Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG28892 | Sorghum | nucleus | 98.21 | 89.19 |
| OQU83806 | Sorghum | nucleus | 88.1 | 84.57 |
| EES10067 | Sorghum | mitochondrion | 75.6 | 61.65 |
| KXG28889 | Sorghum | nucleus | 81.55 | 54.8 |
| Zm00001d048894_P001 | Maize | mitochondrion | 76.79 | 52.23 |
| KXG28888 | Sorghum | nucleus | 64.29 | 42.35 |
| KXG28890 | Sorghum | mitochondrion | 62.5 | 41.18 |
| OQU83804 | Sorghum | mitochondrion | 55.95 | 40.0 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 7.14 | 29.27 |
| KXG32310 | Sorghum | nucleus | 41.67 | 28.93 |
| KRH33740 | Soybean | nucleus | 26.19 | 27.67 |
| KRG88863 | Soybean | mitochondrion, nucleus | 22.02 | 26.43 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 17.86 | 25.21 |
| KRG98150 | Soybean | mitochondrion, nucleus | 25.0 | 25.15 |
| KRH30113 | Soybean | nucleus | 25.6 | 25.15 |
| CDY71896 | Canola | nucleus | 25.6 | 25.0 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 33.93 | 24.78 |
| KRH30476 | Soybean | nucleus | 22.02 | 24.67 |
| KRH72060 | Soybean | nucleus | 25.0 | 24.56 |
| EES06917 | Sorghum | mitochondrion, nucleus | 37.5 | 24.32 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 33.33 | 24.14 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.33 | 24.03 |
| VIT_14s0060g00300.t01 | Wine grape | nucleus | 32.74 | 23.31 |
| Bra005166.1-P | Field mustard | mitochondrion, nucleus | 17.26 | 23.2 |
| AT5G26630.1 | Thale cress | nucleus | 29.76 | 22.94 |
| KRG89836 | Soybean | nucleus | 20.24 | 22.82 |
| KRH30119 | Soybean | cytosol | 21.43 | 22.36 |
| Bra009913.1-P | Field mustard | nucleus | 26.79 | 22.17 |
| CDY33537 | Canola | nucleus | 25.6 | 21.94 |
| CDX88234 | Canola | nucleus | 23.81 | 21.86 |
| CDX80580 | Canola | nucleus | 26.19 | 21.78 |
| KRG98149 | Soybean | nucleus | 27.38 | 21.6 |
| CDY64992 | Canola | mitochondrion, nucleus | 19.64 | 21.43 |
| PGSC0003DMT400003073 | Potato | cytosol | 13.69 | 21.3 |
| KXG38099 | Sorghum | plastid | 39.88 | 21.27 |
| KRH66114 | Soybean | nucleus | 25.0 | 21.21 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 29.17 | 21.12 |
| KRG98148 | Soybean | nucleus | 28.57 | 20.96 |
| Solyc01g102260.2.1 | Tomato | nucleus | 30.95 | 20.88 |
| PGSC0003DMT400089787 | Potato | cytosol | 21.43 | 20.69 |
| KRH30919 | Soybean | nucleus | 29.76 | 20.66 |
| KRG98152 | Soybean | nucleus | 23.21 | 20.53 |
| KRG97962 | Soybean | nucleus | 29.17 | 20.5 |
| PGSC0003DMT400086956 | Potato | nucleus | 17.86 | 20.41 |
| KRH66052 | Soybean | mitochondrion, nucleus | 26.79 | 20.0 |
| KRH30473 | Soybean | mitochondrion, nucleus | 26.19 | 19.91 |
| Bra020555.1-P | Field mustard | nucleus | 25.6 | 19.91 |
| CDY05540 | Canola | nucleus | 25.6 | 19.91 |
| CDY25000 | Canola | nucleus | 25.6 | 19.91 |
| KRG98142 | Soybean | nucleus | 31.55 | 19.85 |
| CDY21372 | Canola | mitochondrion | 19.05 | 19.75 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 28.57 | 19.59 |
| KRG98143 | Soybean | nucleus | 24.4 | 19.43 |
| Bra024521.1-P | Field mustard | mitochondrion | 18.45 | 19.14 |
| CDY04801 | Canola | mitochondrion, nucleus | 18.45 | 19.14 |
