Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400088654 | Potato | nucleus | 86.39 | 56.27 |
| PGSC0003DMT400090953 | Potato | nucleus | 87.79 | 55.65 |
| PGSC0003DMT400089787 | Potato | cytosol | 43.66 | 53.45 |
| PGSC0003DMT400095755 | Potato | nucleus | 85.45 | 52.91 |
| PGSC0003DMT400095062 | Potato | nucleus | 58.69 | 44.33 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 7.98 | 41.46 |
| PGSC0003DMT400086919 | Potato | nucleus | 46.48 | 40.24 |
| PGSC0003DMT400089454 | Potato | nucleus | 45.07 | 39.18 |
| PGSC0003DMT400086956 | Potato | nucleus | 25.82 | 37.41 |
| PGSC0003DMT400091650 | Potato | nucleus | 45.07 | 37.07 |
| PGSC0003DMT400003073 | Potato | cytosol | 17.84 | 35.19 |
| PGSC0003DMT400094378 | Potato | nucleus | 23.47 | 32.05 |
| PGSC0003DMT400085623 | Potato | nucleus | 29.58 | 31.5 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 49.3 | 30.09 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 16.43 | 29.91 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 11.74 | 29.41 |
| PGSC0003DMT400077258 | Potato | nucleus | 53.52 | 29.23 |
| PGSC0003DMT400085256 | Potato | nucleus | 44.6 | 25.13 |
| PGSC0003DMT400073719 | Potato | nucleus | 30.05 | 24.52 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 42.72 | 23.76 |
| PGSC0003DMT400091747 | Potato | plastid | 16.9 | 23.68 |
| PGSC0003DMT400090586 | Potato | nucleus | 25.35 | 22.98 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 24.88 | 22.84 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 17.37 | 22.56 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 16.9 | 22.09 |
| PGSC0003DMT400094113 | Potato | cytosol | 17.84 | 21.97 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 15.96 | 21.79 |
| Bra012335.1-P | Field mustard | mitochondrion | 16.43 | 21.6 |
| Bra024521.1-P | Field mustard | mitochondrion | 16.43 | 21.6 |
| CDY04801 | Canola | mitochondrion, nucleus | 16.43 | 21.6 |
| CDY21372 | Canola | mitochondrion | 16.43 | 21.6 |
| CDY25744 | Canola | mitochondrion | 16.43 | 21.6 |
| OQU83806 | Sorghum | nucleus | 16.9 | 20.57 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 17.84 | 20.54 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 22.07 | 20.43 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 18.31 | 20.42 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 21.13 | 20.36 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 22.07 | 20.09 |
| TraesCS7D01G548500.1 | Wheat | plastid | 22.07 | 20.0 |
| PGSC0003DMT400090516 | Potato | nucleus | 16.43 | 19.77 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 21.6 | 19.66 |
| PGSC0003DMT400061726 | Potato | nucleus | 30.05 | 19.57 |
| KXG28892 | Sorghum | nucleus | 16.9 | 19.46 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 16.9 | 19.46 |
| KXG32310 | Sorghum | nucleus | 22.07 | 19.42 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 20.66 | 18.97 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 16.43 | 18.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.66 | 18.88 |
| Os03t0582400-01 | Rice | nucleus | 22.07 | 18.88 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 21.6 | 18.78 |
| EES06917 | Sorghum | mitochondrion, nucleus | 22.54 | 18.53 |
| PGSC0003DMT400089615 | Potato | cytosol | 20.66 | 18.49 |
| KXG28893 | Sorghum | nucleus | 14.55 | 18.45 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 23.94 | 18.35 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 19.72 | 18.34 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 16.43 | 18.32 |
| PGSC0003DMT400061722 | Potato | plastid | 8.92 | 18.27 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 20.66 | 18.26 |
| PGSC0003DMT400088008 | Potato | nucleus | 16.43 | 18.13 |
| PGSC0003DMT400065010 | Potato | vacuole | 16.9 | 18.0 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 20.66 | 17.96 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 20.66 | 17.96 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 16.9 | 17.91 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 20.19 | 17.84 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 19.72 | 17.8 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 19.72 | 17.43 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 20.19 | 17.13 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 18.78 | 16.95 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 15.49 | 16.92 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 14.55 | 16.85 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 15.02 | 16.84 |
