Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038225.1-P | Field mustard | nucleus | 93.84 | 99.23 |
| CDX95426 | Canola | nucleus | 95.65 | 95.65 |
| Solyc04g025050.1.1 | Tomato | golgi, mitochondrion, nucleus, plastid | 14.13 | 69.64 |
| CDY24623 | Canola | nucleus | 69.57 | 67.84 |
| CDY46165 | Canola | nucleus | 68.12 | 66.43 |
| CDY51695 | Canola | cytosol | 42.75 | 60.2 |
| CDY36151 | Canola | nucleus | 18.84 | 59.09 |
| VIT_01s0010g01500.t01 | Wine grape | nucleus | 21.74 | 58.25 |
| KRH22644 | Soybean | nucleus | 25.72 | 51.08 |
| CDY69485 | Canola | nucleus | 22.46 | 50.0 |
| CDY71457 | Canola | nucleus | 22.1 | 49.19 |
| VIT_03s0088g00510.t01 | Wine grape | nucleus | 37.68 | 46.43 |
| VIT_03s0088g00550.t01 | Wine grape | nucleus | 35.14 | 45.54 |
| VIT_03s0088g00600.t01 | Wine grape | nucleus | 35.14 | 45.33 |
| KRH32912 | Soybean | nucleus | 28.26 | 45.09 |
| KRH32901 | Soybean | nucleus | 28.26 | 45.09 |
| PGSC0003DMT400013136 | Potato | nucleus | 31.88 | 44.67 |
| KRH72042 | Soybean | extracellular | 16.67 | 44.66 |
| KRH32910 | Soybean | nucleus | 28.62 | 44.38 |
| KRH32917 | Soybean | nucleus | 28.62 | 44.38 |
| KRH32909 | Soybean | nucleus | 27.54 | 43.93 |
| KRH32946 | Soybean | nucleus | 27.54 | 43.93 |
| KRG88448 | Soybean | nucleus | 27.54 | 43.93 |
| KRH32915 | Soybean | nucleus | 27.17 | 43.35 |
| KRH32904 | Soybean | nucleus | 27.17 | 43.35 |
| KRH32900 | Soybean | nucleus | 27.17 | 43.35 |
| KRH32916 | Soybean | nucleus | 27.17 | 43.35 |
| KRH72149 | Soybean | mitochondrion | 26.09 | 42.6 |
| KRH33030 | Soybean | nucleus | 17.03 | 41.59 |
| KRH71935 | Soybean | nucleus | 26.45 | 41.24 |
| CDY09205 | Canola | nucleus | 41.67 | 40.93 |
| KRG91147 | Soybean | nucleus | 35.14 | 40.59 |
| KRG91148 | Soybean | nucleus | 35.51 | 40.5 |
| CDY09199 | Canola | nucleus | 36.23 | 40.32 |
| CDY61930 | Canola | nucleus | 40.58 | 40.14 |
| CDY31547 | Canola | nucleus | 40.22 | 39.78 |
| CDY28567 | Canola | mitochondrion, nucleus | 35.51 | 39.52 |
| CDX81713 | Canola | nucleus | 23.19 | 39.51 |
| CDY09204 | Canola | nucleus | 35.51 | 39.36 |
| CDY55987 | Canola | nucleus | 23.91 | 39.29 |
| KRH35628 | Soybean | nucleus | 34.78 | 38.87 |
| KRH28025 | Soybean | nucleus | 23.19 | 38.1 |
| KRH32873 | Soybean | nucleus | 29.71 | 37.79 |
| CDY04574 | Canola | nucleus | 31.52 | 36.55 |
| CDY15761 | Canola | nucleus | 28.99 | 35.87 |
| CDY31718 | Canola | nucleus | 30.07 | 34.73 |
| KRG91149 | Soybean | mitochondrion | 30.07 | 34.3 |
| KRH35627 | Soybean | mitochondrion | 30.43 | 34.01 |
| CDY57614 | Canola | nucleus | 21.38 | 32.96 |
