Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- endoplasmic reticulum 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra026764.1-P | Field mustard | nucleus | 96.91 | 93.45 |
CDY55987 | Canola | nucleus | 96.91 | 93.45 |
CDY36151 | Canola | nucleus | 34.57 | 63.64 |
CDY71457 | Canola | nucleus | 29.63 | 38.71 |
CDY69485 | Canola | nucleus | 29.63 | 38.71 |
PGSC0003DMT400094816 | Potato | golgi, nucleus, plastid | 45.68 | 33.48 |
CDY45604 | Canola | cytosol | 11.73 | 32.76 |
PGSC0003DMT400094062 | Potato | nucleus | 40.12 | 31.86 |
KRH35626 | Soybean | nucleus | 44.44 | 31.86 |
VIT_03s0088g00590.t01 | Wine grape | nucleus | 41.98 | 31.78 |
KRG91150 | Soybean | nucleus | 43.83 | 31.42 |
CDY36150 | Canola | cytosol | 11.11 | 31.03 |
VIT_03s0088g00610.t01 | Wine grape | cytosol | 38.89 | 28.77 |
CDX74094 | Canola | nucleus | 31.48 | 28.49 |
CDY57614 | Canola | nucleus | 31.48 | 28.49 |
CDY34751 | Canola | cytosol | 19.14 | 27.43 |
CDY28567 | Canola | mitochondrion, nucleus | 41.36 | 27.02 |
CDY09204 | Canola | nucleus | 41.36 | 26.91 |
CDY09199 | Canola | nucleus | 40.74 | 26.61 |
CDX76788 | Canola | cytosol | 18.52 | 26.55 |
CDY31547 | Canola | nucleus | 43.83 | 25.45 |
CDY46165 | Canola | nucleus | 44.44 | 25.44 |
CDY15761 | Canola | nucleus | 34.57 | 25.11 |
CDY24623 | Canola | nucleus | 43.83 | 25.09 |
CDY31718 | Canola | nucleus | 36.42 | 24.69 |
CDY61930 | Canola | nucleus | 41.98 | 24.37 |
CDY04574 | Canola | nucleus | 35.19 | 23.95 |
CDX95426 | Canola | nucleus | 40.12 | 23.55 |
CDY42198 | Canola | nucleus | 39.51 | 23.19 |
CDY09205 | Canola | nucleus | 39.51 | 22.78 |
CDX99867 | Canola | nucleus | 24.69 | 20.62 |
GSMUA_Achr5P01940_001 | Banana | nucleus | 30.25 | 20.08 |
CDY26304 | Canola | nucleus | 22.84 | 20.0 |
CDX81816 | Canola | nucleus | 24.07 | 18.93 |
CDY21751 | Canola | nucleus | 23.46 | 18.45 |
CDX72908 | Canola | nucleus | 24.07 | 18.31 |
GSMUA_Achr4P28260_001 | Banana | nucleus | 27.78 | 18.29 |
CDX68270 | Canola | cytosol, nucleus, plastid | 22.22 | 16.98 |
CDY50644 | Canola | cytosol, mitochondrion, nucleus | 22.22 | 16.98 |
GSMUA_Achr5P01990_001 | Banana | nucleus | 29.63 | 13.83 |
CDY51695 | Canola | cytosol | 16.05 | 13.27 |
Protein Annotations
MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078D323 | EnsemblPlants:CDX81713 | ProteinID:CDX81713 | ProteinID:CDX81713.1 |
GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00136639001 | InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | PFAM:PF00319 |
PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF185 | SMART:SM00432 | SUPFAM:SSF55455 |
InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0004EE245F | SEG:seg | : | : |
Description
BnaC08g38880D
Coordinates
chrLK031826:+:446690..447178
Molecular Weight (calculated)
18431.2 Da
IEP (calculated)
9.393
GRAVY (calculated)
-0.473
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKIEKESHR QVAFSKRRAG LFKKASELCT LCGVEVAIIV FSPAKKPFSF GHPSVYSVLD RYRNNTSFQQ QSQPMENTAT RSELSLVLSQ VEEEKKKGEK
101: MRKASEMAKW SVDEMSLLQL QEMRYALEEL RNTMVVPPPS YMNPMSTGFS CIYNSSYVHA SS
101: MRKASEMAKW SVDEMSLLQL QEMRYALEEL RNTMVVPPPS YMNPMSTGFS CIYNSSYVHA SS
001: MYVTKYKNKL PTLQVDLIIM PHQTQACIYK QTLSLHQIFQ QRKATKTLHT KKTMMSKKKE SIGRQKIPMV KIKKESHRQV TFSKRRAGLF KKASELCTLC
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
101: GAEIGIIVFS PAKKPFSFGH PSVESVLDRY VSRNNMSLAQ SQQLQGSPAA SCELNMQLTH ILSEVEEEKK KGQAMEEMRK ESVRRSMINW WEKPVEEMNM
201: VQLQEMKYAL EELRKTVVTN MASFNEAKDD VFGFLDNKVT VPPYVNMPSG PSNIYNFANG NGCF
Arabidopsis Description
AGL61Agamous-like MADS-box protein AGL61 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.