Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G65300.1 | Thale cress | nucleus | 77.42 | 77.7 |
| GSMUA_Achr2P18410_001 | Banana | nucleus | 7.53 | 51.22 |
| AT5G35120.1 | Thale cress | cytosol | 19.0 | 49.53 |
| AT1G59930.1 | Thale cress | cytosol | 23.3 | 49.24 |
| CDY71896 | Canola | nucleus | 26.16 | 42.44 |
| AT5G26630.1 | Thale cress | nucleus | 32.26 | 41.28 |
| AT5G27810.1 | Thale cress | cytosol, nucleus, plastid | 17.56 | 41.18 |
| AT1G31630.1 | Thale cress | mitochondrion | 41.58 | 34.22 |
| AT5G27960.1 | Thale cress | nucleus | 38.35 | 33.44 |
| AT5G26650.1 | Thale cress | nucleus | 40.14 | 30.6 |
| CDX80577 | Canola | mitochondrion, nucleus | 32.62 | 30.23 |
| HORVU6Hr1G003730.1 | Barley | nucleus | 8.96 | 29.41 |
| CDX88231 | Canola | nucleus | 29.03 | 29.35 |
| AT3G05860.1 | Thale cress | nucleus | 27.24 | 29.23 |
| TraesCS6A01G020500.1 | Wheat | mitochondrion, nucleus | 16.13 | 28.85 |
| AT5G26580.1 | Thale cress | nucleus | 35.48 | 28.7 |
| GSMUA_Achr3P05500_001 | Banana | nucleus | 22.58 | 28.51 |
| KXG28892 | Sorghum | nucleus | 18.64 | 28.11 |
| CDY71564 | Canola | nucleus | 34.05 | 28.02 |
| GSMUA_Achr8P06150_001 | Banana | nucleus | 24.37 | 27.76 |
| OQU83806 | Sorghum | nucleus | 17.2 | 27.43 |
| Bra020552.1-P | Field mustard | nucleus | 33.33 | 27.27 |
| HORVU7Hr1G121600.1 | Barley | nucleus | 17.92 | 27.03 |
| AT1G22590.2 | Thale cress | mitochondrion, nucleus | 15.77 | 26.99 |
| TraesCS3D01G138400.1 | Wheat | cytosol | 18.28 | 26.84 |
| TraesCS3B01G155200.1 | Wheat | cytosol | 18.64 | 26.67 |
| Bra009911.1-P | Field mustard | mitochondrion, nucleus | 34.77 | 26.65 |
| AT5G48670.1 | Thale cress | nucleus | 30.47 | 26.48 |
| TraesCS7D01G548500.1 | Wheat | plastid | 22.22 | 26.38 |
| GSMUA_Achr3P24560_001 | Banana | nucleus | 21.86 | 26.29 |
| KXG28893 | Sorghum | nucleus | 15.77 | 26.19 |
| GSMUA_Achr3P08500_001 | Banana | nucleus | 21.51 | 26.09 |
| TraesCS7B01G485400.1 | Wheat | nucleus | 21.86 | 26.07 |
| CDY70782 | Canola | nucleus | 30.11 | 26.01 |
| PGSC0003DMT400003073 | Potato | cytosol | 10.04 | 25.93 |
| EES10067 | Sorghum | mitochondrion | 19.0 | 25.73 |
| AT1G31640.1 | Thale cress | mitochondrion | 42.65 | 25.65 |
| TraesCS3A01G137500.1 | Wheat | cytosol | 18.28 | 25.63 |
| TraesCS7B01G484600.1 | Wheat | nucleus | 15.05 | 25.61 |
| TraesCS7D01G550500.1 | Wheat | nucleus | 16.85 | 25.41 |
| Os03t0582400-01 | Rice | nucleus | 22.58 | 25.3 |
| TraesCS7A01G561000.1 | Wheat | nucleus | 21.15 | 25.21 |
| Bra020550.1-P | Field mustard | nucleus | 34.05 | 25.0 |
| GSMUA_Achr2P18400_001 | Banana | nucleus | 20.79 | 25.0 |
| TraesCS6D01G024000.1 | Wheat | mitochondrion, nucleus | 16.49 | 25.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.79 | 24.89 |
