Factsheet for Bra020524.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000392.1-P
Bra002480.1-P
Bra002611.1-P
Bra004007.1-P
Bra004361.1-P
Bra004927.1-P
Bra007829.1-P
Bra009436.1-P
Bra009911.1-P
Bra011938.1-P
Bra015643.1-P
Bra017376.1-P
Bra018296.1-P
Bra020242.1-P
Bra020245.1-P
Bra020246.1-P
Bra020247.1-P
Bra020524.1-P
Bra020525.1-P
Bra020550.1-P
Bra020552.1-P
Bra020600.1-P
Bra022341.1-P
Bra025126.1-P
Bra026543.1-P
Bra031864.1-P
Bra032057.1-P
Bra033467.1-P
Bra035685.1-P
Bra037571.1-P
Bra038326.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G31630.1	Bra011938.1-P	AT1G01530.1	15805477
AT1G31630.1	Bra035685.1-P	AT1G01530.1	15805477
AT1G31630.1	Bra011938.1-P	AT1G65360.1	15805477
AT1G31630.1	Bra035685.1-P	AT1G65360.1	15805477
AT1G31630.1	Bra004007.1-P	AT1G69120.1	15805477
AT1G31630.1	Bra004361.1-P	AT1G69120.1	15805477
AT1G31630.1	Bra038326.1-P	AT1G69120.1	15805477
AT1G31630.1	Bra017376.1-P	AT2G03710.1	15805477
AT1G31630.1	Bra025126.1-P	AT2G03710.1	15805477
AT1G31630.1	Bra026543.1-P	AT2G03710.1	15805477
AT1G31630.1	Bra007829.1-P	AT2G24840.1	18713950
AT1G31630.1	Bra032057.1-P	AT2G24840.1	18713950
AT1G31630.1	Bra000392.1-P	AT2G45650.1	15805477
AT1G31630.1	Bra004927.1-P	AT2G45650.1	15805477
AT1G31630.1	Bra011938.1-P	AT4G36590.1	15805477
AT1G31630.1	Bra035685.1-P	AT4G36590.1	15805477
AT1G31630.1	Bra009911.1-P	AT5G27960.1	15805477
AT1G31630.1	Bra020524.1-P	AT5G27960.1	15805477
AT1G31630.1	Bra020525.1-P	AT5G27960.1	15805477
AT1G31630.1	Bra020550.1-P	AT5G27960.1	15805477
AT1G31630.1	Bra020552.1-P	AT5G27960.1	15805477
AT1G31630.1	Bra002611.1-P	AT5G58890.1	15805477
AT1G31630.1	Bra002480.1-P	AT5G60440.1	15805477
AT1G31630.1	Bra020242.1-P	AT5G60440.1	15805477
AT1G31630.1	Bra020245.1-P	AT5G60440.1	15805477
AT1G31630.1	Bra020246.1-P	AT5G60440.1	15805477
AT1G31630.1	Bra020247.1-P	AT5G60440.1	15805477
AT1G31640.1	Bra011938.1-P	AT1G65360.1	15805477
AT1G31640.1	Bra035685.1-P	AT1G65360.1	15805477
AT1G31640.1	Bra004007.1-P	AT1G69120.1	15805477
AT1G31640.1	Bra004361.1-P	AT1G69120.1	15805477
AT1G31640.1	Bra038326.1-P	AT1G69120.1	15805477
AT1G31640.1	Bra017376.1-P	AT2G03710.1	15805477
AT1G31640.1	Bra025126.1-P	AT2G03710.1	15805477
AT1G31640.1	Bra026543.1-P	AT2G03710.1	15805477
AT1G31640.1	Bra000392.1-P	AT2G45650.1	15805477
AT1G31640.1	Bra004927.1-P	AT2G45650.1	15805477
AT1G31640.1	Bra022341.1-P	AT3G18650.1	15805477
AT1G31640.1	Bra037571.1-P	AT3G18650.1	15805477
AT1G31640.1	Bra009911.1-P	AT5G27960.1	15805477
AT1G31640.1	Bra020524.1-P	AT5G27960.1	15805477
AT1G31640.1	Bra020525.1-P	AT5G27960.1	15805477
AT1G31640.1	Bra020550.1-P	AT5G27960.1	15805477
AT1G31640.1	Bra020552.1-P	AT5G27960.1	15805477
AT1G31640.1	Bra002480.1-P	AT5G60440.1	15805477
AT1G31640.1	Bra020242.1-P	AT5G60440.1	15805477
