23.43 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 11.38 | 23.24 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 11.9 | 23.08 |
| KXG28892 | Sorghum | nucleus | 11.11 | 22.7 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 11.11 | 22.7 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 14.55 | 22.45 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 14.55 | 22.45 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 9.26 | 22.44 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 10.85 | 22.16 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 11.11 | 22.11 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 13.49 | 21.98 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 13.49 | 21.79 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 14.02 | 21.63 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 11.38 | 21.61 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 13.76 | 21.58 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 10.85 | 21.47 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 13.49 | 21.16 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 13.49 | 21.16 |
| TraesCS7D01G548500.1 | Wheat | plastid | 12.96 | 20.85 |
| KXG28893 | Sorghum | nucleus | 9.26 | 20.83 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 10.05 | 20.65 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 12.7 | 20.51 |
| EES10067 | Sorghum | mitochondrion | 11.11 | 20.39 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 13.23 | 20.16 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 12.43 | 19.92 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 12.43 | 19.92 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 14.55 | 19.78 |
| EES06917 | Sorghum | mitochondrion, nucleus | 13.23 | 19.3 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 9.52 | 19.15 |
| Zm00001d048894_P001 | Maize | mitochondrion | 12.43 | 19.03 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 11.38 | 18.94 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 11.38 | 18.94 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 12.96 | 18.85 |
| Zm00001d016791_P001 | Maize | mitochondrion | 14.29 | 18.82 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 12.96 | 18.77 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 12.96 | 18.77 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 11.9 | 18.67 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 11.9 | 18.67 |
| KXG28890 | Sorghum | mitochondrion | 12.43 | 18.43 |
| KXG38099 | Sorghum | plastid | 15.34 | 18.41 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 12.17 | 18.33 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 10.85 | 18.06 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 10.85 | 18.06 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 9.79 | 18.05 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 11.9 | 17.93 |
| OQU83804 | Sorghum | mitochondrion | 11.11 | 17.87 |
| KXG28888 | Sorghum | nucleus | 11.9 | 17.65 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 10.58 | 17.62 |
| KXG28889 | Sorghum | nucleus | 11.64 | 17.6 |
| KXG32310 | Sorghum | nucleus | 11.11 | 17.36 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 9.52 | 17.06 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 9.52 | 17.06 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 11.64 | 16.86 |
| EER91288 | Sorghum | mitochondrion, nucleus | 13.76 | 16.56 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 13.49 | 16.29 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 13.23 | 16.18 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 13.23 | 15.53 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 12.7 | 15.34 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 12.96 | 15.17 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 12.96 | 15.17 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 12.43 | 15.16 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 8.47 | 15.09 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 11.64 | 13.25 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 10.32 | 12.7 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 11.11 | 11.57 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 10.58 | 11.24 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:M1D936 | PFAM:PF00319 |
| EnsemblPlantsGene:PGSC0003DMG400034827 | PGSC:PGSC0003DMG400034827 | EnsemblPlants:PGSC0003DMT400085256 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF153 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000295C8DE |
| SEG:seg | : | : | : | : | : |
Description
Type I MADS box transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400034827]
Coordinates
chr4:-:23826227..23827363
Molecular Weight (calculated)
42467.3 Da
IEP (calculated)
7.382
GRAVY (calculated)
-0.343
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRNKVKFAL IENENDRKVS YKKREKGFLT KAEELRTLCD VEMAAILYSP FNNEPKVFPN NGAAITTFEK LVELPTLKKS KNMVTSDEFT KKRIEKLNEK
101: LLKVRKKNKV KEVTNEMYEM LKGKEISIDM HPYDLNDLSY VIKQKLIQVS KAMKKNVCEQ DSTSNVPQSF VGPMIPGGTN IEGSKASVLS PTSFPLSIVP
201: LFSPLTILGG TYFERREDSL FAPNVAPTRM PQEMFHQEDP LRTPFQEFPL VDSSQFPASP LSFSHMFPPM VPQLFSPLPL LMDFSVPSTT TDSPIPLAPL
301: ASVLSAPVCS PMTSQIFSTT SACVSMPMNN YKNYSLDIPE SLSFSELLNW NNGEAMTLLE DPSLNNINVK DLKNTNNN
101: LLKVRKKNKV KEVTNEMYEM LKGKEISIDM HPYDLNDLSY VIKQKLIQVS KAMKKNVCEQ DSTSNVPQSF VGPMIPGGTN IEGSKASVLS PTSFPLSIVP
201: LFSPLTILGG TYFERREDSL FAPNVAPTRM PQEMFHQEDP LRTPFQEFPL VDSSQFPASP LSFSHMFPPM VPQLFSPLPL LMDFSVPSTT TDSPIPLAPL
301: ASVLSAPVCS PMTSQIFSTT SACVSMPMNN YKNYSLDIPE SLSFSELLNW NNGEAMTLLE DPSLNNINVK DLKNTNNN
001: MTRKKVKLAY ISNDSSRKAT FKKRKKGLMK KVHELSTLCG ITACAIIYSP YDTNPEVWPS NSGVQRVVSE FRTLPEMDQH KKMVDQEGFL KQRIAKATET
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H
101: LRRQRKDSRE LEMTEVMFQC LIGNMEMFHL NIVDLNDLGY MIEQYLKDVN RRIEILRNSG TEIGESSSVA VAASEGNIPM PNLVATTAPT TTIYEVGSSS
201: SFAAVANFVN PIDLQQFRHP AAQHVGLNEQ PQNLNLNLNQ NYNQNQEWFM EMMNHPEQMR YQTEQMGYQF MDDNHHNHIH HQPQEHQHQI HDESSNALDA
301: ANSSSIIPVT SSSITNKTWF H
Arabidopsis Description
AGL80Agamous-like MADS-box protein AGL80 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.