| Bra012335.1-P | Field mustard | mitochondrion | 17.86 | 18.52 |
| CDY25744 | Canola | mitochondrion | 17.86 | 18.52 |
| EER91288 | Sorghum | mitochondrion, nucleus | 34.52 | 18.47 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 17.86 | 18.4 |
| KRH30472 | Soybean | nucleus | 23.21 | 18.4 |
| AT5G35120.1 | Thale cress | cytosol | 11.31 | 17.76 |
| AT1G65300.1 | Thale cress | nucleus | 28.57 | 17.27 |
| KRG98147 | Soybean | mitochondrion, nucleus | 26.19 | 17.12 |
| KRG88915 | Soybean | mitochondrion, nucleus | 20.83 | 16.91 |
| KRH72066 | Soybean | mitochondrion, nucleus | 20.24 | 16.5 |
| Bra029469.1-P | Field mustard | nucleus | 29.17 | 16.12 |
| CDY60402 | Canola | nucleus | 29.17 | 16.12 |
| CDY27735 | Canola | nucleus | 25.6 | 16.1 |
| AT1G65330.1 | Thale cress | nucleus | 26.19 | 15.77 |
| Bra018490.1-P | Field mustard | nucleus | 26.19 | 15.17 |
| CDX97329 | Canola | nucleus | 26.19 | 15.17 |
| AT1G59930.1 | Thale cress | cytosol | 11.9 | 15.15 |
| AT3G05860.1 | Thale cress | nucleus | 23.21 | 15.0 |
| CDX80577 | Canola | mitochondrion, nucleus | 26.19 | 14.62 |
| Bra039404.1-P | Field mustard | nucleus | 26.19 | 14.57 |
| PGSC0003DMT400088489 | Potato | nucleus | 18.45 | 14.55 |
| CDX88231 | Canola | nucleus | 23.81 | 14.49 |
| CDY38696 | Canola | nucleus | 23.81 | 14.39 |
| Bra035448.1-P | Field mustard | nucleus | 22.02 | 14.02 |
| Bra035449.1-P | Field mustard | nucleus | 22.02 | 14.02 |
| PGSC0003DMT400089454 | Potato | nucleus | 20.24 | 13.88 |
| CDY71564 | Canola | nucleus | 27.98 | 13.86 |
| KRH30471 | Soybean | nucleus | 25.0 | 13.86 |
| PGSC0003DMT400073719 | Potato | nucleus | 21.43 | 13.79 |
| AT5G27960.1 | Thale cress | nucleus | 26.19 | 13.75 |
| AT5G48670.1 | Thale cress | nucleus | 26.19 | 13.71 |
| KRG88914 | Soybean | cytosol | 17.86 | 13.7 |
| AT2G28700.1 | Thale cress | nucleus | 26.79 | 13.68 |
| PGSC0003DMT400091650 | Potato | nucleus | 20.83 | 13.51 |
| KRG98146 | Soybean | nucleus | 26.19 | 13.41 |
| Bra020552.1-P | Field mustard | nucleus | 26.79 | 13.2 |
| CDY18830 | Canola | nucleus | 26.79 | 13.08 |
| CDY70782 | Canola | nucleus | 25.0 | 13.0 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 27.98 | 12.91 |
| CDY05207 | Canola | nucleus | 25.6 | 12.87 |
| KRG88862 | Soybean | nucleus | 23.81 | 12.78 |
| PGSC0003DMT400090586 | Potato | nucleus | 17.86 | 12.77 |
| AT1G31630.1 | Thale cress | mitochondrion | 25.6 | 12.68 |
| Bra041022.1-P | Field mustard | nucleus | 25.0 | 12.57 |
| PGSC0003DMT400090953 | Potato | nucleus | 25.0 | 12.5 |
| Bra020550.1-P | Field mustard | nucleus | 27.98 | 12.37 |
| PGSC0003DMT400088654 | Potato | nucleus | 23.81 | 12.23 |
| Bra020524.1-P | Field mustard | nucleus | 26.19 | 12.22 |
| CDY05514 | Canola | nucleus | 26.19 | 12.22 |
| CDY27734 | Canola | nucleus | 24.4 | 12.2 |
| CDY05515 | Canola | nucleus | 27.38 | 12.2 |
| AT5G26650.1 | Thale cress | nucleus | 26.19 | 12.02 |
| CDY05333 | Canola | nucleus | 26.79 | 11.94 |
| PGSC0003DMT400088008 | Potato | nucleus | 13.69 | 11.92 |
| Bra020525.1-P | Field mustard | nucleus | 27.38 | 11.65 |
| PGSC0003DMT400095755 | Potato | nucleus | 23.21 | 11.34 |
