Factsheet for Bra014552.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007419.1-P	Field mustard	nucleus	90.32	91.43
CDX89005	Canola	nucleus	99.6	89.49
CDY00589	Canola	nucleus	97.58	88.0
Bra004716.1-P	Field mustard	nucleus	81.85	83.2
AT3G58780.4	Thale cress	nucleus	92.34	81.49
Bra003356.1-P	Field mustard	nucleus	89.52	81.32
KRH14461	Soybean	nucleus	32.26	76.92
KRG98899	Soybean	nucleus	65.73	66.26
KRH46066	Soybean	nucleus	65.73	65.99
KRH73684	Soybean	nucleus	64.11	64.63
GSMUA_Achr5P06590_001	Banana	nucleus	43.55	61.71
GSMUA_Achr10P...	Banana	nucleus	55.65	60.26
Solyc07g055920.2.1	Tomato	nucleus	63.71	59.18
VIT_12s0142g00360.t01	Wine grape	nucleus	64.52	58.39
Bra013364.1-P	Field mustard	nucleus	59.27	58.33
Bra012564.1-P	Field mustard	nucleus	58.87	58.17
PGSC0003DMT400044552	Potato	nucleus	58.87	57.48
Bra037895.1-P	Field mustard	nucleus	52.02	56.09
Bra000696.1-P	Field mustard	nucleus	50.81	54.55
GSMUA_Achr6P14760_001	Banana	nucleus	55.65	54.33
TraesCS5B01G115100.1	Wheat	nucleus	52.82	51.98
Zm00001d039434_P001	Maize	nucleus	54.84	51.91
EES00105	Sorghum	nucleus	55.24	50.93
TraesCS1D01G262700.1	Wheat	nucleus	51.21	50.8
HORVU1Hr1G023620.1	Barley	nucleus	51.61	50.79
TraesCS5D01G118200.1	Wheat	nucleus	51.61	50.79
TraesCS5A01G117500.1	Wheat	nucleus	52.02	50.79
HORVU3Hr1G026650.1	Barley	nucleus	54.84	50.18
TraesCS1B01G273300.1	Wheat	nucleus	51.21	49.8
Os01t0201700-02	Rice	nucleus	55.24	49.64
TraesCS3A01G314300.1	Wheat	nucleus	54.44	49.45
Zm00001d023955_P003	Maize	nucleus	52.82	49.43
TraesCS3D01G140200.2	Wheat	nucleus	54.44	49.27
Os05t0203800-02	Rice	nucleus	54.03	49.26
Os12t0207000-01	Rice	nucleus	52.82	48.52
Zm00001d042591_P002	Maize	nucleus	52.42	48.51
EES15827	Sorghum	nucleus	52.42	48.33
TraesCS1B01G144800.1	Wheat	nucleus	52.42	48.33
TraesCS1D01G127700.1	Wheat	nucleus	52.02	47.96
TraesCS1A01G125800.1	Wheat	nucleus	52.02	47.96
Os01t0886200-01	Rice	nucleus	50.81	47.55
EES01878	Sorghum	nucleus	52.42	46.93
Zm00001d041781_P001	Maize	nucleus	53.23	45.99
TraesCS1A01G262700.1	Wheat	endoplasmic reticulum	50.81	45.82
GSMUA_Achr10P...	Banana	nucleus	56.45	43.89
TraesCS3B01G157500.4	Wheat	nucleus	54.44	43.55
OQU77603	Sorghum	nucleus	48.79	41.44
Bra025411.1-P	Field mustard	nucleus	28.63	40.34
Zm00001d037737_P001	Maize	nucleus	49.6	40.2
HORVU1Hr1G029220.1	Barley	nucleus	52.82	40.18
Zm00001d008882_P001	Maize	nucleus	49.6	37.39
Bra004361.1-P	Field mustard	nucleus	27.82	36.51
Bra008674.1-P	Field mustard	nucleus	35.89	35.32
Bra006322.1-P	Field mustard	nucleus	35.08	34.8
Bra039170.1-P	Field mustard	nucleus	35.08	34.8
Bra021470.1-P	Field mustard	nucleus	35.08	34.52
Bra010955.1-P	Field mustard	nucleus	33.47	34.02
Bra030032.1-P	Field mustard	nucleus	33.87	33.33
Bra017638.1-P	Field mustard	nucleus	32.26	33.33
Bra010623.1-P	Field mustard	nucleus	28.23	32.71
Bra000392.1-P	Field mustard	nucleus	33.87	32.68
Bra029347.1-P	Field mustard	nucleus	31.45	32.5
Bra032814.1-P	Field mustard	nucleus	33.06	32.41
Bra035952.1-P	Field mustard	nucleus	31.45	32.37
Bra039921.1-P	Field mustard	nucleus	29.44	32.16
Bra011797.1-P	Field mustard	nucleus	29.44	32.02
Bra012997.1-P	Field mustard	nucleus	31.05	31.95
Bra004927.1-P	Field mustard	nucleus	31.05	31.82
Bra030222.1-P	Field mustard	nucleus	29.03	31.72
Bra014454.1-P	Field mustard	nucleus	28.63	30.87
Bra025126.1-P	Field mustard	nucleus	31.45	30.35
Bra011021.1-P	Field mustard	nucleus	31.05	30.32
Bra036201.1-P	Field mustard	nucleus	29.84	29.84
Bra026543.1-P	Field mustard	nucleus	32.26	29.74
Bra038326.1-P	Field mustard	nucleus	29.84	28.91
Bra017376.1-P	Field mustard	nucleus	27.02	27.57
Bra004007.1-P	Field mustard	nucleus	29.84	27.31
Bra011509.1-P	Field mustard	nucleus	29.03	24.83
Bra040719.1-P	Field mustard	nucleus	14.11	20.59