AT1G31640.1	Bra020245.1-P	AT5G60440.1	15805477
AT1G31640.1	Bra020246.1-P	AT5G60440.1	15805477
AT1G31640.1	Bra020247.1-P	AT5G60440.1	15805477
AT1G31640.1	Bra031864.1-P	AT5G65330.1	15805477
AT1G65300.1	Bra011938.1-P	AT1G01530.1	15805477
AT1G65300.1	Bra035685.1-P	AT1G01530.1	15805477
AT1G65300.1	Bra007829.1-P	AT2G24840.1	18713950
AT1G65300.1	Bra032057.1-P	AT2G24840.1	18713950
AT1G65300.1	Bra018296.1-P	AT3G51920.1	17360592
AT1G65300.1	Bra033467.1-P	AT3G51920.1	17360592
AT1G65300.1	Bra011938.1-P	AT4G36590.1	15805477
AT1G65300.1	Bra035685.1-P	AT4G36590.1	15805477
AT1G65300.1	Bra002480.1-P	AT5G60440.1	15805477
AT1G65300.1	Bra020242.1-P	AT5G60440.1	15805477
AT1G65300.1	Bra020245.1-P	AT5G60440.1	15805477
AT1G65300.1	Bra020246.1-P	AT5G60440.1	15805477
AT1G65300.1	Bra020247.1-P	AT5G60440.1	15805477
AT1G65330.1	Bra011938.1-P	AT1G01530.1	15805477
AT1G65330.1	Bra035685.1-P	AT1G01530.1	15805477
AT1G65330.1	Bra009436.1-P	AT1G46408.1	15805477
AT1G65330.1	Bra007829.1-P	AT2G24840.1	18713950
AT1G65330.1	Bra032057.1-P	AT2G24840.1	18713950
AT1G65330.1	Bra011938.1-P	AT4G36590.1	15805477
AT1G65330.1	Bra035685.1-P	AT4G36590.1	15805477
AT1G65330.1	Bra009436.1-P	AT5G04640.1	15805477
AT1G65330.1	Bra020600.1-P	AT5G27130.1	15805477
AT1G65330.1	Bra002480.1-P	AT5G60440.1	15805477
AT1G65330.1	Bra020242.1-P	AT5G60440.1	15805477
AT1G65330.1	Bra020245.1-P	AT5G60440.1	15805477
AT1G65330.1	Bra020246.1-P	AT5G60440.1	15805477
AT1G65330.1	Bra020247.1-P	AT5G60440.1	15805477
AT5G26650.1	Bra011938.1-P	AT1G01530.1	15805477
AT5G26650.1	Bra035685.1-P	AT1G01530.1	15805477
AT5G26650.1	Bra002480.1-P	AT5G60440.1	15805477
AT5G26650.1	Bra020242.1-P	AT5G60440.1	15805477
AT5G26650.1	Bra020245.1-P	AT5G60440.1	15805477
AT5G26650.1	Bra020246.1-P	AT5G60440.1	15805477
AT5G26650.1	Bra020247.1-P	AT5G60440.1	15805477
AT5G27960.1	Bra009911.1-P	AT1G31630.1	15805477
AT5G27960.1	Bra020524.1-P	AT1G31630.1	15805477
AT5G27960.1	Bra020525.1-P	AT1G31630.1	15805477
AT5G27960.1	Bra020550.1-P	AT1G31630.1	15805477
AT5G27960.1	Bra020552.1-P	AT1G31630.1	15805477
AT5G27960.1	Bra009911.1-P	AT1G31640.1	15805477
AT5G27960.1	Bra020524.1-P	AT1G31640.1	15805477
AT5G27960.1	Bra020525.1-P	AT1G31640.1	15805477
AT5G27960.1	Bra020550.1-P	AT1G31640.1	15805477
AT5G27960.1	Bra020552.1-P	AT1G31640.1	15805477
AT5G27960.1	Bra009436.1-P	AT1G46408.1	15805477
AT5G27960.1	Bra020600.1-P	AT1G48150.1	15805477
AT5G27960.1	Bra015643.1-P	AT1G77980.1	15805477
AT5G27960.1	Bra011938.1-P	AT4G36590.1	15805477
AT5G27960.1	Bra035685.1-P	AT4G36590.1	15805477
AT5G27960.1	Bra002480.1-P	AT5G60440.1	15805477
AT5G27960.1	Bra020242.1-P	AT5G60440.1	15805477
AT5G27960.1	Bra020245.1-P	AT5G60440.1	15805477
AT5G27960.1	Bra020246.1-P	AT5G60440.1	15805477
AT5G27960.1	Bra020247.1-P	AT5G60440.1	15805477