| CDY67043 | Canola | nucleus | 26.19 | 11.25 |
| AT5G26580.1 | Thale cress | nucleus | 22.62 | 11.01 |
| Bra040248.1-P | Field mustard | nucleus | 26.79 | 10.9 |
| PGSC0003DMT400095062 | Potato | nucleus | 17.86 | 10.64 |
| PGSC0003DMT400061726 | Potato | nucleus | 19.64 | 10.09 |
| PGSC0003DMT400087890 | Potato | cytosol | 6.55 | 9.82 |
| PGSC0003DMT400095426 | Potato | mitochondrion | 20.24 | 9.74 |
| AT1G31640.1 | Thale cress | mitochondrion | 26.79 | 9.7 |
| PGSC0003DMT400061724 | Potato | mitochondrion, nucleus | 22.02 | 9.66 |
| PGSC0003DMT400090516 | Potato | nucleus | 10.12 | 9.6 |
| PGSC0003DMT400077258 | Potato | nucleus | 22.02 | 9.49 |
| PGSC0003DMT400095417 | Potato | cytosol | 7.14 | 9.38 |
| PGSC0003DMT400085256 | Potato | nucleus | 20.83 | 9.26 |
| PGSC0003DMT400085623 | Potato | nucleus | 10.12 | 8.5 |
| PGSC0003DMT400086447 | Potato | cytosol | 8.33 | 7.29 |
| PGSC0003DMT400086919 | Potato | nucleus | 10.12 | 6.91 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 5.36 | 5.52 |
| PGSC0003DMT400085114 | Potato | cytosol, endoplasmic reticulum, nucleus | 8.93 | 5.32 |
| Solyc07g043080.1.1 | Tomato | cytosol | 3.57 | 4.84 |
| PGSC0003DMT400094378 | Potato | nucleus | 4.17 | 4.49 |
| PGSC0003DMT400094113 | Potato | cytosol | 3.57 | 3.47 |
| PGSC0003DMT400085093 | Potato | extracellular, plastid, vacuole | 3.57 | 2.99 |
| PGSC0003DMT400061722 | Potato | plastid | 1.79 | 2.88 |
| PGSC0003DMT400097522 | Potato | cytosol, extracellular, mitochondrion, nucleus | 1.79 | 2.56 |
| PGSC0003DMT400065010 | Potato | vacuole | 2.98 | 2.5 |
| PGSC0003DMT400089615 | Potato | cytosol | 2.98 | 2.1 |
| PGSC0003DMT400091747 | Potato | plastid | 1.79 | 1.97 |
Protein Annotations
| EnsemblPlants:KXG28893 | EnsemblPlantsGene:SORBI_3005G180300 | Gene3D:3.40.1810.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF153 | PFAM:PF00319 | ProteinID:KXG28893 | ProteinID:KXG28893.1 |
| SUPFAM:SSF55455 | UniParc:UPI00081AE85F | UniProt:A0A1B6PTA1 | MapMan:15.5.14 | : | : |
Description
hypothetical protein
Coordinates
chr5:-:66308263..66308820
Molecular Weight (calculated)
18858.1 Da
IEP (calculated)
9.265
GRAVY (calculated)
-0.504
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHKKRCSKS LEKKASELTT LCGIKLCVVV YGQGEAQPKV WPSNEEAKDL LMKFNRRLDV SSLKKTKNQE EFLQSRSLKL HEQVSKLDLE NREHVTLDVL
101: HDSMVGGRPG LVGSNKGELL SLRDMVDMKM RKIEARLQQL AVGEEVLPQP LPQDSYNLGA CSMLPSAK
101: HDSMVGGRPG LVGSNKGELL SLRDMVDMKM RKIEARLQQL AVGEEVLPQP LPQDSYNLGA CSMLPSAK
001: MGREQQVKSK KIEENKGMVN EKGRRTNYII LCAVKACIIM FSPHEVEPMV WPSFEKARDL LDGFFALPDI KKKKKQMSLE MYLKEKTKKV HEQFMKTQRK
101: HMDHVTDQLM VELHRGRRLD DLDLSEINAL ISFSRENIIL LRKELEFVQH SPLGDPRVPP FEAQFEELTT IANDVFVRGG QVDERAWKNY EATKRVSIGN
201: ALRGNQSHYL VDKWLFASPK PREPTNQSRL TYQTIFYTKE AVATDALIWI
101: HMDHVTDQLM VELHRGRRLD DLDLSEINAL ISFSRENIIL LRKELEFVQH SPLGDPRVPP FEAQFEELTT IANDVFVRGG QVDERAWKNY EATKRVSIGN
201: ALRGNQSHYL VDKWLFASPK PREPTNQSRL TYQTIFYTKE AVATDALIWI
Arabidopsis Description
AGL95AGAMOUS-like 95 [Source:UniProtKB/TrEMBL;Acc:Q6DR69]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.