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EnsemblPlantsGene:Bra014552	EnsemblPlants:Bra014552.1	EnsemblPlants:Bra014552.1-P	ncoils:Coil
GO:GO:0000977	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0045944	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	UniProt:M4DDI4
InterPro:MADS_MEF2-like	PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404	ScanProsite:PS00350	PFscan:PS50066
PFscan:PS51297	PANTHER:PTHR11945	PANTHER:PTHR11945:SF150	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox
InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI0002543FEA	:	:	:

Description

AT3G58780 (E=2e-129) SHP1, AGL1 | SHP1 (SHATTERPROOF 1); DNA binding / protein binding / transcription factor

Coordinates

chrA04:-:1406025..1409785

Molecular Weight (calculated)

28394.6 Da

IEP (calculated)

9.036

GRAVY (calculated)

-0.812

Length

248 amino acids

Sequence
(BLAST)

001: MEEGGSSHDA ESNKKLVRGK IEIKRIENTT SRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VVFSTRGRLY EYANNSVKGT IERYKKACSD AVNPPTVTEA
101: NTQYYQQEAS KLRRQIRDIQ NSNRHIVGES LGSLNFKELK NLEGRLEKGI NRVRSKKNEL LVAELEYMQK REIELQHDNM YLRAKITHCA RLDPEQQESS
201: VIQGTAVYES GLSSHDQSQN YNRSYIPVNL LEPNQQFSGQ DQPPLQLV

Best Arabidopsis Sequence Match ( AT3G58780.5 )
(BLAST)

001: MSYIGSMEEG GSSHDAESSK KLGRGKIEIK RIENTTNRQV TFCKRRNGLL KKAYELSVLC DAEVALVIFS TRGRLYEYAN NSVRGTIERY KKACSDAVNP
101: PSVTEANTQY YQQEASKLRR QIRDIQNSNR HIVGESLGSL NFKELKNLEG RLEKGISRVR SKKNELLVAE IEYMQKREME LQHNNMYLRA KIAEGARLNP
201: DQQESSVIQG TTVYESGVSS HDQSQHYNRN YIPVNLLEPN QQFSGQDQPP LQLV

Arabidopsis Description

SHP1K-box region and MADS-box transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LM26]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.