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05514	Canola	nucleus	100.0	100.0
Bra020525.1-P	Field mustard	nucleus	81.94	74.68
Bra020550.1-P	Field mustard	nucleus	64.44	61.05
Bra020552.1-P	Field mustard	nucleus	57.22	60.41
Bra009911.1-P	Field mustard	mitochondrion, nucleus	39.72	39.29
AT5G26650.1	Thale cress	nucleus	32.22	31.69
AT5G27960.1	Thale cress	nucleus	27.78	31.25
AT5G26580.1	Thale cress	nucleus	28.33	29.57
AT1G65300.1	Thale cress	nucleus	21.11	27.34
AT1G65330.1	Thale cress	nucleus	20.56	26.52
KXG28893	Sorghum	nucleus	12.22	26.19
AT5G35120.1	Thale cress	cytosol	7.5	25.23
Bra005166.1-P	Field mustard	mitochondrion, nucleus	8.61	24.8
Bra020555.1-P	Field mustard	nucleus	14.72	24.54
AT1G31630.1	Thale cress	mitochondrion	23.06	24.48
KXG28892	Sorghum	nucleus	12.22	23.78
AT1G31640.1	Thale cress	mitochondrion	30.56	23.71
OQU83806	Sorghum	nucleus	11.11	22.86
AT1G59930.1	Thale cress	cytosol	8.33	22.73
Bra009913.1-P	Field mustard	nucleus	12.78	22.66
PGSC0003DMT400003073	Potato	cytosol	6.67	22.22
TraesCS3D01G138400.1	Wheat	cytosol	11.67	22.11
TraesCS3B01G155200.1	Wheat	cytosol	11.94	22.05
EES10067	Sorghum	mitochondrion	12.5	21.84
TraesCS3A01G137500.1	Wheat	cytosol	11.67	21.11
HORVU7Hr1G121600.1	Barley	nucleus	10.56	20.54
Bra041022.1-P	Field mustard	nucleus	18.33	19.76
GSMUA_AchrUn_...	Banana	nucleus	12.5	19.31
TraesCS6A01G020500.1	Wheat	mitochondrion, nucleus	8.33	19.23
KXG28889	Sorghum	nucleus	13.33	19.2
GSMUA_Achr8P06150_001	Banana	nucleus	13.06	19.18
Zm00001d048894_P001	Maize	mitochondrion	13.06	19.03
TraesCS6D01G024000.1	Wheat	mitochondrion, nucleus	9.72	19.02
HORVU6Hr1G003730.1	Barley	nucleus	4.44	18.82
TraesCS7A01G561000.1	Wheat	nucleus	12.22	18.8
TraesCS7D01G548500.1	Wheat	plastid	12.22	18.72
GSMUA_Achr3P08500_001	Banana	nucleus	11.94	18.7
TraesCS6B01G028100.1	Wheat	mitochondrion	9.72	18.62
KXG32310	Sorghum	nucleus	12.5	18.59
GSMUA_Achr3P05500_001	Banana	nucleus	11.39	18.55
GSMUA_Achr3P24560_001	Banana	nucleus	11.94	18.53
TraesCS7D01G550500.1	Wheat	nucleus	9.44	18.38
TraesCS7B01G485400.1	Wheat	nucleus	11.94	18.38
TraesCS7A01G559500.1	Wheat	nucleus	9.72	18.32
TraesCS6B01G027900.1	Wheat	nucleus	11.39	18.06
TraesCS6D01G024300.1	Wheat	mitochondrion	11.39	18.06
HORVU2Hr1G022060.1	Barley	nucleus, plastid	10.28	18.05
TraesCS6B01G028300.1	Wheat	mitochondrion	10.56	18.01
Bra029469.1-P	Field mustard	nucleus	15.0	17.76
TraesCS7B01G484600.1	Wheat	nucleus	8.06	17.68
TraesCS6D01G023800.1	Wheat	mitochondrion	11.11	17.62
Bra018490.1-P	Field mustard	nucleus	14.17	17.59
