Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004716.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY72391 | Canola | nucleus | 30.74 | 100.0 |
| CDX79856 | Canola | nucleus | 33.61 | 92.13 |
| AT2G42830.2 | Thale cress | nucleus | 93.44 | 91.94 |
| CDX71922 | Canola | nucleus | 47.54 | 85.93 |
| CDX98330 | Canola | nucleus | 82.79 | 81.45 |
| KRH14461 | Soybean | nucleus | 33.61 | 78.85 |
| CDY49254 | Canola | nucleus | 83.2 | 73.82 |
| CDX89005 | Canola | nucleus | 82.79 | 73.19 |
| CDY00589 | Canola | nucleus | 81.56 | 72.36 |
| KRG98899 | Soybean | nucleus | 69.26 | 68.7 |
| KRH46066 | Soybean | nucleus | 69.26 | 68.42 |
| KRH73684 | Soybean | nucleus | 67.62 | 67.07 |
| GSMUA_Achr10P... | Banana | nucleus | 58.2 | 62.01 |
| GSMUA_Achr5P06590_001 | Banana | nucleus | 43.44 | 60.57 |
| VIT_12s0142g00360.t01 | Wine grape | nucleus | 66.8 | 59.49 |
| Solyc07g055920.2.1 | Tomato | nucleus | 64.75 | 59.18 |
| CDX67765 | Canola | nucleus | 84.02 | 58.91 |
| CDY60686 | Canola | cytosol, nucleus, plastid | 15.98 | 58.21 |
| CDY09267 | Canola | nucleus | 59.02 | 57.83 |
| CDX90741 | Canola | nucleus | 54.51 | 57.58 |
| PGSC0003DMT400044552 | Potato | nucleus | 59.84 | 57.48 |
| CDX78909 | Canola | nucleus | 59.02 | 57.14 |
| CDX98597 | Canola | nucleus | 58.2 | 56.57 |
| GSMUA_Achr6P14760_001 | Banana | nucleus | 57.38 | 55.12 |
| Zm00001d039434_P001 | Maize | nucleus | 56.15 | 52.29 |
| EES00105 | Sorghum | nucleus | 56.56 | 51.3 |
| TraesCS1D01G262700.1 | Wheat | nucleus | 52.46 | 51.2 |
| TraesCS5B01G115100.1 | Wheat | nucleus | 52.46 | 50.79 |
| Os01t0201700-02 | Rice | nucleus | 57.38 | 50.72 |
| HORVU3Hr1G026650.1 | Barley | nucleus | 56.15 | 50.55 |
| HORVU1Hr1G023620.1 | Barley | nucleus | 52.05 | 50.4 |
| TraesCS5D01G118200.1 | Wheat | nucleus | 51.64 | 50.0 |
| TraesCS3A01G314300.1 | Wheat | nucleus | 55.74 | 49.82 |
| Zm00001d023955_P003 | Maize | nucleus | 54.1 | 49.81 |
| TraesCS1B01G273300.1 | Wheat | nucleus | 52.05 | 49.8 |
| TraesCS3D01G140200.2 | Wheat | nucleus | 55.74 | 49.63 |
| TraesCS5A01G117500.1 | Wheat | nucleus | 51.64 | 49.61 |
| CDY65347 | Canola | nucleus | 31.56 | 48.73 |
| Os12t0207000-01 | Rice | nucleus | 53.69 | 48.52 |
| Zm00001d042591_P002 | Maize | nucleus | 53.28 | 48.51 |
| EES15827 | Sorghum | nucleus | 53.28 | 48.33 |
| TraesCS1B01G144800.1 | Wheat | nucleus | 53.28 | 48.33 |
| Os05t0203800-02 | Rice | nucleus | 53.69 | 48.16 |
| TraesCS1A01G125800.1 | Wheat | nucleus | 52.87 | 47.96 |
| TraesCS1D01G127700.1 | Wheat | nucleus | 52.87 | 47.96 |
| Os01t0886200-01 | Rice | nucleus | 51.64 | 47.55 |
| EES01878 | Sorghum | nucleus | 53.69 | 47.29 |
| CDY13236 | Canola | mitochondrion | 38.11 | 46.27 |
| TraesCS1A01G262700.1 | Wheat | endoplasmic reticulum | 52.05 | 46.18 |
| Zm00001d041781_P001 | Maize | nucleus | 54.1 | 45.99 |
| CDX99406 | Canola | nucleus | 58.61 | 45.83 |
| CDY60297 | Canola | nucleus | 53.69 | 44.86 |
| CDY48451 | Canola | nucleus | 27.87 | 44.44 |
| GSMUA_Achr10P... | Banana | nucleus | 57.79 | 44.2 |
| TraesCS3B01G157500.4 | Wheat | nucleus | 55.74 | 43.87 |
| CDY19977 | Canola | nucleus | 18.03 | 43.14 |
| CDY01574 | Canola | nucleus | 21.31 | 42.28 |
| OQU77603 | Sorghum | nucleus | 49.18 | 41.1 |
| Zm00001d037737_P001 | Maize | nucleus | 50.41 | 40.2 |
| HORVU1Hr1G029220.1 | Barley | nucleus | 53.28 | 39.88 |
| Zm00001d008882_P001 | Maize | nucleus | 50.82 | 37.69 |
| CDY26462 | Canola | nucleus | 37.3 | 35.83 |
| CDY15724 | Canola | nucleus | 36.89 | 35.71 |
| CDY43239 | Canola | nucleus | 36.48 | 35.6 |
| CDY11824 | Canola | nucleus | 35.66 | 35.51 |
| CDY66153 | Canola | nucleus | 35.66 | 35.51 |
| CDY18911 | Canola | nucleus | 34.43 | 35.44 |
| CDY71878 | Canola | endoplasmic reticulum | 38.11 | 35.36 |
| CDY57524 | Canola | nucleus | 36.07 | 35.2 |
| CDY34718 | Canola | nucleus | 36.07 | 34.92 |
| CDY34564 | Canola | nucleus | 31.15 | 34.86 |
