Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014552.1-P | Field mustard | nucleus | 91.43 | 90.32 |
| CDY49254 | Canola | nucleus | 99.59 | 88.73 |
| Bra004716.1-P | Field mustard | nucleus | 81.22 | 81.56 |
| AT3G58780.4 | Thale cress | nucleus | 93.06 | 81.14 |
| Bra003356.1-P | Field mustard | nucleus | 89.39 | 80.22 |
| KRH14461 | Soybean | nucleus | 32.24 | 75.96 |
| KRG98899 | Soybean | nucleus | 65.31 | 65.04 |
| KRH46066 | Soybean | nucleus | 65.31 | 64.78 |
| KRH73684 | Soybean | nucleus | 64.49 | 64.23 |
| GSMUA_Achr5P06590_001 | Banana | nucleus | 43.67 | 61.14 |
| GSMUA_Achr10P... | Banana | nucleus | 55.51 | 59.39 |
| Solyc07g055920.2.1 | Tomato | nucleus | 63.27 | 58.05 |
| VIT_12s0142g00360.t01 | Wine grape | nucleus | 64.49 | 57.66 |
| Bra013364.1-P | Field mustard | nucleus | 58.78 | 57.14 |
| Bra012564.1-P | Field mustard | nucleus | 58.37 | 56.97 |
| PGSC0003DMT400044552 | Potato | nucleus | 58.78 | 56.69 |
| Bra037895.1-P | Field mustard | nucleus | 53.06 | 56.52 |
| Bra000696.1-P | Field mustard | nucleus | 51.84 | 54.98 |
| GSMUA_Achr6P14760_001 | Banana | nucleus | 54.29 | 52.36 |
| Zm00001d039434_P001 | Maize | nucleus | 54.29 | 50.76 |
| EES00105 | Sorghum | nucleus | 55.51 | 50.56 |
| TraesCS1D01G262700.1 | Wheat | nucleus | 51.02 | 50.0 |
| TraesCS5B01G115100.1 | Wheat | nucleus | 51.43 | 50.0 |
| HORVU3Hr1G026650.1 | Barley | nucleus | 55.1 | 49.82 |
| Zm00001d023955_P003 | Maize | nucleus | 53.88 | 49.81 |
| HORVU1Hr1G023620.1 | Barley | nucleus | 51.02 | 49.6 |
| TraesCS3A01G314300.1 | Wheat | nucleus | 54.69 | 49.08 |
| TraesCS1B01G273300.1 | Wheat | nucleus | 51.02 | 49.02 |
| TraesCS3D01G140200.2 | Wheat | nucleus | 54.69 | 48.91 |
| TraesCS5A01G117500.1 | Wheat | nucleus | 50.61 | 48.82 |
| TraesCS5D01G118200.1 | Wheat | nucleus | 50.2 | 48.81 |
| Os01t0201700-02 | Rice | nucleus | 54.69 | 48.55 |
| Os05t0203800-02 | Rice | nucleus | 53.88 | 48.53 |
| Zm00001d042591_P002 | Maize | nucleus | 53.06 | 48.51 |
| EES15827 | Sorghum | nucleus | 52.65 | 47.96 |
| TraesCS1B01G144800.1 | Wheat | nucleus | 52.65 | 47.96 |
| TraesCS1A01G125800.1 | Wheat | nucleus | 52.24 | 47.58 |
| TraesCS1D01G127700.1 | Wheat | nucleus | 52.24 | 47.58 |
| Os01t0886200-01 | Rice | nucleus | 51.02 | 47.17 |
| Os12t0207000-01 | Rice | nucleus | 51.84 | 47.04 |
| EES01878 | Sorghum | nucleus | 53.06 | 46.93 |
| Zm00001d041781_P001 | Maize | nucleus | 54.29 | 46.34 |
| TraesCS1A01G262700.1 | Wheat | endoplasmic reticulum | 51.02 | 45.45 |
| GSMUA_Achr10P... | Banana | nucleus | 56.33 | 43.26 |
| TraesCS3B01G157500.4 | Wheat | nucleus | 54.69 | 43.23 |
| OQU77603 | Sorghum | nucleus | 48.16 | 40.41 |
| HORVU1Hr1G029220.1 | Barley | nucleus | 53.06 | 39.88 |
| Bra025411.1-P | Field mustard | nucleus | 28.57 | 39.77 |
| Zm00001d037737_P001 | Maize | nucleus | 49.39 | 39.54 |
| Zm00001d008882_P001 | Maize | nucleus | 49.39 | 36.78 |
| Bra004361.1-P | Field mustard | nucleus | 28.16 | 36.51 |
| Bra008674.1-P | Field mustard | nucleus | 37.55 | 36.51 |
| Bra006322.1-P | Field mustard | nucleus | 36.73 | 36.0 |
| Bra010955.1-P | Field mustard | nucleus | 35.51 | 35.66 |
| Bra017638.1-P | Field mustard | nucleus | 34.69 | 35.42 |
