Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32912 | Soybean | nucleus | 96.53 | 96.53 |
| KRH32909 | Soybean | nucleus | 96.53 | 96.53 |
| KRH32901 | Soybean | nucleus | 95.95 | 95.95 |
| KRG88448 | Soybean | nucleus | 94.8 | 94.8 |
| KRH32946 | Soybean | nucleus | 94.8 | 94.8 |
| KRH32904 | Soybean | nucleus | 94.8 | 94.8 |
| KRH32900 | Soybean | nucleus | 94.8 | 94.8 |
| KRH32910 | Soybean | nucleus | 97.11 | 94.38 |
| KRH32916 | Soybean | nucleus | 93.64 | 93.64 |
| KRH32917 | Soybean | nucleus | 94.8 | 92.13 |
| KRH32908 | Soybean | nucleus | 45.09 | 86.67 |
| KRH72042 | Soybean | extracellular | 36.99 | 62.14 |
| KRH71935 | Soybean | nucleus | 63.01 | 61.58 |
| KRH72149 | Soybean | mitochondrion | 56.07 | 57.4 |
| Solyc04g025050.1.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 16.76 | 51.79 |
| KRH22644 | Soybean | nucleus | 41.04 | 51.08 |
| VIT_01s0010g01500.t01 | Wine grape | nucleus | 30.06 | 50.49 |
| KRH32873 | Soybean | nucleus | 60.12 | 47.93 |
| KRH33030 | Soybean | nucleus | 30.64 | 46.9 |
| CDY71457 | Canola | nucleus | 27.75 | 38.71 |
| CDY69485 | Canola | nucleus | 27.17 | 37.9 |
| KRH72146 | Soybean | nucleus | 39.31 | 35.79 |
| VIT_03s0088g00600.t01 | Wine grape | nucleus | 43.35 | 35.05 |
| VIT_03s0088g00550.t01 | Wine grape | nucleus | 42.77 | 34.74 |
| PGSC0003DMT400013136 | Potato | nucleus | 38.15 | 33.5 |
| KRG91148 | Soybean | nucleus | 46.24 | 33.06 |
| VIT_03s0088g00510.t01 | Wine grape | nucleus | 42.77 | 33.04 |
| KRH35628 | Soybean | nucleus | 46.82 | 32.79 |
| KRH28025 | Soybean | nucleus | 31.79 | 32.74 |
| KRG91147 | Soybean | nucleus | 45.09 | 32.64 |
| KRH41505 | Soybean | cytosol, nucleus, plastid | 29.48 | 31.68 |
| KRH35626 | Soybean | nucleus | 41.04 | 31.42 |
| KRH02077 | Soybean | nucleus | 32.37 | 31.11 |
| KRG91150 | Soybean | nucleus | 40.46 | 30.97 |
| KRG91151 | Soybean | nucleus | 33.53 | 29.0 |
| KRH60217 | Soybean | nucleus | 29.48 | 28.81 |
| KRH35627 | Soybean | mitochondrion | 40.46 | 28.34 |
| KRG91149 | Soybean | mitochondrion | 39.31 | 28.1 |
| KRH45604 | Soybean | nucleus | 30.64 | 28.04 |
| KRG99424 | Soybean | nucleus | 29.48 | 28.02 |
| CDX95426 | Canola | nucleus | 43.35 | 27.17 |
| CDY42198 | Canola | nucleus | 43.35 | 27.17 |
| KRH41503 | Soybean | nucleus | 24.28 | 26.25 |
| CDY24623 | Canola | nucleus | 42.77 | 26.15 |
| Bra022434.1-P | Field mustard | nucleus | 42.2 | 25.8 |
| Bra038225.1-P | Field mustard | nucleus | 38.73 | 25.67 |
| CDY46165 | Canola | nucleus | 41.04 | 25.09 |
| KRH60216 | Soybean | nucleus | 26.59 | 24.86 |
| CDY04574 | Canola | nucleus | 34.1 | 24.79 |
| Bra011938.1-P | Field mustard | nucleus | 34.1 | 24.79 |
| CDY15761 | Canola | nucleus | 31.79 | 24.66 |
| KRH35629 | Soybean | nucleus | 30.06 | 24.64 |