TraesCS6B01G391600.1	Wheat	nucleus	11.94	17.55
TraesCS6B01G391700.1	Wheat	nucleus	11.94	17.55
Bra039404.1-P	Field mustard	nucleus	14.72	17.55
TraesCS6A01G020900.1	Wheat	mitochondrion	10.28	17.54
TraesCS7B01G484000.1	Wheat	nucleus	8.89	17.3
Bra012335.1-P	Field mustard	mitochondrion	7.78	17.28
KXG28888	Sorghum	nucleus	12.22	17.25
KXG28890	Sorghum	mitochondrion	12.22	17.25
TraesCS6A01G022700.1	Wheat	mitochondrion	10.83	17.18
TraesCS3B01G159600.1	Wheat	nucleus	11.94	17.13
GSMUA_Achr2P18410_001	Banana	nucleus	1.94	17.07
Bra035448.1-P	Field mustard	nucleus	12.5	17.05
HORVU6Hr1G085540.1	Barley	mitochondrion	10.83	17.03
OQU83804	Sorghum	mitochondrion	11.11	17.02
TraesCS6D01G341700.1	Wheat	nucleus	11.39	17.01
TraesCS6D01G342000.1	Wheat	nucleus	11.39	17.01
TraesCS6A01G358900.1	Wheat	nucleus	11.11	16.95
GSMUA_Achr2P18400_001	Banana	nucleus	10.83	16.81
Bra035449.1-P	Field mustard	nucleus	12.22	16.67
EES06917	Sorghum	mitochondrion, nucleus	11.94	16.6
Zm00001d013792_P001	Maize	mitochondrion, nucleus	12.78	16.55
Os03t0582400-01	Rice	nucleus	11.39	16.47
Zm00001d016791_P001	Maize	mitochondrion	12.78	16.03
TraesCS3A01G312600.1	Wheat	nucleus	11.11	15.94
Bra024521.1-P	Field mustard	mitochondrion	6.94	15.43
TraesCS6A01G359700.1	Wheat	nucleus	9.72	15.42
TraesCS6A01G359100.1	Wheat	mitochondrion	11.11	15.33
TraesCS6D01G341800.1	Wheat	mitochondrion, nucleus	10.56	15.32
TraesCS7D01G551000.1	Wheat	nucleus	10.0	15.25
TraesCS2B01G171700.1	Wheat	mitochondrion	8.06	15.18
TraesCS6B01G391800.1	Wheat	mitochondrion	10.83	14.94
TraesCS6D01G342100.1	Wheat	mitochondrion	10.83	14.94
KXG38099	Sorghum	plastid	12.78	14.6
TraesCS7D01G550600.1	Wheat	nucleus	9.72	14.52
TraesCS7B01G484100.1	Wheat	mitochondrion, nucleus	9.44	14.11
TraesCS7B01G484500.1	Wheat	nucleus	9.44	14.11
EER91288	Sorghum	mitochondrion, nucleus	12.22	14.01
HORVU6Hr1G085570.1	Barley	mitochondrion, nucleus	10.0	13.85
TraesCS2D01G128000.1	Wheat	nucleus	8.06	13.68
TraesCS2D01G150900.1	Wheat	mitochondrion	11.39	13.36
TraesCS7A01G551000.1	Wheat	nucleus	11.39	13.1
Bra040248.1-P	Field mustard	nucleus	15.0	13.08
TraesCS7D01G536700.1	Wheat	nucleus	11.11	12.78
TraesCS6D01G342700.1	Wheat	nucleus	10.28	11.97
TraesCS2B01G146100.1	Wheat	nucleus	11.94	11.85
TraesCS6B01G392600.1	Wheat	nucleus	10.0	11.61
TraesCS2A01G146400.1	Wheat	mitochondrion	11.39	11.52
TraesCS7B01G299400.1	Wheat	nucleus	10.0	11.15
TraesCS7D01G393000.1	Wheat	nucleus	10.0	11.15
TraesCS7A01G398800.1	Wheat	nucleus	9.72	10.87
HORVU6Hr1G085670.1	Barley	nucleus	9.44	10.24
PGSC0003DMT400089615	Potato	cytosol	5.28	7.98

