Factsheet for Bra030222.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25613	Canola	nucleus	98.24	97.81
CDX89496	Canola	nucleus	94.27	93.45
Bra039921.1-P	Field mustard	nucleus	86.78	86.78
AT2G22630.2	Thale cress	nucleus	82.38	82.38
Bra010623.1-P	Field mustard	nucleus	74.89	79.44
Bra011797.1-P	Field mustard	nucleus	79.74	79.39
VIT_00s0211g00180.t01	Wine grape	nucleus	63.0	63.84
Solyc02g091550.1.1	Tomato	nucleus	63.0	60.85
KRH74451	Soybean	nucleus	56.83	58.11
Bra017638.1-P	Field mustard	nucleus	60.79	57.5
KRH39494	Soybean	nucleus	55.95	57.47
Bra040719.1-P	Field mustard	nucleus	34.8	46.47
Bra011509.1-P	Field mustard	nucleus	53.74	42.07
Bra004361.1-P	Field mustard	nucleus	29.96	35.98
Bra025411.1-P	Field mustard	nucleus	27.75	35.8
Bra037895.1-P	Field mustard	nucleus	35.68	35.22
Bra000696.1-P	Field mustard	nucleus	35.24	34.63
Bra012564.1-P	Field mustard	nucleus	35.68	32.27
Bra013364.1-P	Field mustard	nucleus	35.68	32.14
Bra006322.1-P	Field mustard	nucleus	34.36	31.2
Bra008674.1-P	Field mustard	nucleus	34.36	30.95
Bra007419.1-P	Field mustard	nucleus	33.04	30.61
Bra021470.1-P	Field mustard	nucleus	33.92	30.56
Bra014454.1-P	Field mustard	nucleus	30.84	30.43
Bra039170.1-P	Field mustard	nucleus	33.48	30.4
Bra010955.1-P	Field mustard	nucleus	32.6	30.33
Bra030032.1-P	Field mustard	nucleus	33.48	30.16
Bra029347.1-P	Field mustard	nucleus	31.72	30.0
Bra004716.1-P	Field mustard	nucleus	32.16	29.92
Bra004927.1-P	Field mustard	nucleus	31.72	29.75
Bra012997.1-P	Field mustard	nucleus	31.28	29.46
Bra035952.1-P	Field mustard	nucleus	31.28	29.46
Bra038326.1-P	Field mustard	nucleus	33.04	29.3
Bra000392.1-P	Field mustard	nucleus	33.04	29.18
Bra014552.1-P	Field mustard	nucleus	31.72	29.03
Bra032814.1-P	Field mustard	nucleus	32.16	28.85
Bra025126.1-P	Field mustard	nucleus	32.6	28.79
Bra011021.1-P	Field mustard	nucleus	32.16	28.74
Bra026543.1-P	Field mustard	nucleus	33.48	28.25
Bra036201.1-P	Field mustard	nucleus	29.96	27.42
Bra004007.1-P	Field mustard	nucleus	31.28	26.2
Bra017376.1-P	Field mustard	nucleus	27.75	25.93
Bra003356.1-P	Field mustard	nucleus	30.84	25.64

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EnsemblPlantsGene:Bra030222	EnsemblPlants:Bra030222.1	EnsemblPlants:Bra030222.1-P	GO:GO:0000977
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045944
GO:GO:0046983	InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	UniProt:M4EN52	InterPro:MADS_MEF2-like
PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404	ScanProsite:PS00350	PFscan:PS50066	PFscan:PS51297
PANTHER:PTHR11945	PANTHER:PTHR11945:SF263	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	UniParc:UPI0002544212	:	:	:	:

Description

AT2G22630 (E=7e-100) AGL17 | AGL17 (agamous-like 17); transcription factor

Coordinates

chrA04:+:9866643..9869693

Molecular Weight (calculated)

26177.4 Da

IEP (calculated)

9.065

GRAVY (calculated)

-0.717

Length

227 amino acids

Sequence
(BLAST)

001: MGRGKIVIKR IDDSTSRQVT FSKRRKGLIK KAKELAILCD AEVGLIIFSN TDKLYDFSSS SMKSAIERFN KTKMEQQQLL NPASEVMFWQ REAATLRQEL
101: HSLQEYHRQL MGEQLNGLSV NELHNIESTL EMSLRGIRMK KEQMLTDEIK ELTKKRNLIH HENLELSRKV QRIHQENVEL HKKAYATSNT NVLGLGELED
201: AADESHAQVR LQLSQPEQSC YDSPPKS

Best Arabidopsis Sequence Match ( AT2G22630.1 )
(BLAST)

001: MGRGKIVIQK IDDSTSRQVT FSKRRKGLIK KAKELAILCD AEVCLIIFSN TDKLYDFASS SVKSTIERFN TAKMEEQELM NPASEVKFWQ REAETLRQEL
101: HSLQENYRQL TGVELNGLSV KELQNIESQL EMSLRGIRMK REQILTNEIK ELTRKRNLVH HENLELSRKV QRIHQENVEL YKKAYGTSNT NGLGHHELVD
201: AVYESHAQVR LQLSQPEQSH YKTSSNS

Arabidopsis Description

AGL17AGL17 [Source:UniProtKB/TrEMBL;Acc:A0A178W215]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.