Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01574 | Canola | nucleus | 54.73 | 89.43 |
| CDX78909 | Canola | nucleus | 90.05 | 71.83 |
| CDY09267 | Canola | nucleus | 85.57 | 69.08 |
| CDX98597 | Canola | nucleus | 83.08 | 66.53 |
| CDX99406 | Canola | nucleus | 90.55 | 58.33 |
| CDY65347 | Canola | nucleus | 36.32 | 46.2 |
| CDX98330 | Canola | nucleus | 50.75 | 41.13 |
| CDX90741 | Canola | nucleus | 44.78 | 38.96 |
| CDX79857 | Canola | nucleus | 46.27 | 38.11 |
| CDX89005 | Canola | nucleus | 48.26 | 35.14 |
| CDY49254 | Canola | nucleus | 47.76 | 34.91 |
| CDY00589 | Canola | nucleus | 47.26 | 34.55 |
| CDY71878 | Canola | endoplasmic reticulum | 43.78 | 33.46 |
| CDX71922 | Canola | nucleus | 21.89 | 32.59 |
| CDY60297 | Canola | nucleus | 41.79 | 28.77 |
| CDX67765 | Canola | nucleus | 49.25 | 28.45 |
| CDY48451 | Canola | nucleus | 16.92 | 22.22 |
| CDY25613 | Canola | nucleus | 23.38 | 20.61 |
| CDX89496 | Canola | nucleus | 23.38 | 20.52 |
| CDX85287 | Canola | nucleus | 18.91 | 20.32 |
| CDY45709 | Canola | nucleus | 17.41 | 20.23 |
| CDY11824 | Canola | nucleus | 24.38 | 20.0 |
| CDY65346 | Canola | cytosol | 2.49 | 20.0 |
| CDY66153 | Canola | nucleus | 24.38 | 20.0 |
| CDY36077 | Canola | nucleus | 21.89 | 19.91 |
| CDX69345 | Canola | nucleus | 22.39 | 19.82 |
| CDY34564 | Canola | nucleus | 21.39 | 19.72 |
| CDY26462 | Canola | nucleus | 24.88 | 19.68 |
| CDY49686 | Canola | nucleus | 16.92 | 19.65 |
| CDX90394 | Canola | nucleus | 22.39 | 19.65 |
| CDY58690 | Canola | nucleus | 23.38 | 19.5 |
| CDY15724 | Canola | nucleus | 24.38 | 19.44 |
| CDY27603 | Canola | nucleus | 24.38 | 19.37 |
| CDX69499 | Canola | nucleus | 25.37 | 19.32 |
| CDX75686 | Canola | nucleus | 21.89 | 19.21 |
| CDY43239 | Canola | nucleus | 23.88 | 19.2 |
| CDY42841 | Canola | nucleus | 22.89 | 19.17 |
| CDX84935 | Canola | nucleus | 23.88 | 19.12 |
| CDY02185 | Canola | nucleus | 22.89 | 19.09 |
| CDY16832 | Canola | nucleus | 22.89 | 19.09 |
| CDY04164 | Canola | nucleus | 24.38 | 18.99 |
| CDY18911 | Canola | nucleus | 22.39 | 18.99 |
| CDY57524 | Canola | nucleus | 23.38 | 18.8 |
| CDX72465 | Canola | nucleus | 22.39 | 18.75 |
| CDY47002 | Canola | nucleus | 22.39 | 18.67 |
| CDY34718 | Canola | nucleus | 23.38 | 18.65 |
| CDX74754 | Canola | nucleus | 23.38 | 18.36 |
| CDY49287 | Canola | nucleus | 21.89 | 18.33 |
| CDY35780 | Canola | nucleus | 17.91 | 18.27 |
| CDY03905 | Canola | nucleus | 24.38 | 18.15 |
| CDX78653 | Canola | nucleus | 23.38 | 18.15 |
| CDX70651 | Canola | nucleus | 23.38 | 18.15 |
| CDX75412 | Canola | nucleus | 21.39 | 17.92 |