| TraesCS6B01G028100.1 | Wheat | mitochondrion | 16.49 | 24.47 |
| EES06917 | Sorghum | mitochondrion, nucleus | 22.58 | 24.32 |
| TraesCS7B01G484000.1 | Wheat | nucleus | 16.13 | 24.32 |
| CDY67043 | Canola | nucleus | 34.05 | 24.3 |
| Zm00001d013792_P001 | Maize | mitochondrion, nucleus | 24.01 | 24.1 |
| TraesCS6B01G391600.1 | Wheat | nucleus | 21.15 | 24.08 |
| TraesCS6B01G391700.1 | Wheat | nucleus | 21.15 | 24.08 |
| CDY05515 | Canola | nucleus | 32.26 | 23.87 |
| CDY05333 | Canola | nucleus | 31.9 | 23.61 |
| HORVU6Hr1G085540.1 | Barley | mitochondrion | 19.35 | 23.58 |
| TraesCS2B01G171700.1 | Wheat | mitochondrion | 16.13 | 23.56 |
| TraesCS7A01G559500.1 | Wheat | nucleus | 16.13 | 23.56 |
| Zm00001d048894_P001 | Maize | mitochondrion | 20.79 | 23.48 |
| KXG28889 | Sorghum | nucleus | 20.79 | 23.2 |
| TraesCS3B01G159600.1 | Wheat | nucleus | 20.79 | 23.11 |
| Bra020525.1-P | Field mustard | nucleus | 32.62 | 23.04 |
| TraesCS6A01G020900.1 | Wheat | mitochondrion | 17.2 | 22.75 |
| TraesCS3A01G312600.1 | Wheat | nucleus | 20.43 | 22.71 |
| Zm00001d016791_P001 | Maize | mitochondrion | 23.3 | 22.65 |
| HORVU2Hr1G022060.1 | Barley | nucleus, plastid | 16.49 | 22.44 |
| TraesCS6D01G341700.1 | Wheat | nucleus | 19.35 | 22.41 |
| TraesCS6D01G342000.1 | Wheat | nucleus | 19.35 | 22.41 |
| TraesCS6B01G028300.1 | Wheat | mitochondrion | 16.85 | 22.27 |
| OQU83804 | Sorghum | mitochondrion | 18.64 | 22.13 |
| TraesCS6B01G027900.1 | Wheat | nucleus | 17.92 | 22.03 |
| KXG28890 | Sorghum | mitochondrion | 20.07 | 21.96 |
| TraesCS6A01G358900.1 | Wheat | nucleus | 18.28 | 21.61 |
| TraesCS6D01G023800.1 | Wheat | mitochondrion | 17.56 | 21.59 |
| TraesCS6B01G391800.1 | Wheat | mitochondrion | 20.07 | 21.46 |
| TraesCS6D01G341800.1 | Wheat | mitochondrion, nucleus | 19.0 | 21.37 |
| TraesCS6A01G359700.1 | Wheat | nucleus | 17.2 | 21.15 |
| KXG32310 | Sorghum | nucleus | 18.28 | 21.07 |
| KXG28888 | Sorghum | nucleus | 19.0 | 20.78 |
| HORVU6Hr1G085570.1 | Barley | mitochondrion, nucleus | 19.35 | 20.77 |
| TraesCS7D01G551000.1 | Wheat | nucleus | 17.56 | 20.76 |
| TraesCS6D01G024300.1 | Wheat | mitochondrion | 16.85 | 20.7 |
| TraesCS6A01G359100.1 | Wheat | mitochondrion | 19.35 | 20.69 |
| TraesCS6D01G342100.1 | Wheat | mitochondrion | 19.35 | 20.69 |
| KXG38099 | Sorghum | plastid | 23.3 | 20.63 |
| Bra020524.1-P | Field mustard | nucleus | 26.52 | 20.56 |
| CDY05514 | Canola | nucleus | 26.52 | 20.56 |
| TraesCS6A01G022700.1 | Wheat | mitochondrion | 16.49 | 20.26 |
| TraesCS7D01G550600.1 | Wheat | nucleus | 17.2 | 19.92 |
| AT2G28700.1 | Thale cress | nucleus | 23.3 | 19.76 |
| TraesCS7B01G484100.1 | Wheat | mitochondrion, nucleus | 16.49 | 19.09 |
| TraesCS7B01G484500.1 | Wheat | nucleus | 16.49 | 19.09 |
