Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97510 | Sorghum | nucleus | 91.09 | 92.89 |
| KRH75125 | Soybean | nucleus | 20.54 | 86.89 |
| Os07t0605200-01 | Rice | nucleus | 73.64 | 76.31 |
| TraesCS2A01G174300.3 | Wheat | nucleus | 76.36 | 73.78 |
| TraesCS2B01G200800.1 | Wheat | nucleus | 76.36 | 73.78 |
| TraesCS2D01G181400.3 | Wheat | nucleus | 76.36 | 73.78 |
| CDY19977 | Canola | nucleus | 25.97 | 65.69 |
| Bra004361.1-P | Field mustard | nucleus | 44.19 | 60.32 |
| Bra025411.1-P | Field mustard | nucleus | 41.09 | 60.23 |
| VIT_14s0083g01030.t01 | Wine grape | nucleus | 54.26 | 56.68 |
| VIT_01s0011g00100.t01 | Wine grape | nucleus | 52.71 | 56.43 |
| VIT_17s0000g04990.t01 | Wine grape | nucleus | 51.94 | 55.14 |
| Solyc03g114830.2.1 | Tomato | nucleus | 52.71 | 55.06 |
| CDY34564 | Canola | nucleus | 46.51 | 55.05 |
| KRH54740 | Soybean | nucleus | 51.94 | 54.92 |
| KRH63171 | Soybean | nucleus | 51.94 | 54.92 |
| PGSC0003DMT400063313 | Potato | nucleus | 52.71 | 54.84 |
| CDY36077 | Canola | nucleus | 46.9 | 54.75 |
| KRH07467 | Soybean | nucleus | 49.22 | 53.81 |
| Solyc06g069430.2.1 | Tomato | nucleus | 50.78 | 53.47 |
| PGSC0003DMT400010451 | Potato | nucleus | 51.55 | 53.2 |
| KRH45412 | Soybean | nucleus | 48.45 | 52.97 |
| CDY65811 | Canola | nucleus | 52.33 | 52.73 |
| Bra038326.1-P | Field mustard | nucleus | 52.33 | 52.73 |
| PGSC0003DMT400072888 | Potato | nucleus | 49.61 | 52.46 |
| Solyc05g056620.1.1 | Tomato | nucleus | 49.61 | 52.46 |
| CDY16832 | Canola | nucleus | 48.84 | 52.28 |
| Bra035952.1-P | Field mustard | nucleus | 48.84 | 52.28 |
| AT5G60910.1 | Thale cress | nucleus | 48.84 | 52.07 |
| KRH03173 | Soybean | nucleus | 48.06 | 51.88 |
| CDY42841 | Canola | nucleus | 48.06 | 51.67 |
| Bra029347.1-P | Field mustard | nucleus | 48.06 | 51.67 |
| Solyc02g089210.2.1 | Tomato | nucleus | 50.0 | 51.6 |
| CDX95960 | Canola | nucleus | 51.16 | 51.56 |
| CDY47002 | Canola | nucleus | 48.06 | 51.45 |
| CDY58690 | Canola | nucleus | 48.06 | 51.45 |
| CDY33554 | Canola | nucleus | 50.78 | 51.17 |
| AT1G69120.1 | Thale cress | nucleus | 50.78 | 51.17 |
| KRH70974 | Soybean | nucleus | 48.06 | 51.03 |
| Bra012997.1-P | Field mustard | nucleus | 47.29 | 50.62 |
| CDY02185 | Canola | nucleus | 47.29 | 50.62 |
| KRH56774 | Soybean | nucleus | 47.67 | 50.41 |
| PGSC0003DMT400003485 | Potato | nucleus | 48.06 | 50.2 |
| GSMUA_Achr3P02280_001 | Banana | nucleus | 50.78 | 49.81 |
| Zm00001d018667_P003 | Maize | nucleus | 51.94 | 49.45 |
| Zm00001d003409_P001 | Maize | nucleus | 16.67 | 49.43 |
| Bra011021.1-P | Field mustard | nucleus | 48.45 | 49.21 |
| Zm00001d013259_P002 | Maize | nucleus | 53.1 | 49.1 |
| GSMUA_Achr10P... | Banana | nucleus | 53.88 | 48.77 |
| PGSC0003DMT400068325 | Potato | nucleus | 44.19 | 48.72 |
| CDY00082 | Canola | nucleus | 46.12 | 47.98 |
| AT1G26310.1 | Thale cress | nucleus | 46.9 | 47.45 |
| CDX86353 | Canola | nucleus | 45.74 | 47.39 |
| Bra004007.1-P | Field mustard | nucleus | 49.61 | 47.23 |
| Bra036201.1-P | Field mustard | nucleus | 45.35 | 47.18 |
| KRH45099 | Soybean | nucleus | 45.35 | 47.18 |
| Solyc02g065730.1.1 | Tomato | nucleus | 42.64 | 47.01 |
| CDY04265 | Canola | nucleus | 50.39 | 46.93 |
