Factsheet for Bra004716.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79857	Canola	nucleus	100.0	100.0
AT2G42830.2	Thale cress	nucleus	93.44	91.94
Bra014552.1-P	Field mustard	nucleus	83.2	81.85
Bra007419.1-P	Field mustard	nucleus	81.56	81.22
KRH14461	Soybean	nucleus	33.61	78.85
Bra003356.1-P	Field mustard	nucleus	79.51	71.06
KRG98899	Soybean	nucleus	69.26	68.7
KRH46066	Soybean	nucleus	69.26	68.42
KRH73684	Soybean	nucleus	67.62	67.07
GSMUA_Achr10P...	Banana	nucleus	58.2	62.01
GSMUA_Achr5P06590_001	Banana	nucleus	43.44	60.57
VIT_12s0142g00360.t01	Wine grape	nucleus	66.8	59.49
Solyc07g055920.2.1	Tomato	nucleus	64.75	59.18
Bra037895.1-P	Field mustard	nucleus	55.74	59.13
Bra000696.1-P	Field mustard	nucleus	54.51	57.58
PGSC0003DMT400044552	Potato	nucleus	59.84	57.48
Bra013364.1-P	Field mustard	nucleus	59.02	57.14
Bra012564.1-P	Field mustard	nucleus	58.2	56.57
GSMUA_Achr6P14760_001	Banana	nucleus	57.38	55.12
Zm00001d039434_P001	Maize	nucleus	56.15	52.29
EES00105	Sorghum	nucleus	56.56	51.3
TraesCS1D01G262700.1	Wheat	nucleus	52.46	51.2
TraesCS5B01G115100.1	Wheat	nucleus	52.46	50.79
Os01t0201700-02	Rice	nucleus	57.38	50.72
HORVU3Hr1G026650.1	Barley	nucleus	56.15	50.55
HORVU1Hr1G023620.1	Barley	nucleus	52.05	50.4
TraesCS5D01G118200.1	Wheat	nucleus	51.64	50.0
TraesCS3A01G314300.1	Wheat	nucleus	55.74	49.82
Zm00001d023955_P003	Maize	nucleus	54.1	49.81
TraesCS1B01G273300.1	Wheat	nucleus	52.05	49.8
TraesCS3D01G140200.2	Wheat	nucleus	55.74	49.63
TraesCS5A01G117500.1	Wheat	nucleus	51.64	49.61
Os12t0207000-01	Rice	nucleus	53.69	48.52
Zm00001d042591_P002	Maize	nucleus	53.28	48.51
EES15827	Sorghum	nucleus	53.28	48.33
TraesCS1B01G144800.1	Wheat	nucleus	53.28	48.33
Os05t0203800-02	Rice	nucleus	53.69	48.16
TraesCS1A01G125800.1	Wheat	nucleus	52.87	47.96
TraesCS1D01G127700.1	Wheat	nucleus	52.87	47.96
Os01t0886200-01	Rice	nucleus	51.64	47.55
EES01878	Sorghum	nucleus	53.69	47.29
TraesCS1A01G262700.1	Wheat	endoplasmic reticulum	52.05	46.18
Zm00001d041781_P001	Maize	nucleus	54.1	45.99
GSMUA_Achr10P...	Banana	nucleus	57.79	44.2
TraesCS3B01G157500.4	Wheat	nucleus	55.74	43.87
OQU77603	Sorghum	nucleus	49.18	41.1
Zm00001d037737_P001	Maize	nucleus	50.41	40.2
HORVU1Hr1G029220.1	Barley	nucleus	53.28	39.88
Bra025411.1-P	Field mustard	nucleus	28.28	39.2
Zm00001d008882_P001	Maize	nucleus	50.82	37.69
Bra004361.1-P	Field mustard	nucleus	28.28	36.51
Bra008674.1-P	Field mustard	nucleus	37.7	36.51
Bra006322.1-P	Field mustard	nucleus	36.89	36.0
Bra030032.1-P	Field mustard	nucleus	36.89	35.71
Bra010955.1-P	Field mustard	nucleus	35.66	35.66
Bra039170.1-P	Field mustard	nucleus	36.07	35.2
Bra021470.1-P	Field mustard	nucleus	36.07	34.92
Bra012997.1-P	Field mustard	nucleus	34.02	34.44
Bra029347.1-P	Field mustard	nucleus	33.61	34.17
Bra032814.1-P	Field mustard	nucleus	35.25	33.99
Bra000392.1-P	Field mustard	nucleus	35.66	33.85
Bra017638.1-P	Field mustard	nucleus	33.2	33.75
Bra004927.1-P	Field mustard	nucleus	33.2	33.47
Bra011797.1-P	Field mustard	nucleus	31.15	33.33
Bra035952.1-P	Field mustard	nucleus	32.79	33.2
Bra010623.1-P	Field mustard	nucleus	28.28	32.24
Bra039921.1-P	Field mustard	nucleus	29.92	32.16
Bra030222.1-P	Field mustard	nucleus	29.92	32.16
Bra014454.1-P	Field mustard	nucleus	29.92	31.74
Bra025126.1-P	Field mustard	nucleus	33.2	31.52
Bra026543.1-P	Field mustard	nucleus	34.02	30.86
Bra011021.1-P	Field mustard	nucleus	31.97	30.71
Bra038326.1-P	Field mustard	nucleus	31.97	30.47
Bra036201.1-P	Field mustard	nucleus	29.92	29.44
Bra004007.1-P	Field mustard	nucleus	31.97	28.78
Bra017376.1-P	Field mustard	nucleus	27.87	27.98
Bra011509.1-P	Field mustard	nucleus	30.33	25.52
Bra040719.1-P	Field mustard	nucleus	15.16	21.76

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EnsemblPlantsGene:Bra004716	EnsemblPlants:Bra004716.1	EnsemblPlants:Bra004716.1-P	ncoils:Coil
GO:GO:0000977	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0045944	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	UniProt:M4CKI1
InterPro:MADS_MEF2-like	PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404	ScanProsite:PS00350	PFscan:PS50066
PFscan:PS51297	PANTHER:PTHR11945	PANTHER:PTHR11945:SF150	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox
InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI000171F0C7	SEG:seg	:	:

Description

AT2G42830 (E=4e-115) SHP2, AGL5 | SHP2 (SHATTERPROOF 2); protein binding / transcription factor

Coordinates

chrA05:-:1495950..1499136

Molecular Weight (calculated)

28007.2 Da

IEP (calculated)

9.397

GRAVY (calculated)

-0.868

Length

244 amino acids

Sequence
(BLAST)

001: MEGGASDEVA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPSVTEA
101: NTQYYQQESS KLRRQIRDIQ NLNRHILGES LGSLNLKELK NLEGRLEKGI GRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKINERA GMQQQEASVI
201: HQQGTVYESS SHQSEQYNRN YIPVNLLEPN QNSSDQNQPP LQLV

Best Arabidopsis Sequence Match ( AT2G42830.1 )
(BLAST)

001: MEGGASNEVA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPTITEA
101: NTQYYQQEAS KLRRQIRDIQ NLNRHILGES LGSLNFKELK NLESRLEKGI SRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKITERT GLQQQESSVI
201: HQGTVYESGV TSSHQSGQYN RNYIAVNLLE PNQNSSNQDQ PPLQLV

Arabidopsis Description

SHP2K-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT2G42830]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.