| EER91288 | Sorghum | mitochondrion, nucleus | 20.43 | 18.15 |
| TraesCS2D01G128000.1 | Wheat | nucleus | 13.62 | 17.92 |
| TraesCS7D01G536700.1 | Wheat | nucleus | 17.92 | 15.97 |
| TraesCS6D01G342700.1 | Wheat | nucleus | 17.56 | 15.86 |
| TraesCS7A01G551000.1 | Wheat | nucleus | 17.56 | 15.65 |
| TraesCS6B01G392600.1 | Wheat | nucleus | 16.49 | 14.84 |
| TraesCS2D01G150900.1 | Wheat | mitochondrion | 14.34 | 13.03 |
| TraesCS7B01G299400.1 | Wheat | nucleus | 15.05 | 13.0 |
| TraesCS7D01G393000.1 | Wheat | nucleus | 15.05 | 13.0 |
| TraesCS7A01G398800.1 | Wheat | nucleus | 14.7 | 12.73 |
| TraesCS2B01G146100.1 | Wheat | nucleus | 16.49 | 12.67 |
| HORVU6Hr1G085670.1 | Barley | nucleus | 15.05 | 12.65 |
| TraesCS2A01G146400.1 | Wheat | mitochondrion | 14.7 | 11.52 |
| PGSC0003DMT400089615 | Potato | cytosol | 4.66 | 5.46 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:842841 | UniProt:A0A178W2S5 | ProteinID:AAC27144.1 | ProteinID:AAO43311.1 |
| ProteinID:AAO43312.1 | ProteinID:AAO43313.1 | ProteinID:AAO43314.1 | ProteinID:AAO43315.1 | ProteinID:AAO43316.1 | ProteinID:AAO43317.1 |
| ProteinID:AAO43318.1 | ProteinID:AAO43319.1 | ProteinID:AEE34359.1 | ArrayExpress:AT1G65330 | EnsemblPlantsGene:AT1G65330 | RefSeq:AT1G65330 |
| TAIR:AT1G65330 | RefSeq:AT1G65330-TAIR-G | EnsemblPlants:AT1G65330.1 | TAIR:AT1G65330.1 | ncoils:Coil | GO:GO:0000003 |
| GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | GO:GO:0090406 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like | RefSeq:NP_176712.1 |
| UniProt:O80805 | ProteinID:OAP12384.1 | PFAM:PF00319 | Symbol:PHE1 | PO:PO:0000423 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0006334 | PO:PO:0009009 | PO:PO:0009089 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF355 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI00000AB8C8 | SEG:seg | : | : | : | : |
Description
PHE1MADS-box transcription factor PHERES 1 [Source:UniProtKB/Swiss-Prot;Acc:O80805]
Coordinates
chr1:-:24266257..24267336
Molecular Weight (calculated)
31955.3 Da
IEP (calculated)
5.095
GRAVY (calculated)
-0.557
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGKMKLSFI ENDSVRKTTF TKRKKGMLKK FNELVTLCGV DACAVIRSPY NSIQEPWPSR EGVEEVMSKF MEFSVLDRTK KMVDQETFLR QRIAKETERL
101: QKLRDENRNS QIRDLMFGCL KGEVDVSHLH GRDLLDLNVF LNKYLNGVIR RVEILKENGE SSSSVPPPIG VAPTVVDASV PIGFDGRMIQ DQNQNQQEPV
201: QFQYQALYDF YDQIPKKLHD FNMKMNIDPN QSMNLDLNDG EDEGIPCMDN NNYHPEIDCL ATVTTAPTDV CAPNIINDL
101: QKLRDENRNS QIRDLMFGCL KGEVDVSHLH GRDLLDLNVF LNKYLNGVIR RVEILKENGE SSSSVPPPIG VAPTVVDASV PIGFDGRMIQ DQNQNQQEPV
201: QFQYQALYDF YDQIPKKLHD FNMKMNIDPN QSMNLDLNDG EDEGIPCMDN NNYHPEIDCL ATVTTAPTDV CAPNIINDL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.