Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU77603 | Sorghum | nucleus | 85.62 | 89.73 |
| TraesCS1D01G127700.1 | Wheat | nucleus | 59.8 | 68.03 |
| TraesCS1A01G125800.1 | Wheat | nucleus | 59.48 | 67.66 |
| KRH14461 | Soybean | nucleus | 22.88 | 67.31 |
| TraesCS1B01G144800.1 | Wheat | nucleus | 59.15 | 67.29 |
| Os05t0203800-02 | Rice | nucleus | 58.17 | 65.44 |
| GSMUA_Achr10P... | Banana | nucleus | 45.75 | 61.14 |
| VIT_10s0003g02070.t01 | Wine grape | nucleus | 44.12 | 59.73 |
| Zm00001d039434_P001 | Maize | nucleus | 49.35 | 57.63 |
| CDY09267 | Canola | nucleus | 46.08 | 56.63 |
| Bra013364.1-P | Field mustard | nucleus | 46.41 | 56.35 |
| CDX78909 | Canola | nucleus | 46.41 | 56.35 |
| HORVU1Hr1G029220.1 | Barley | nucleus | 59.8 | 56.13 |
| AT4G18960.1 | Thale cress | nucleus | 46.08 | 55.95 |
| KRH21150 | Soybean | nucleus | 44.12 | 55.56 |
| CDX98597 | Canola | nucleus | 45.42 | 55.38 |
| Bra012564.1-P | Field mustard | nucleus | 45.42 | 55.38 |
| PGSC0003DMT400073134 | Potato | nucleus | 44.77 | 55.24 |
| Solyc02g071730.2.1 | Tomato | nucleus | 44.12 | 54.44 |
| KRH42930 | Soybean | nucleus | 42.81 | 53.91 |
| GSMUA_Achr6P14760_001 | Banana | nucleus | 44.12 | 53.15 |
| Zm00001d003409_P001 | Maize | nucleus | 15.03 | 52.87 |
| KRH59043 | Soybean | nucleus | 41.5 | 52.26 |
| KRH73684 | Soybean | nucleus | 41.5 | 51.63 |
| KRH46066 | Soybean | nucleus | 41.5 | 51.42 |
| KRG98899 | Soybean | nucleus | 41.18 | 51.22 |
| CDX79857 | Canola | nucleus | 40.2 | 50.41 |
| Bra004716.1-P | Field mustard | nucleus | 40.2 | 50.41 |
| AT2G42830.2 | Thale cress | nucleus | 40.52 | 50.0 |
| Bra014552.1-P | Field mustard | nucleus | 40.2 | 49.6 |
| Bra007419.1-P | Field mustard | nucleus | 39.54 | 49.39 |
| CDX98330 | Canola | nucleus | 39.87 | 49.19 |
| Solyc07g055920.2.1 | Tomato | nucleus | 42.48 | 48.69 |
| VIT_12s0142g00360.t01 | Wine grape | nucleus | 43.46 | 48.54 |
| PGSC0003DMT400044552 | Potato | nucleus | 39.54 | 47.64 |
| Zm00001d045227_P001 | Maize | nucleus | 20.91 | 47.41 |
| Zm00001d023955_P003 | Maize | nucleus | 40.52 | 46.79 |
| Zm00001d042591_P002 | Maize | nucleus | 40.52 | 46.27 |
| CDY00589 | Canola | nucleus | 41.5 | 46.18 |
| CDY49254 | Canola | nucleus | 40.85 | 45.45 |
| CDX89005 | Canola | nucleus | 40.85 | 45.29 |
| CDX99406 | Canola | nucleus | 46.08 | 45.19 |
| GSMUA_Achr10P... | Banana | nucleus | 46.73 | 44.83 |
| Zm00001d041781_P001 | Maize | nucleus | 41.83 | 44.6 |
| AT3G58780.4 | Thale cress | nucleus | 39.87 | 43.42 |
| Zm00001d008882_P001 | Maize | nucleus | 45.1 | 41.95 |
| Bra003356.1-P | Field mustard | nucleus | 36.93 | 41.39 |
| Zm00001d045231_P002 | Maize | nucleus | 28.43 | 38.67 |
| Zm00001d034047_P007 | Maize | nucleus | 27.78 | 35.42 |
| CDX67765 | Canola | nucleus | 39.87 | 35.06 |
| Zm00001d017932_P002 | Maize | nucleus | 26.8 | 34.75 |
