Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46066 | Soybean | nucleus | 97.97 | 97.57 |
| KRH64836 | Soybean | nucleus | 22.76 | 93.33 |
| KRH14461 | Soybean | nucleus | 36.99 | 87.5 |
| KRH11093 | Soybean | nucleus | 26.02 | 85.33 |
| KRH73684 | Soybean | nucleus | 84.96 | 84.96 |
| KRH75125 | Soybean | nucleus | 18.29 | 73.77 |
| CDX79857 | Canola | nucleus | 68.7 | 69.26 |
| Bra004716.1-P | Field mustard | nucleus | 68.7 | 69.26 |
| AT2G42830.2 | Thale cress | nucleus | 67.48 | 66.94 |
| Bra014552.1-P | Field mustard | nucleus | 66.26 | 65.73 |
| Bra007419.1-P | Field mustard | nucleus | 65.04 | 65.31 |
| CDX98330 | Canola | nucleus | 65.45 | 64.92 |
| GSMUA_Achr10P... | Banana | nucleus | 59.35 | 63.76 |
| KRH21150 | Soybean | nucleus | 62.6 | 63.37 |
| VIT_12s0142g00360.t01 | Wine grape | nucleus | 70.33 | 63.14 |
| KRH42930 | Soybean | nucleus | 61.38 | 62.14 |
| Solyc07g055920.2.1 | Tomato | nucleus | 67.07 | 61.8 |
| KRH56460 | Soybean | nucleus | 55.69 | 61.71 |
| PGSC0003DMT400044552 | Potato | nucleus | 63.41 | 61.42 |
| KRH59043 | Soybean | nucleus | 60.16 | 60.91 |
| AT3G58780.4 | Thale cress | nucleus | 68.7 | 60.14 |
| CDY49254 | Canola | nucleus | 65.85 | 58.91 |
| CDX89005 | Canola | nucleus | 65.85 | 58.7 |
| GSMUA_Achr5P06590_001 | Banana | nucleus | 41.46 | 58.29 |
| CDY00589 | Canola | nucleus | 64.63 | 57.82 |
| Bra003356.1-P | Field mustard | nucleus | 63.41 | 57.14 |
| KRH11095 | Soybean | nucleus | 37.4 | 55.09 |
| GSMUA_Achr6P14760_001 | Banana | nucleus | 56.5 | 54.72 |
| TraesCS1D01G262700.1 | Wheat | nucleus | 54.06 | 53.2 |
| EES00105 | Sorghum | nucleus | 58.13 | 53.16 |
| HORVU3Hr1G026650.1 | Barley | nucleus | 58.54 | 53.14 |
| Zm00001d039434_P001 | Maize | nucleus | 56.1 | 52.67 |
| TraesCS5B01G115100.1 | Wheat | nucleus | 53.66 | 52.38 |
| TraesCS3A01G314300.1 | Wheat | nucleus | 58.13 | 52.38 |
| Os01t0201700-02 | Rice | nucleus | 58.54 | 52.17 |
| KRG97386 | Soybean | nucleus | 30.49 | 52.08 |
| Zm00001d023955_P003 | Maize | nucleus | 56.1 | 52.08 |
| TraesCS1B01G144800.1 | Wheat | nucleus | 56.91 | 52.04 |
| TraesCS1B01G273300.1 | Wheat | nucleus | 53.66 | 51.76 |
| Os01t0886200-01 | Rice | nucleus | 55.69 | 51.7 |
| TraesCS1D01G127700.1 | Wheat | nucleus | 56.5 | 51.67 |
| HORVU1Hr1G023620.1 | Barley | nucleus | 52.85 | 51.59 |
| TraesCS3D01G140200.2 | Wheat | nucleus | 57.32 | 51.46 |
| TraesCS1A01G125800.1 | Wheat | nucleus | 56.1 | 51.3 |
| TraesCS5D01G118200.1 | Wheat | nucleus | 52.44 | 51.19 |
| TraesCS5A01G117500.1 | Wheat | nucleus | 52.85 | 51.18 |
| Zm00001d042591_P002 | Maize | nucleus | 55.28 | 50.75 |
| KRH64830 | Soybean | nucleus | 32.93 | 50.31 |
| Os12t0207000-01 | Rice | nucleus | 54.88 | 50.0 |
| EES15827 | Sorghum | nucleus | 54.47 | 49.81 |
| KRH40560 | Soybean | nucleus | 31.3 | 49.68 |
| Os05t0203800-02 | Rice | nucleus | 54.88 | 49.63 |
| EES01878 | Sorghum | nucleus | 55.69 | 49.46 |
| TraesCS1A01G262700.1 | Wheat | endoplasmic reticulum | 53.66 | 48.0 |
| Zm00001d041781_P001 | Maize | nucleus | 55.69 | 47.74 |
| CDX67765 | Canola | nucleus | 67.48 | 47.7 |
| GSMUA_Achr10P... | Banana | nucleus | 61.79 | 47.65 |
| TraesCS3B01G157500.4 | Wheat | nucleus | 57.32 | 45.48 |
| OQU77603 | Sorghum | nucleus | 52.44 | 44.18 |
| HORVU1Hr1G029220.1 | Barley | nucleus | 56.91 | 42.94 |
| Zm00001d037737_P001 | Maize | nucleus | 51.22 | 41.18 |
| KRH48304 | Soybean | nucleus | 39.02 | 39.18 |
| KRH65193 | Soybean | nucleus | 39.02 | 39.18 |
| KRH58800 | Soybean | nucleus | 38.62 | 38.93 |
