Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023955_P003 | Maize | nucleus | 87.46 | 94.72 |
| EES15827 | Sorghum | nucleus | 87.11 | 92.94 |
| Os12t0207000-01 | Rice | nucleus | 70.73 | 75.19 |
| TraesCS5D01G118200.1 | Wheat | nucleus | 65.85 | 75.0 |
| TraesCS5B01G115100.1 | Wheat | nucleus | 65.51 | 74.6 |
| HORVU1Hr1G023620.1 | Barley | nucleus | 65.51 | 74.6 |
| TraesCS5A01G117500.1 | Wheat | nucleus | 65.16 | 73.62 |
| KRH14461 | Soybean | nucleus | 24.74 | 68.27 |
| GSMUA_Achr10P... | Banana | nucleus | 48.78 | 61.14 |
| VIT_10s0003g02070.t01 | Wine grape | nucleus | 47.74 | 60.62 |
| KRH21150 | Soybean | nucleus | 48.08 | 56.79 |
| Zm00001d003409_P001 | Maize | nucleus | 17.07 | 56.32 |
| KRG98899 | Soybean | nucleus | 47.74 | 55.69 |
| GSMUA_Achr6P14760_001 | Banana | nucleus | 49.13 | 55.51 |
| KRH73684 | Soybean | nucleus | 47.39 | 55.28 |
| KRH42930 | Soybean | nucleus | 46.69 | 55.14 |
| KRH46066 | Soybean | nucleus | 47.39 | 55.06 |
| PGSC0003DMT400073134 | Potato | nucleus | 47.39 | 54.84 |
| Bra007419.1-P | Field mustard | nucleus | 46.34 | 54.29 |
| CDX79857 | Canola | nucleus | 45.99 | 54.1 |
| Bra004716.1-P | Field mustard | nucleus | 45.99 | 54.1 |
| Solyc02g071730.2.1 | Tomato | nucleus | 46.69 | 54.03 |
| KRH59043 | Soybean | nucleus | 45.3 | 53.5 |
| Bra014552.1-P | Field mustard | nucleus | 45.99 | 53.23 |
| CDX98330 | Canola | nucleus | 45.99 | 53.23 |
| Zm00001d039434_P001 | Maize | nucleus | 48.43 | 53.05 |
| AT2G42830.2 | Thale cress | nucleus | 45.64 | 52.82 |
| CDY09267 | Canola | nucleus | 44.95 | 51.81 |
| AT4G18960.1 | Thale cress | nucleus | 45.3 | 51.59 |
| Zm00001d042591_P002 | Maize | nucleus | 48.08 | 51.49 |
| Bra013364.1-P | Field mustard | nucleus | 44.95 | 51.19 |
| CDX78909 | Canola | nucleus | 44.95 | 51.19 |
| VIT_12s0142g00360.t01 | Wine grape | nucleus | 48.08 | 50.37 |
| CDX98597 | Canola | nucleus | 43.9 | 50.2 |
| Bra012564.1-P | Field mustard | nucleus | 43.9 | 50.2 |
| Solyc07g055920.2.1 | Tomato | nucleus | 45.3 | 48.69 |
| CDY49254 | Canola | nucleus | 46.34 | 48.36 |
| PGSC0003DMT400044552 | Potato | nucleus | 42.51 | 48.03 |
| CDX89005 | Canola | nucleus | 45.64 | 47.46 |
| AT3G58780.4 | Thale cress | nucleus | 46.34 | 47.33 |
| CDY00589 | Canola | nucleus | 45.3 | 47.27 |
| Bra003356.1-P | Field mustard | nucleus | 43.9 | 46.15 |
| GSMUA_Achr10P... | Banana | nucleus | 49.48 | 44.51 |
| Zm00001d045227_P001 | Maize | nucleus | 20.91 | 44.44 |
| Zm00001d037737_P001 | Maize | nucleus | 44.6 | 41.83 |
| CDX99406 | Canola | nucleus | 44.95 | 41.35 |
| Zm00001d045231_P002 | Maize | nucleus | 32.06 | 40.89 |
| CDX67765 | Canola | nucleus | 47.74 | 39.37 |
| Zm00001d008882_P001 | Maize | nucleus | 44.95 | 39.21 |
| Zm00001d048082_P001 | Maize | nucleus | 31.36 | 35.71 |