| CDX74094 | Canola | nucleus | 21.01 | 32.4 |
| KRH32908 | Soybean | nucleus | 10.14 | 31.11 |
| CDY45604 | Canola | cytosol | 6.52 | 31.03 |
| KRH35629 | Soybean | nucleus | 23.19 | 30.33 |
| KRH72146 | Soybean | nucleus | 20.29 | 29.47 |
| CDY36150 | Canola | cytosol | 6.16 | 29.31 |
| CDX76788 | Canola | cytosol | 10.87 | 26.55 |
| GSMUA_Achr5P01940_001 | Banana | nucleus | 23.19 | 26.23 |
| CDY34751 | Canola | cytosol | 10.51 | 25.66 |
| GSMUA_Achr4P28260_001 | Banana | nucleus | 22.83 | 25.61 |
| CDX99867 | Canola | nucleus | 17.75 | 25.26 |
| CDY26304 | Canola | nucleus | 15.94 | 23.78 |
| CDY21751 | Canola | nucleus | 17.03 | 22.82 |
| CDY50644 | Canola | cytosol, mitochondrion, nucleus | 17.39 | 22.64 |
| CDX68270 | Canola | cytosol, nucleus, plastid | 17.39 | 22.64 |
| CDX72908 | Canola | nucleus | 17.03 | 22.07 |
| CDX81816 | Canola | nucleus | 16.3 | 21.84 |
| GSMUA_Achr5P01990_001 | Banana | nucleus | 25.0 | 19.88 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078HZK3 | UniProt:A0A078HZK3 | EnsemblPlants:CDY42198 | ProteinID:CDY42198 |
| ProteinID:CDY42198.1 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00074410001 | InterPro:IPR002100 | InterPro:IPR036879 |
| InterPro:MADS_MEF2-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0004EF0A0C | SEG:seg |
Description
BnaA01g25970DBnaA01g25970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZK3]
Coordinates
chrLK032518:+:41975..43237
Molecular Weight (calculated)
32151.8 Da
IEP (calculated)
7.877
GRAVY (calculated)
-0.893
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIKNKGRQK IEMVKMKNEN NLQVTFSKRR SGLFKKASEL CTLCGAEIVV IVFSPGRKVF SFGHPNVDVV IDRFLKINPH HPHQNNNLQL NEACLNAVVQ
101: DLNNHLTQVT EQLEEEKKRN EDLKQKRKDD KKSENWWEDP IEGFNLRQLT EFKCGLENFK KTVTTEASKY LQATGHNFYF GSSSNATFGI FDNDGNTNSE
201: LDLFNHRRLV DMNTFSGNHQ NMIIPHHSTI PYGNNVIERF APEHNQNQSQ YCFKQERASE CDRQPDHPPH YRHEYC
101: DLNNHLTQVT EQLEEEKKRN EDLKQKRKDD KKSENWWEDP IEGFNLRQLT EFKCGLENFK KTVTTEASKY LQATGHNFYF GSSSNATFGI FDNDGNTNSE
201: LDLFNHRRLV DMNTFSGNHQ NMIIPHHSTI PYGNNVIERF APEHNQNQSQ YCFKQERASE CDRQPDHPPH YRHEYC
001: MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNSIVQ
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
101: DLNNHLTQVL SQLETEKKKY DELKKIREKT KALGNWWEDP VEELALSQLE GFKGNLENLK KVVTVEASRF FQANVPNFYV GSSSNNAAFG IDDGSHINPD
201: MDLFSQRRMM DINAFNYNQN QIHPNHALPP FGNNAYGINE GFVPEYNVNF RPEYNPNQNQ IQNQNQVQIQ IQNQSFKREN ISEYEHHHGY PPQSRSDYY
Arabidopsis Description
AGL62Agamous-like MADS-box protein AGL62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.