| KRG93701 | Soybean | nucleus | 44.19 | 46.72 |
| CDY45899 | Canola | nucleus | 44.96 | 46.59 |
| AT3G30260.1 | Thale cress | nucleus | 44.19 | 45.78 |
| CDY07357 | Canola | nucleus | 50.78 | 45.33 |
| KRH18331 | Soybean | nucleus | 42.64 | 45.08 |
| Zm00001d034045_P003 | Maize | nucleus | 50.78 | 45.02 |
| Zm00001d031620_P001 | Maize | nucleus | 44.19 | 44.71 |
| Zm00001d045231_P002 | Maize | nucleus | 38.76 | 44.44 |
| Zm00001d034047_P007 | Maize | nucleus | 40.7 | 43.75 |
| Zm00001d021057_P001 | Maize | nucleus | 41.86 | 43.72 |
| Zm00001d007949_P001 | Maize | nucleus | 51.55 | 43.61 |
| KRH01382 | Soybean | nucleus | 42.64 | 43.48 |
| Zm00001d006094_P001 | Maize | nucleus | 42.25 | 43.43 |
| Zm00001d023736_P001 | Maize | nucleus | 39.53 | 39.69 |
| Zm00001d045227_P001 | Maize | nucleus | 20.54 | 39.26 |
| Zm00001d048082_P001 | Maize | nucleus | 37.98 | 38.89 |
| Zm00001d028217_P001 | Maize | nucleus | 37.21 | 37.21 |
| Zm00001d051465_P002 | Maize | nucleus | 41.47 | 36.52 |
| CDX85287 | Canola | nucleus | 25.97 | 35.83 |
| Zm00001d016957_P003 | Maize | nucleus | 32.95 | 35.42 |
| Zm00001d017932_P002 | Maize | nucleus | 31.01 | 33.9 |
| Zm00001d017614_P003 | Maize | nucleus | 34.88 | 32.49 |
| CDY35780 | Canola | nucleus | 24.81 | 32.49 |
| Zm00001d042591_P002 | Maize | nucleus | 32.17 | 30.97 |
| Zm00001d023955_P003 | Maize | nucleus | 30.62 | 29.81 |
| Zm00001d039434_P001 | Maize | nucleus | 29.46 | 29.01 |
| Zm00001d041781_P001 | Maize | nucleus | 31.4 | 28.22 |
| Zm00001d050897_P002 | Maize | nucleus | 32.17 | 26.27 |
| Zm00001d037737_P001 | Maize | nucleus | 30.62 | 25.82 |
| Zm00001d008882_P001 | Maize | nucleus | 27.91 | 21.88 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:542045 | UniProt:A0A1D6IJ33 | GO:GO:0000977 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 |
| InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | ProteinID:ONM59477.1 | PFAM:PF00319 |
| PFAM:PF01486 | PRINTS:PR00404 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF345 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000844968C |
| EnsemblPlantsGene:Zm00001d022088 | EnsemblPlants:Zm00001d022088_P004 | EnsemblPlants:Zm00001d022088_T004 | SEG:seg | : | : |
Description
MADS-transcription factor 67Agamous-like MADS-box protein AGL8
Coordinates
chr7:+:169844115..169849649
Molecular Weight (calculated)
29285.1 Da
IEP (calculated)
9.962
GRAVY (calculated)
-0.663
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGPVQLRR IENKINRQVT FSKRRNGLLK KAHEISVLCD AEVALIVFST KGKLYEYSSH SSMEGILERY QRYSFEERAV LNPSIEDQAN WGDEYVRLKS
101: KLDALQKSQR QLLGEQLSSL TIKELQQLEQ QLDSSLKHIR SRKLYFFLVQ NQLMFDSISA LQKKEKALTD QNGVLQKFME AEKEKNKALM NAQLREQQNG
201: ASTSSPSLSP PIVPDSMPTL NIGPCQHRGA AESESEPSPA PAQANRGNLP PWMLRTVK
101: KLDALQKSQR QLLGEQLSSL TIKELQQLEQ QLDSSLKHIR SRKLYFFLVQ NQLMFDSISA LQKKEKALTD QNGVLQKFME AEKEKNKALM NAQLREQQNG
201: ASTSSPSLSP PIVPDSMPTL NIGPCQHRGA AESESEPSPA PAQANRGNLP PWMLRTVK
001: MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFSS KGKLFEYSTD SCMERILERY DRYLYSDKQL VGRDVSQSEN WVLEHAKLKA
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE
Arabidopsis Description
AGL8Agamous-like MADS-box protein AGL8 [Source:UniProtKB/Swiss-Prot;Acc:Q38876]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.