| Zm00001d016957_P003 | Maize | nucleus | 29.62 | 35.42 |
| Zm00001d034047_P007 | Maize | nucleus | 29.62 | 35.42 |
| Zm00001d028217_P001 | Maize | nucleus | 31.01 | 34.5 |
| Zm00001d021057_P001 | Maize | nucleus | 28.92 | 33.6 |
| Zm00001d017932_P002 | Maize | nucleus | 27.53 | 33.47 |
| Zm00001d006094_P001 | Maize | nucleus | 28.92 | 33.07 |
| Zm00001d018667_P003 | Maize | nucleus | 31.01 | 32.84 |
| Zm00001d051465_P002 | Maize | nucleus | 32.75 | 32.08 |
| Zm00001d022088_P004 | Maize | nucleus | 28.22 | 31.4 |
| Zm00001d031620_P001 | Maize | nucleus | 27.18 | 30.59 |
| Zm00001d013259_P002 | Maize | nucleus | 29.27 | 30.11 |
| Zm00001d017614_P003 | Maize | nucleus | 28.57 | 29.6 |
| Zm00001d034045_P003 | Maize | nucleus | 29.62 | 29.21 |
| Zm00001d007949_P001 | Maize | nucleus | 31.01 | 29.18 |
| Zm00001d023736_P001 | Maize | nucleus | 23.34 | 26.07 |
| Zm00001d050897_P002 | Maize | nucleus | 27.53 | 25.0 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:542325 | UniProt:B4FHV7 | EMBL:BT036695 | ncoils:Coil |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like |
| ProteinID:ONM33657.1 | PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 |
| PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF357 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00017B73EA | EnsemblPlantsGene:Zm00001d041781 | EnsemblPlants:Zm00001d041781_P001 | EnsemblPlants:Zm00001d041781_T001 |
| SEG:seg | : | : | : | : | : |
Description
Zea AGAMOUS homolog2Agamous-like MADS-box protein AGL11
Coordinates
chr3:-:137903169..137908171
Molecular Weight (calculated)
32165.8 Da
IEP (calculated)
9.336
GRAVY (calculated)
-0.430
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFLLKEKEM IIAAGIASMG RGRIEIKRIE NNTSRQVTFC KRRNGLLKKA YELSVLCDAE VALIVFSSRG RLYEYANNSV KATIERYKKA HTVGSSSGPP
101: LLEHNAQQFY QQESAKLRNQ IQMLQNTNRH LVGDSVGNLS LKELKQLESR LEKGISKIRA RKSELLAAEI SYMAKRETEL QNDHMTLRTK IEEGEQQLQQ
201: VTVARSVAAA AAAATNLELN PFLEMDTKCF FTGGPFATLD MKCFLPGSLQ QMLEAQQRQM LATELNLGYQ LAPPGSDAAD NNPHHQF
101: LLEHNAQQFY QQESAKLRNQ IQMLQNTNRH LVGDSVGNLS LKELKQLESR LEKGISKIRA RKSELLAAEI SYMAKRETEL QNDHMTLRTK IEEGEQQLQQ
201: VTVARSVAAA AAAATNLELN PFLEMDTKCF FTGGPFATLD MKCFLPGSLQ QMLEAQQRQM LATELNLGYQ LAPPGSDAAD NNPHHQF
001: MEGGASNEVA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPTITEA
101: NTQYYQQEAS KLRRQIRDIQ NLNRHILGES LGSLNFKELK NLESRLEKGI SRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKITERT GLQQQESSVI
201: HQGTVYESGV TSSHQSGQYN RNYIAVNLLE PNQNSSNQDQ PPLQLV
101: NTQYYQQEAS KLRRQIRDIQ NLNRHILGES LGSLNFKELK NLESRLEKGI SRVRSKKHEM LVAEIEYMQK REIELQNDNM YLRSKITERT GLQQQESSVI
201: HQGTVYESGV TSSHQSGQYN RNYIAVNLLE PNQNSSNQDQ PPLQLV
Arabidopsis Description
SHP2K-box region and MADS-box transcription factor family protein [Source:TAIR;Acc:AT2G42830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.