| Zm00001d016791_P001 | Maize | mitochondrion | 22.54 | 16.72 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 18.78 | 16.6 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 18.78 | 16.6 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 19.25 | 16.53 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 20.19 | 16.48 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 20.19 | 16.48 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 19.25 | 16.33 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 17.37 | 16.3 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 17.37 | 16.3 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 19.72 | 16.15 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 19.72 | 16.09 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 15.02 | 16.08 |
| KXG28890 | Sorghum | mitochondrion | 19.25 | 16.08 |
| EES10067 | Sorghum | mitochondrion | 15.49 | 16.02 |
| Zm00001d048894_P001 | Maize | mitochondrion | 18.31 | 15.79 |
| KXG28889 | Sorghum | nucleus | 18.31 | 15.6 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 15.49 | 15.57 |
| KXG38099 | Sorghum | plastid | 23.0 | 15.56 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 13.62 | 15.43 |
| KXG28888 | Sorghum | nucleus | 18.31 | 15.29 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 15.96 | 14.98 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 15.96 | 14.98 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 21.6 | 14.7 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 14.08 | 14.63 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 19.25 | 14.54 |
| EER91288 | Sorghum | mitochondrion, nucleus | 21.13 | 14.33 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 14.08 | 14.22 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 20.66 | 14.06 |
| OQU83804 | Sorghum | mitochondrion | 15.49 | 14.04 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 13.62 | 13.74 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 14.55 | 13.66 |
| PGSC0003DMT400087890 | Potato | cytosol | 7.04 | 13.39 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 17.84 | 12.3 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 18.31 | 12.07 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 18.31 | 12.07 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 17.37 | 11.94 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 17.37 | 11.49 |
| PGSC0003DMT400095417 | Potato | cytosol | 6.57 | 10.94 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 15.49 | 10.75 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 16.43 | 10.54 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 15.96 | 9.37 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 15.49 | 9.27 |
| PGSC0003DMT400086447 | Potato | cytosol | 7.04 | 7.81 |
Protein Annotations
| EntrezGene:107061890 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:M1DG31 | InterPro:MADS_SRF-like | PFAM:PF00319 |
| EnsemblPlantsGene:PGSC0003DMG400038060 | PGSC:PGSC0003DMG400038060 | EnsemblPlants:PGSC0003DMT400088489 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF355 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000295737B |
| RefSeq:XP_015167330.1 | SEG:seg | : | : | : | : |
Description
MADS-box protein AGL35 [Source:PGSC_GENE;Acc:PGSC0003DMG400038060]
Coordinates
chr5:+:38909497..38910506
Molecular Weight (calculated)
24246.4 Da
IEP (calculated)
5.846
GRAVY (calculated)
-0.487
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRNKVNYAL IEDASQRKVS GNKRLKGLLK KSDELKTLCD VEVATVIYDP YRNEPYTFPN NDIVPNTFIK FKELPTLERS KNMVTREEFT MQRIKKLEEQ
101: LQKVLDSPIP SPMMDSLVPS PMIDSPMPSL MMAPPMYSPV SSTMTHQMEP TMDIPSIGVS TSMNNNQNPS VDLPDSPTIS GFLNWKDDVV MTLFDVPFLK
201: NINVQDPNHT KKF
101: LQKVLDSPIP SPMMDSLVPS PMIDSPMPSL MMAPPMYSPV SSTMTHQMEP TMDIPSIGVS TSMNNNQNPS VDLPDSPTIS GFLNWKDDVV MTLFDVPFLK
201: NINVQDPNHT KKF
001: MKRKMKLSLI ENSVSRKTTF TKRKKGMTKK LTELVTLCGV EACAVVYSPF NSIPEAWPSR EGVEDVVSKF MELSVLDRTK KMVDQETFIS QRIAKEKEQL
101: QKLRDENHNS QIRELMFGCL KGETNVYNLD GRDLQDLSLY IDKYLNGLTR RIEILIENGE SSSSLPLPIV ANAAAPVGFD GPMFQYHNQN QQKPVQFQYQ
201: ALYDFYDQIP KKIHGFNMNM NKDSNQSMVL DLNQNLNDGE DEGIPCMDNN NYHPEIDCLA TVTTAPTDVC APNITNDL
101: QKLRDENHNS QIRELMFGCL KGETNVYNLD GRDLQDLSLY IDKYLNGLTR RIEILIENGE SSSSLPLPIV ANAAAPVGFD GPMFQYHNQN QQKPVQFQYQ
201: ALYDFYDQIP KKIHGFNMNM NKDSNQSMVL DLNQNLNDGE DEGIPCMDNN NYHPEIDCLA TVTTAPTDVC APNITNDL
Arabidopsis Description
PHE2MADS-box transcription factor PHERES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJK8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.