| CDY53885 | Canola | nucleus | 22.89 | 17.9 |
| CDY51202 | Canola | nucleus | 22.89 | 17.9 |
| CDX86353 | Canola | nucleus | 21.89 | 17.67 |
| CDY65811 | Canola | nucleus | 22.39 | 17.58 |
| CDY02978 | Canola | nucleus | 22.39 | 17.58 |
| CDX69036 | Canola | nucleus | 20.9 | 17.5 |
| CDY18912 | Canola | nucleus | 20.9 | 17.43 |
| CDY00082 | Canola | nucleus | 20.9 | 16.94 |
| CDY45899 | Canola | nucleus | 20.9 | 16.87 |
| CDY33554 | Canola | nucleus | 21.39 | 16.8 |
| CDX89097 | Canola | nucleus | 20.4 | 16.67 |
| CDX95960 | Canola | nucleus | 20.9 | 16.41 |
| CDY04265 | Canola | nucleus | 21.89 | 15.88 |
| CDY33113 | Canola | nucleus | 23.38 | 15.21 |
| CDY07357 | Canola | nucleus | 21.39 | 14.88 |
| CDX71166 | Canola | nucleus | 22.39 | 12.93 |
| CDY42485 | Canola | nucleus | 22.39 | 11.9 |
| CDY19977 | Canola | nucleus | 5.97 | 11.76 |
| CDY60686 | Canola | cytosol, nucleus, plastid | 2.99 | 8.96 |
| CDY72391 | Canola | nucleus | 2.99 | 8.0 |
| CDX79856 | Canola | nucleus | 3.48 | 7.87 |
Protein Annotations
| MapMan:35.1 | GO:A0A078FJ75 | UniProt:A0A078FJ75 | EnsemblPlants:CDY13236 | ProteinID:CDY13236 | ProteinID:CDY13236.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00071148001 | InterPro:IPR002487 | PFAM:PF01486 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF187 | InterPro:TF_Kbox | UniParc:UPI0004EED4B2 | SEG:seg | : | : |
Description
BnaC09g24200DBnaC09g24200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJ75]
Coordinates
chrLK032033:-:4060..5286
Molecular Weight (calculated)
23225.7 Da
IEP (calculated)
10.056
GRAVY (calculated)
-0.813
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MFHFVLTQKN RCLLLRFRIK ITQLSNVKGT IERYKKAISD NSNTGSVAEI NAQYYQQESA KLRQQIISIQ NSNRQLMGET IGSMSPKELR NLEGRLDRSV
101: NRIRSKKNEL LFAEIDYMQK REVDLHNDNQ LLRAKIAENE RNNPSMSLMP GGSNYEQIMP PPQTQPQPFD SRNYFQVAAL QPNNHHYSSA GREDQTALQL
201: V
101: NRIRSKKNEL LFAEIDYMQK REVDLHNDNQ LLRAKIAENE RNNPSMSLMP GGSNYEQIMP PPQTQPQPFD SRNYFQVAAL QPNNHHYSSA GREDQTALQL
201: V
001: TAYQSELGGD SSPLRKSGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA LIVFSSRGRL YEYSNNSVKG TIERYKKAIS DNSNTGSVAE
101: INAQYYQQES AKLRQQIISI QNSNRQLMGE TIGSMSPKEL RNLEGRLERS ITRIRSKKNE LLFSEIDYMQ KREVDLHNDN QILRAKIAEN ERNNPSISLM
201: PGGSNYEQLM PPPQTQSQPF DSRNYFQVAA LQPNNHHYSS AGRQDQTALQ LV
101: INAQYYQQES AKLRQQIISI QNSNRQLMGE TIGSMSPKEL RNLEGRLERS ITRIRSKKNE LLFSEIDYMQ KREVDLHNDN QILRAKIAEN ERNNPSISLM
201: PGGSNYEQLM PPPQTQSQPF DSRNYFQVAA LQPNNHHYSS AGRQDQTALQ LV
Arabidopsis Description
AGK-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT4G18960]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.