| Zm00001d048082_P001 | Maize | nucleus | 28.1 | 34.13 |
| Zm00001d016957_P003 | Maize | nucleus | 26.14 | 33.33 |
| Zm00001d021057_P001 | Maize | nucleus | 26.8 | 33.2 |
| Zm00001d006094_P001 | Maize | nucleus | 26.8 | 32.67 |
| Zm00001d028217_P001 | Maize | nucleus | 26.8 | 31.78 |
| Zm00001d031620_P001 | Maize | nucleus | 26.14 | 31.37 |
| Zm00001d022088_P004 | Maize | nucleus | 25.82 | 30.62 |
| Zm00001d051465_P002 | Maize | nucleus | 28.76 | 30.03 |
| Zm00001d018667_P003 | Maize | nucleus | 25.82 | 29.15 |
| Zm00001d017614_P003 | Maize | nucleus | 26.14 | 28.88 |
| Zm00001d013259_P002 | Maize | nucleus | 24.84 | 27.24 |
| Zm00001d007949_P001 | Maize | nucleus | 25.82 | 25.9 |
| Zm00001d023736_P001 | Maize | nucleus | 21.57 | 25.68 |
| Zm00001d034045_P003 | Maize | nucleus | 24.18 | 25.43 |
| Zm00001d050897_P002 | Maize | nucleus | 23.53 | 22.78 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A1D6M069 | ProteinID:AQK84708.1 | ncoils:Coil | GO:GO:0000977 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | PFAM:PF00319 |
| PFAM:PF01486 | PRINTS:PR00404 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF332 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000844710C |
| EnsemblPlantsGene:Zm00001d037737 | EnsemblPlants:Zm00001d037737_P001 | EnsemblPlants:Zm00001d037737_T001 | SEG:seg | : | : |
Description
Zea AGAMOUS homolog1ZAG1 protein%3B Zea AGAMOUS-like protein
Coordinates
chr6:+:135893605..135901920
Molecular Weight (calculated)
34454.8 Da
IEP (calculated)
9.641
GRAVY (calculated)
-0.713
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MHIREEEATP STVTGIMSTL TSAGQQKLKE PISPGGGSAS VAGSAAERNN GGRGKGKTEI KRIENTTNRQ VTFCKRRNGL LKKAYELSVL CDAEVALIVF
101: SSRGRLYEYA NNRSLLSLPS SVHLSLLLYC MYSVKGTIER YKKATSDNSS AAGTIAEVTI QHYKQESARL RQQIVNLQNS NRALIGDSIT TMSHKELKHL
201: ETRLDKALGK IRAKKNDVLC SEVEYMQRRE MELQNDNLYL RSRVDENERA QQTANMMGAP STSEYQQHGF TPYDPIRSFL QFNIVQQPQF YSQQEDRKDF
301: NDQGGR
101: SSRGRLYEYA NNRSLLSLPS SVHLSLLLYC MYSVKGTIER YKKATSDNSS AAGTIAEVTI QHYKQESARL RQQIVNLQNS NRALIGDSIT TMSHKELKHL
201: ETRLDKALGK IRAKKNDVLC SEVEYMQRRE MELQNDNLYL RSRVDENERA QQTANMMGAP STSEYQQHGF TPYDPIRSFL QFNIVQQPQF YSQQEDRKDF
301: NDQGGR
001: TAYQSELGGD SSPLRKSGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA LIVFSSRGRL YEYSNNSVKG TIERYKKAIS DNSNTGSVAE
101: INAQYYQQES AKLRQQIISI QNSNRQLMGE TIGSMSPKEL RNLEGRLERS ITRIRSKKNE LLFSEIDYMQ KREVDLHNDN QILRAKIAEN ERNNPSISLM
201: PGGSNYEQLM PPPQTQSQPF DSRNYFQVAA LQPNNHHYSS AGRQDQTALQ LV
101: INAQYYQQES AKLRQQIISI QNSNRQLMGE TIGSMSPKEL RNLEGRLERS ITRIRSKKNE LLFSEIDYMQ KREVDLHNDN QILRAKIAEN ERNNPSISLM
201: PGGSNYEQLM PPPQTQSQPF DSRNYFQVAA LQPNNHHYSS AGRQDQTALQ LV
Arabidopsis Description
AGK-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT4G18960]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.