Protein Annotations

EnsemblPlants:Bra020524.1	EnsemblPlants:Bra020524.1-P	EnsemblPlantsGene:Bra020524	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	PANTHER:PTHR11945	PANTHER:PTHR11945:SF355	PFAM:PF00319	SEG:seg	SUPFAM:SSF55455
UniParc:UPI0002546E6A	UniProt:M4DVI0	MapMan:15.5.14	:	:	:

Description

AT1G65330 (E=8e-020) PHE1, AGL37 | PHE1 (PHERES1); DNA binding / transcription factor

Coordinates

chrA02:+:24793567..24794649

Molecular Weight (calculated)

40866.5 Da

IEP (calculated)

4.860

GRAVY (calculated)

-0.781

Length

360 amino acids

Sequence
(BLAST)

001: MKKAKELSTL CGVKVCAVIK SCDNTEPEFW PSREGAEAVH LEFTNAVQRQ GFSKIHNHES YLSERIQKDG EKARRLHAEN REIELREVMF DLLKGKTLMP
101: HQYGDPSFMR ELNLFIGGYA NRVTYRTQFL EGSVQHVPPN VGGADAPGPV VGDVNPFVVG TEGSVINPTE AYDHMRQYDG MDMSVNDQAP DHVHHQNMNH
201: QEPFQYQCPT NFYDQTQPMF YGSSQGMNTN HHQEPIEYQT PNVYDQIQPM FTGSSQGMNM HYQEPFQYQP PGNLYDQTQP MFYGSNKDMY TGLNYDQGQS
301: SNQYLNQQMS DVQDLASVAS MDQQLPVTSQ MPSTITTTTA AADLYGHSIN NGWPTRFDLD

Best Arabidopsis Sequence Match ( AT5G26650.1 )
(BLAST)

001: MKKVKLSLIA NERSRKTSFI KRKDGIFKKL HELSTLCGVQ ACALIYSPFI PVPESWPSRE GAKKVASRFL EMPPTARTKK MMDQETYLME RITKAKEQLK
101: NLAAENRELQ VRRFMFDCVE GKMSQYHYDA KDLQDLQSCI NLYLDQLNGR IESIKENGES LLSSVSPFPT RIGVDEIGDE SFSDSPIHAT TGVVDTLNAT
201: NPHVLTGDMT PFLDADATAV TASSRFFDHI PYENMNMSQN LHEPFQHLVP TNVCDFFQNQ NMNQVQYQAP NNLFNQIQRE FYNINLNLNL NLNSNQYLNQ
301: QQSFMNPMVE QHMNHVGGRE SIPFVDGNCY NYHQLPSNQL PAVDHASTSY MPSTTGVYDP YINNNL

Arabidopsis Description

AGL36Agamous-like MADS-box protein AGL36 [Source:UniProtKB/Swiss-Prot;Acc:Q7XJK6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.