Factsheet for Bra039921.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030222.1-P	Field mustard	nucleus	86.78	86.78
AT2G22630.2	Thale cress	nucleus	85.46	85.46
Bra010623.1-P	Field mustard	nucleus	72.25	76.64
Bra011797.1-P	Field mustard	nucleus	75.77	75.44
VIT_00s0211g00180.t01	Wine grape	nucleus	63.88	64.73
Solyc02g091550.1.1	Tomato	nucleus	63.0	60.85
KRH74451	Soybean	nucleus	56.83	58.11
KRH39494	Soybean	nucleus	55.95	57.47
Bra017638.1-P	Field mustard	nucleus	60.35	57.08
Bra040719.1-P	Field mustard	nucleus	32.16	42.94
Bra011509.1-P	Field mustard	nucleus	52.86	41.38
Bra037895.1-P	Field mustard	nucleus	35.68	35.22
Bra004361.1-P	Field mustard	nucleus	28.63	34.39
Bra000696.1-P	Field mustard	nucleus	34.8	34.2
Bra025411.1-P	Field mustard	nucleus	26.43	34.09
Bra012564.1-P	Field mustard	nucleus	34.8	31.47
Bra007419.1-P	Field mustard	nucleus	33.48	31.02
Bra013364.1-P	Field mustard	nucleus	34.36	30.95
Bra006322.1-P	Field mustard	nucleus	33.92	30.8
Bra000392.1-P	Field mustard	nucleus	34.8	30.74
Bra004927.1-P	Field mustard	nucleus	32.6	30.58
Bra008674.1-P	Field mustard	nucleus	33.92	30.56
Bra039170.1-P	Field mustard	nucleus	33.48	30.4
Bra010955.1-P	Field mustard	nucleus	32.6	30.33
Bra021470.1-P	Field mustard	nucleus	33.48	30.16
Bra004716.1-P	Field mustard	nucleus	32.16	29.92
Bra030032.1-P	Field mustard	nucleus	33.04	29.76
Bra014454.1-P	Field mustard	nucleus	29.96	29.57
Bra014552.1-P	Field mustard	nucleus	32.16	29.44
Bra032814.1-P	Field mustard	nucleus	32.16	28.85
Bra029347.1-P	Field mustard	nucleus	29.96	28.33
Bra011021.1-P	Field mustard	nucleus	31.28	27.95
Bra035952.1-P	Field mustard	nucleus	29.52	27.8
Bra012997.1-P	Field mustard	nucleus	29.52	27.8
Bra038326.1-P	Field mustard	nucleus	31.28	27.73
Bra025126.1-P	Field mustard	nucleus	31.28	27.63
Bra026543.1-P	Field mustard	nucleus	32.16	27.14
Bra036201.1-P	Field mustard	nucleus	29.52	27.02
Bra003356.1-P	Field mustard	nucleus	31.72	26.37
Bra017376.1-P	Field mustard	nucleus	27.31	25.51
Bra004007.1-P	Field mustard	nucleus	29.52	24.72

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EnsemblPlantsGene:Bra039921	EnsemblPlants:Bra039921.1	EnsemblPlants:Bra039921.1-P	ncoils:Coil
GO:GO:0000977	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0045944	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	UniProt:M4FFP7
InterPro:MADS_MEF2-like	PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404	ScanProsite:PS00350	PFscan:PS50066
PFscan:PS51297	PANTHER:PTHR11945	PANTHER:PTHR11945:SF263	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox
InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI0002542F55	:	:	:

Description

AT2G22630 (E=1e-104) AGL17 | AGL17 (agamous-like 17); transcription factor

Coordinates

chrA09:-:31857206..31862632

Molecular Weight (calculated)

26385.6 Da

IEP (calculated)

10.012

GRAVY (calculated)

-0.770

Length

227 amino acids

Sequence
(BLAST)

001: MGRGKIVIQR IDDSTSRQVT FSKRRKGLIK KAKELAILCD AEVGLIIFSN TDKLYDFASS SLKSTIERFN KTKMEQQQLL NPASEVKFWQ REATTLRQEL
101: HSLQETHRQL MGQQLNGLSV KELHNIESQL EMSLRGIRMK KEQILTNEIK ELTRKRNLVH HENLELSRKV QRIHQENVEL HKKAYAVSIR NELGTRDIED
201: TADESHAQVR LQLSLPEQSH YETSTNS

Best Arabidopsis Sequence Match ( AT2G22630.1 )
(BLAST)

001: MGRGKIVIQK IDDSTSRQVT FSKRRKGLIK KAKELAILCD AEVCLIIFSN TDKLYDFASS SVKSTIERFN TAKMEEQELM NPASEVKFWQ REAETLRQEL
101: HSLQENYRQL TGVELNGLSV KELQNIESQL EMSLRGIRMK REQILTNEIK ELTRKRNLVH HENLELSRKV QRIHQENVEL YKKAYGTSNT NGLGHHELVD
201: AVYESHAQVR LQLSQPEQSH YKTSSNS

Arabidopsis Description

AGL17AGL17 [Source:UniProtKB/TrEMBL;Acc:A0A178W215]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.