Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05540 | Canola | nucleus | 95.83 | 95.83 |
| AT5G26630.1 | Thale cress | nucleus | 62.96 | 62.39 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 11.11 | 58.54 |
| CDX80580 | Canola | nucleus | 54.17 | 57.92 |
| CDX88234 | Canola | nucleus | 47.69 | 56.28 |
| CDY33537 | Canola | nucleus | 38.43 | 42.35 |
| CDY71896 | Canola | nucleus | 27.78 | 34.88 |
| CDY64992 | Canola | mitochondrion, nucleus | 24.54 | 34.42 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 13.43 | 34.12 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 23.61 | 32.69 |
| CDX97329 | Canola | nucleus | 42.59 | 31.72 |
| CDY60402 | Canola | nucleus | 44.44 | 31.58 |
| CDY25744 | Canola | mitochondrion | 23.15 | 30.86 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 30.56 | 29.86 |
| CDY21372 | Canola | mitochondrion | 22.22 | 29.63 |
| CDY04801 | Canola | mitochondrion, nucleus | 21.76 | 29.01 |
| EES10067 | Sorghum | mitochondrion | 26.85 | 28.16 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 29.63 | 27.83 |
| KXG28892 | Sorghum | nucleus | 23.61 | 27.57 |
| OQU83806 | Sorghum | nucleus | 22.22 | 27.43 |
| CDY05207 | Canola | nucleus | 42.13 | 27.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.17 | 27.04 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 23.15 | 26.32 |
| CDY27734 | Canola | nucleus | 40.74 | 26.19 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 29.63 | 26.12 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 23.15 | 25.64 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 19.44 | 25.61 |
| KXG28893 | Sorghum | nucleus | 19.91 | 25.6 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 22.22 | 25.13 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 23.15 | 25.13 |
| TraesCS7D01G548500.1 | Wheat | plastid | 27.31 | 25.11 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 26.85 | 25.0 |
| PGSC0003DMT400003073 | Potato | cytosol | 12.5 | 25.0 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 26.39 | 24.57 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 20.83 | 24.46 |
| KXG28889 | Sorghum | nucleus | 28.24 | 24.4 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 26.39 | 24.36 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 26.39 | 24.36 |
| CDY27735 | Canola | nucleus | 30.09 | 24.34 |
| Zm00001d048894_P001 | Maize | mitochondrion | 27.78 | 24.29 |
| OQU83804 | Sorghum | mitochondrion | 26.39 | 24.26 |
| KXG28890 | Sorghum | mitochondrion | 28.24 | 23.92 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 20.37 | 23.78 |
| KXG28888 | Sorghum | nucleus | 27.78 | 23.53 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 24.54 | 23.35 |
| CDX80577 | Canola | mitochondrion, nucleus | 31.94 | 22.92 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 24.07 | 22.91 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 26.39 | 22.71 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 26.39 | 22.71 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 29.17 | 22.66 |
| EES06917 | Sorghum | mitochondrion, nucleus | 26.85 | 22.39 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 19.44 | 22.34 |
| KXG32310 | Sorghum | nucleus | 25.0 | 22.31 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 21.76 | 22.27 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 26.85 | 22.22 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 26.85 | 22.22 |
| Os03t0582400-01 | Rice | nucleus | 25.46 | 22.09 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 19.44 | 21.99 |
| Zm00001d016791_P001 | Maize | mitochondrion | 29.17 | 21.95 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 26.39 | 21.84 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 23.15 | 21.83 |
| CDX88231 | Canola | nucleus | 27.78 | 21.74 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 18.52 | 21.62 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 25.93 | 21.54 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 20.83 | 21.33 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 24.07 | 21.22 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 24.07 | 21.22 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 18.06 | 21.08 |
| CDY38696 | Canola | nucleus | 26.85 | 20.86 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 21.76 | 20.7 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 21.76 | 20.7 |
| CDY71564 | Canola | nucleus | 31.48 | 20.06 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 18.98 | 20.0 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 22.22 | 19.92 |
| CDY70782 | Canola | nucleus | 29.63 | 19.81 |
| KXG38099 | Sorghum | plastid | 28.7 | 19.68 |
| CDY18830 | Canola | nucleus | 31.02 | 19.48 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 20.83 | 18.67 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 20.37 | 18.64 |
| CDY05333 | Canola | nucleus | 32.41 | 18.57 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 21.3 | 18.55 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 18.06 | 18.4 |
| CDY05515 | Canola | nucleus | 31.94 | 18.3 |
| EER91288 | Sorghum | mitochondrion, nucleus | 26.39 | 18.15 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 19.91 | 17.84 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 19.91 | 17.84 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 19.44 | 17.8 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 18.52 | 17.62 |
| CDY67043 | Canola | nucleus | 31.48 | 17.39 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 18.98 | 17.01 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 24.07 | 16.15 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 23.61 | 15.79 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 22.69 | 15.65 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 23.15 | 15.48 |
| CDY05514 | Canola | nucleus | 25.46 | 15.28 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 21.76 | 15.02 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 20.37 | 14.33 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 20.37 | 14.24 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 18.98 | 13.23 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 21.3 | 12.92 |
| CDY05205 | Canola | cytosol, mitochondrion, nucleus | 9.26 | 12.27 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 19.91 | 11.85 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 18.06 | 11.75 |
| PGSC0003DMT400089615 | Potato | cytosol | 3.24 | 2.94 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078GER9 | UniProt:A0A078GER9 | EnsemblPlants:CDY25000 | ProteinID:CDY25000 |
| ProteinID:CDY25000.1 | ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00028815001 |
| InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI0004EC54A4 | SEG:seg | : | : | : | : |
Description
BnaC02g40080DBnaC02g40080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GER9]
Coordinates
chrLK032167:+:153221..153871
Molecular Weight (calculated)
24549.6 Da
IEP (calculated)
9.818
GRAVY (calculated)
-0.644
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRQKVKMAF IENESSRKAT YKKRKRGILK KANELATLCG VPVGVIIDSP YDLTPEVWPS REDMDNVLSQ WQRLPVMDRT KKMLNQESYL KQSISKATET
101: CKKLTKENKE LEMKEVMFDC LSGKTSPPRI EKSDLRGCGN VIEQYLRNLN RRIEILSKND GASSSSVHAA ATTSVAMPIV ELGSSSTAFC DMIRQQQIQS
201: NMNQNVRGLD LNQQQW
101: CKKLTKENKE LEMKEVMFDC LSGKTSPPRI EKSDLRGCGN VIEQYLRNLN RRIEILSKND GASSSSVHAA ATTSVAMPIV ELGSSSTAFC DMIRQQQIQS
201: NMNQNVRGLD LNQQQW
001: MTRQKVKMTF IENETARKST FKKRKKGLLK KAQELGILCG VPIFAVVNSP YELNPEVWPS REAANQVVSQ WKTMSVMDKT KKMVNQETFL QQRITKATES
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
101: WKKLRKENKE LEMKNIMFDC LSGKTLVSSI EKTELRDFGY VIEQQLKDVN RRIEILKRNN EPSSALVPVA APTTSSVMPV VEMGSSSVGF YDKVRDQIQI
201: TLNMKQTTND LDLNKKQW
Arabidopsis Description
MADS-box protein AGL35 [Source:UniProtKB/TrEMBL;Acc:Q7XJK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.