| KRH42695 | Soybean | nucleus | 38.62 | 38.93 |
| Zm00001d008882_P001 | Maize | nucleus | 51.22 | 38.3 |
| KRH42051 | Soybean | nucleus | 33.74 | 37.56 |
| KRH56775 | Soybean | nucleus | 36.99 | 37.45 |
| KRH03170 | Soybean | nucleus | 36.99 | 37.45 |
| KRH00622 | Soybean | nucleus | 36.18 | 37.24 |
| KRH31527 | Soybean | nucleus | 36.18 | 36.63 |
| KRH07467 | Soybean | nucleus | 34.96 | 36.44 |
| KRH45097 | Soybean | nucleus | 36.99 | 36.26 |
| KRH18339 | Soybean | nucleus | 36.59 | 36.14 |
| KRH45412 | Soybean | nucleus | 34.55 | 36.02 |
| KRG93698 | Soybean | nucleus | 36.18 | 35.74 |
| KRH70973 | Soybean | nucleus | 35.37 | 35.66 |
| KRH01380 | Soybean | nucleus | 36.59 | 35.29 |
| KRH75123 | Soybean | nucleus | 34.96 | 34.96 |
| KRH16883 | Soybean | nucleus | 33.74 | 34.73 |
| KRH70974 | Soybean | nucleus | 33.74 | 34.16 |
| KRH42047 | Soybean | nucleus | 33.33 | 34.02 |
| KRH63171 | Soybean | nucleus | 33.74 | 34.02 |
| KRH10635 | Soybean | nucleus | 34.15 | 33.73 |
| KRH54740 | Soybean | nucleus | 33.33 | 33.61 |
| KRH74451 | Soybean | nucleus | 30.08 | 33.33 |
| KRH09173 | Soybean | nucleus | 31.71 | 33.05 |
| KRH39494 | Soybean | nucleus | 29.27 | 32.58 |
| KRH72490 | Soybean | nucleus | 32.11 | 32.51 |
| KRH56774 | Soybean | nucleus | 31.71 | 31.97 |
| KRH35403 | Soybean | nucleus | 30.08 | 31.9 |
| KRH03173 | Soybean | nucleus | 30.89 | 31.8 |
| KRG91419 | Soybean | nucleus | 29.27 | 31.3 |
| KRH38649 | Soybean | nucleus | 30.89 | 31.15 |
| KRH45099 | Soybean | nucleus | 30.49 | 30.24 |
| KRG93701 | Soybean | nucleus | 29.67 | 29.92 |
| KRH01382 | Soybean | nucleus | 30.08 | 29.25 |
| KRH18331 | Soybean | nucleus | 27.64 | 27.87 |
| KRH21716 | Soybean | nucleus | 16.67 | 21.47 |
| KRH66116 | Soybean | nucleus, plastid | 1.22 | 3.8 |
Protein Annotations
| EntrezGene:100808734 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02010931 | ncoils:Coil | EnsemblPlantsGene:GLYMA_18G105800 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | UniProt:K7MR53 |
| EnsemblPlants:KRG98899 | ProteinID:KRG98899 | ProteinID:KRG98899.1 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF150 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0002956825 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:11773697..11782733
Molecular Weight (calculated)
28201.4 Da
IEP (calculated)
9.708
GRAVY (calculated)
-0.790
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSTMEDPNQ AQEGSSQKKM GRGKIEIKRI ENTTNRQVTF CKRRNGLLKK AYELSVLCDA EVALVVFSTR GRLYEYANNS VRATIERYKK ANAAASNAES
101: VSEANTQFYQ QESSKLRRQI RDIQNLNRHI LGEALGSLSL KELKNLEGRL EKGLSRVRSR KHETLFADVE FMQKREIELQ NHNNILRAKI AEHERAQQQQ
201: SNMMSGTLCE SLPSQSYDRN FFPVNLIASD DQQQYSSQDH TALQLV
101: VSEANTQFYQ QESSKLRRQI RDIQNLNRHI LGEALGSLSL KELKNLEGRL EKGLSRVRSR KHETLFADVE FMQKREIELQ NHNNILRAKI AEHERAQQQQ
201: SNMMSGTLCE SLPSQSYDRN FFPVNLIASD DQQQYSSQDH TALQLV
001: MSYIGSMEEG GSSHDAESSK KLGRGKIEIK RIENTTNRQV TFCKRRNGLL KKAYELSVLC DAEVALVIFS TRGRLYEYAN NSVRGTIERY KKACSDAVNP
101: PSVTEANTQY YQQEASKLRR QIRDIQNSNR HIVGESLGSL NFKELKNLEG RLEKGISRVR SKKNELLVAE IEYMQKREME LQHNNMYLRA KIAEGARLNP
201: DQQESSVIQG TTVYESGVSS HDQSQHYNRN YIPVNLLEPN QQFSGQDQPP LQLV
101: PSVTEANTQY YQQEASKLRR QIRDIQNSNR HIVGESLGSL NFKELKNLEG RLEKGISRVR SKKNELLVAE IEYMQKREME LQHNNMYLRA KIAEGARLNP
201: DQQESSVIQG TTVYESGVSS HDQSQHYNRN YIPVNLLEPN QQFSGQDQPP LQLV
Arabidopsis Description
SHP1K-box region and MADS-box transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LM26]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.