| CDX69499 | Canola | nucleus | 37.7 | 34.85 |
| CDY36077 | Canola | nucleus | 31.56 | 34.84 |
| CDX78653 | Canola | nucleus | 36.89 | 34.75 |
| CDY02185 | Canola | nucleus | 34.02 | 34.44 |
| CDX70651 | Canola | nucleus | 36.48 | 34.36 |
| CDX84935 | Canola | nucleus | 35.25 | 34.26 |
| CDX72465 | Canola | nucleus | 33.61 | 34.17 |
| CDY42841 | Canola | nucleus | 33.61 | 34.17 |
| CDY58690 | Canola | nucleus | 33.61 | 34.02 |
| CDY27603 | Canola | nucleus | 35.25 | 33.99 |
| CDX74754 | Canola | nucleus | 35.66 | 33.98 |
| CDY53885 | Canola | nucleus | 35.66 | 33.85 |
| CDY49287 | Canola | nucleus | 33.2 | 33.75 |
| CDY18912 | Canola | nucleus | 33.2 | 33.61 |
| CDY47002 | Canola | nucleus | 33.2 | 33.61 |
| CDX69345 | Canola | nucleus | 31.15 | 33.48 |
| CDY03905 | Canola | nucleus | 36.89 | 33.33 |
| CDY16832 | Canola | nucleus | 32.79 | 33.2 |
| CDX75686 | Canola | nucleus | 31.15 | 33.19 |
| CDX69036 | Canola | nucleus | 32.38 | 32.92 |
| CDX75412 | Canola | nucleus | 32.38 | 32.92 |
| CDX90394 | Canola | nucleus | 30.74 | 32.75 |
| CDY25613 | Canola | nucleus | 30.33 | 32.46 |
| CDX89496 | Canola | nucleus | 30.33 | 32.31 |
| CDY04164 | Canola | nucleus | 34.02 | 32.17 |
| CDY02978 | Canola | nucleus | 32.79 | 31.25 |
| CDY51202 | Canola | nucleus | 32.79 | 31.13 |
| CDY65811 | Canola | nucleus | 31.97 | 30.47 |
| CDX89097 | Canola | nucleus | 30.33 | 30.08 |
| CDY33554 | Canola | nucleus | 31.56 | 30.08 |
| CDX95960 | Canola | nucleus | 31.15 | 29.69 |
| CDY00082 | Canola | nucleus | 29.92 | 29.44 |
| CDX86353 | Canola | nucleus | 29.92 | 29.32 |
| CDY45899 | Canola | nucleus | 29.51 | 28.92 |
| CDY04265 | Canola | nucleus | 32.38 | 28.52 |
| CDY07357 | Canola | nucleus | 32.38 | 27.34 |
| CDY33113 | Canola | nucleus | 34.02 | 26.86 |
| CDX71166 | Canola | nucleus | 31.15 | 21.84 |
| CDY42485 | Canola | nucleus | 31.15 | 20.11 |
| CDX85287 | Canola | nucleus | 15.16 | 19.79 |
| CDY35780 | Canola | nucleus | 14.34 | 17.77 |
| CDY45709 | Canola | nucleus | 11.07 | 15.61 |
| CDY49686 | Canola | nucleus | 11.07 | 15.61 |
| CDY65346 | Canola | cytosol | 1.23 | 12.0 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:B1PHV6 | UniProt:B1PHV6 | EnsemblPlants:CDX79857 | ProteinID:CDX79857 |
| ProteinID:CDX79857.1 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00132708001 | InterPro:IPR002100 |
| InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 |
| ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF150 | SMART:SM00432 |
| SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000171F0C7 | SEG:seg |
Description
BnaA05g02990DAgamous-like MADS-box protein AGL5 [Source:Projected from Arabidopsis thaliana (AT2G42830) UniProtKB/Swiss-Prot;Acc:P29385]
Coordinates
chrLK031819:+:531687..535518
Molecular Weight (calculated)
28007.2 Da
IEP (calculated)
9.397
GRAVY (calculated)
-0.868
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGASDEVA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPSVTEA
101: NTQYYQQESS KLRRQIRDIQ NLNRHILGES LGSLNLKELK NLEGRLEKGI GRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKINERA GMQQQEASVI
201: HQQGTVYESS SHQSEQYNRN YIPVNLLEPN QNSSDQNQPP LQLV
101: NTQYYQQESS KLRRQIRDIQ NLNRHILGES LGSLNLKELK NLEGRLEKGI GRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKINERA GMQQQEASVI
201: HQQGTVYESS SHQSEQYNRN YIPVNLLEPN QNSSDQNQPP LQLV
001: MEGGASNEVA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPTITEA
101: NTQYYQQEAS KLRRQIRDIQ NLNRHILGES LGSLNFKELK NLESRLEKGI SRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKITERT GLQQQESSVI
201: HQGTVYESGV TSSHQSGQYN RNYIAVNLLE PNQNSSNQDQ PPLQLV
101: NTQYYQQEAS KLRRQIRDIQ NLNRHILGES LGSLNFKELK NLESRLEKGI SRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKITERT GLQQQESSVI
201: HQGTVYESGV TSSHQSGQYN RNYIAVNLLE PNQNSSNQDQ PPLQLV
Arabidopsis Description
SHP2K-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT2G42830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.