| Bra039170.1-P | Field mustard | nucleus | 35.92 | 35.2 |
| Bra030032.1-P | Field mustard | nucleus | 35.92 | 34.92 |
| Bra021470.1-P | Field mustard | nucleus | 35.92 | 34.92 |
| Bra032814.1-P | Field mustard | nucleus | 35.51 | 34.39 |
| Bra010623.1-P | Field mustard | nucleus | 29.39 | 33.64 |
| Bra039921.1-P | Field mustard | nucleus | 31.02 | 33.48 |
| Bra000392.1-P | Field mustard | nucleus | 35.1 | 33.46 |
| Bra011797.1-P | Field mustard | nucleus | 31.02 | 33.33 |
| Bra004927.1-P | Field mustard | nucleus | 32.65 | 33.06 |
| Bra030222.1-P | Field mustard | nucleus | 30.61 | 33.04 |
| Bra012997.1-P | Field mustard | nucleus | 31.43 | 31.95 |
| Bra025126.1-P | Field mustard | nucleus | 33.47 | 31.91 |
| Bra029347.1-P | Field mustard | nucleus | 31.02 | 31.67 |
| Bra035952.1-P | Field mustard | nucleus | 31.02 | 31.54 |
| Bra014454.1-P | Field mustard | nucleus | 29.39 | 31.3 |
| Bra026543.1-P | Field mustard | nucleus | 33.88 | 30.86 |
| Bra011021.1-P | Field mustard | nucleus | 31.02 | 29.92 |
| Bra036201.1-P | Field mustard | nucleus | 29.39 | 29.03 |
| Bra038326.1-P | Field mustard | nucleus | 30.2 | 28.91 |
| Bra017376.1-P | Field mustard | nucleus | 28.16 | 28.4 |
| Bra004007.1-P | Field mustard | nucleus | 30.2 | 27.31 |
| Bra011509.1-P | Field mustard | nucleus | 31.43 | 26.55 |
| Bra040719.1-P | Field mustard | nucleus | 15.1 | 21.76 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EnsemblPlantsGene:Bra007419 | EnsemblPlants:Bra007419.1 | EnsemblPlants:Bra007419.1-P | GO:GO:0000977 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | UniProt:M4CT77 | InterPro:MADS_MEF2-like |
| PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF150 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | UniParc:UPI0002542E52 | SEG:seg | : | : | : |
Description
AT3G58780 (E=2e-116) SHP1, AGL1 | SHP1 (SHATTERPROOF 1); DNA binding / protein binding / transcription factor
Coordinates
chrA09:+:29098486..29101243
Molecular Weight (calculated)
27757.9 Da
IEP (calculated)
9.413
GRAVY (calculated)
-0.783
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEGGSSHDA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VIFSTRGRLY EYASNSVKGT IERYKKACSD AVNPPTVTEA
101: NTKYYQQEAS KLRRQIRDIQ NSNRHIVGES LGSLNFKELK NLEGRLEKGI SRVRSKKSEL LVAEIEYMQK REMELQHDNM YLRAKIEQGA RLNPEQHGSG
201: VIQGTAVYES GLSSSHDQSQ HYIPVNLLEP NQQFSGQDQP PLQLV
101: NTKYYQQEAS KLRRQIRDIQ NSNRHIVGES LGSLNFKELK NLEGRLEKGI SRVRSKKSEL LVAEIEYMQK REMELQHDNM YLRAKIEQGA RLNPEQHGSG
201: VIQGTAVYES GLSSSHDQSQ HYIPVNLLEP NQQFSGQDQP PLQLV
001: MEEGGSSHDA ESSKKLGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPSVTEA
101: NTQYYQQEAS KLRRQIRDIQ NSNRHIVGES LGSLNFKELK NLEGRLEKGI SRVRSKKNEL LVAEIEYMQK REMELQHNNM YLRAKIAEGA RLNPDQQESS
201: VIQGTTVYES GVSSHDQSQH YNRNYIPVNL LEPNQQFSGQ DQPPLQLV
101: NTQYYQQEAS KLRRQIRDIQ NSNRHIVGES LGSLNFKELK NLEGRLEKGI SRVRSKKNEL LVAEIEYMQK REMELQHNNM YLRAKIAEGA RLNPDQQESS
201: VIQGTTVYES GVSSHDQSQH YNRNYIPVNL LEPNQQFSGQ DQPPLQLV
Arabidopsis Description
SHP1K-box region and MADS-box transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LM26]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.