| AT5G60440.1 | Thale cress | nucleus | 41.62 | 24.08 |
| CDY31718 | Canola | nucleus | 32.95 | 23.85 |
| AT4G36590.1 | Thale cress | nucleus | 34.1 | 23.79 |
| CDY09199 | Canola | nucleus | 33.53 | 23.39 |
| Bra002480.1-P | Field mustard | nucleus | 37.57 | 23.3 |
| AT1G65360.1 | Thale cress | nucleus | 30.06 | 23.01 |
| Bra020242.1-P | Field mustard | nucleus | 32.95 | 22.98 |
| CDY31547 | Canola | nucleus | 36.99 | 22.94 |
| CDY09204 | Canola | nucleus | 32.95 | 22.89 |
| CDY28567 | Canola | mitochondrion, nucleus | 32.37 | 22.58 |
| CDY61930 | Canola | nucleus | 36.42 | 22.58 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 31.21 | 22.13 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 31.21 | 21.95 |
| CDY09205 | Canola | nucleus | 35.26 | 21.71 |
| Bra020247.1-P | Field mustard | cytosol | 32.37 | 20.82 |
| AT1G01530.1 | Thale cress | nucleus | 28.9 | 20.24 |
| KRH06269 | Soybean | nucleus | 26.59 | 18.11 |
| KRH47706 | Soybean | nucleus | 26.59 | 18.04 |
| Bra035685.1-P | Field mustard | nucleus | 28.9 | 17.06 |
| KRH47701 | Soybean | nucleus | 27.17 | 16.55 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 32.37 | 16.14 |
| KRH47704 | Soybean | nucleus | 26.59 | 16.03 |
| CDY51695 | Canola | cytosol | 13.87 | 12.24 |
| Bra022446.1-P | Field mustard | cytosol | 13.87 | 12.24 |
| Bra020246.1-P | Field mustard | cytosol | 9.83 | 10.0 |
| Bra020245.1-P | Field mustard | nucleus | 7.51 | 9.29 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A0R0HYT5 | EMBL:ACUP02006202 | ncoils:Coil | EnsemblPlantsGene:GLYMA_10G086200 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | EnsemblPlants:KRH32915 | ProteinID:KRH32915 | ProteinID:KRH32915.1 |
| InterPro:MADS_MEF2-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0006EDC380 | : |
Description
hypothetical protein
Coordinates
chr10:-:10914977..10915498
Molecular Weight (calculated)
19851.1 Da
IEP (calculated)
10.216
GRAVY (calculated)
-0.600
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDLNGVAKK TKGQQKIEMK KMRNESNLWV TFSKRRTGVF KKANELATLC GVDVAVIMFS PGNRVFSFGS PSVDSVVQRY KTQGPPPLLT LDLNKVHSTV
101: YEVELHTHLH CLSNQIAIEK KRTKDLNHLA KAAEDQFWWA RPIESMTDSQ LDKYKKMLEE FKRQLKEKCG NLN
101: YEVELHTHLH CLSNQIAIEK KRTKDLNHLA KAAEDQFWWA RPIESMTDSQ LDKYKKMLEE FKRQLKEKCG NLN
001: MSSTKQAKGR KTKGKQKIEM KKVENYGDRM ITFSKRKTGI FKKMNELVAM CDVEVAFLIF SQPKKPYTFA HPSMKKVADR LKNPSRQEPL ERDDTRPLVE
101: AYKKRRLHDL VKKMEALEEE LAMDLEKLKL LKESRNEKKL DKMWWNFPSE GLSAKELQQR YQAMLELRDN LCDNMAHLRL GKDCGGSSSV RVGRRVSGGV
201: RLFDREA
101: AYKKRRLHDL VKKMEALEEE LAMDLEKLKL LKESRNEKKL DKMWWNFPSE GLSAKELQQR YQAMLELRDN LCDNMAHLRL GKDCGGSSSV RVGRRVSGGV
201: RLFDREA
Arabidopsis Description
AGL57AGAMOUS-like 57 [Source:UniProtKB/TrEMBL;Acc:Q9M8W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.