Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG23502 | Sorghum | nucleus | 70.82 | 81.61 |
| KRH75125 | Soybean | nucleus | 15.18 | 63.93 |
| CDY19977 | Canola | nucleus | 21.4 | 53.92 |
| Os12t0501700-00 | Rice | nucleus | 47.47 | 52.36 |
| Zm00001d003409_P001 | Maize | nucleus | 17.12 | 50.57 |
| Bra025411.1-P | Field mustard | nucleus | 30.35 | 44.32 |
| VIT_14s0083g01030.t01 | Wine grape | nucleus | 38.13 | 39.68 |
| Zm00001d022088_P004 | Maize | nucleus | 39.69 | 39.53 |
| KRH03173 | Soybean | nucleus | 36.58 | 39.33 |
| Bra004361.1-P | Field mustard | nucleus | 28.79 | 39.15 |
| VIT_17s0000g04990.t01 | Wine grape | nucleus | 36.97 | 39.09 |
| KRH56774 | Soybean | nucleus | 36.97 | 38.93 |
| KRH54740 | Soybean | nucleus | 36.58 | 38.52 |
| VIT_01s0011g00100.t01 | Wine grape | nucleus | 35.8 | 38.17 |
| PGSC0003DMT400003485 | Potato | nucleus | 35.8 | 37.25 |
| Solyc06g069430.2.1 | Tomato | nucleus | 35.41 | 37.14 |
| Bra035952.1-P | Field mustard | nucleus | 34.63 | 36.93 |
| CDY16832 | Canola | nucleus | 34.63 | 36.93 |
| KRH63171 | Soybean | nucleus | 35.02 | 36.89 |
| KRH07467 | Soybean | nucleus | 33.85 | 36.86 |
| Solyc02g089210.2.1 | Tomato | nucleus | 35.8 | 36.8 |
| PGSC0003DMT400068325 | Potato | nucleus | 33.46 | 36.75 |
| GSMUA_Achr3P02280_001 | Banana | nucleus | 37.35 | 36.5 |
| KRG93701 | Soybean | nucleus | 34.63 | 36.48 |
| KRH45412 | Soybean | nucleus | 33.46 | 36.44 |
| Solyc03g114830.2.1 | Tomato | nucleus | 35.02 | 36.44 |
| AT5G60910.1 | Thale cress | nucleus | 34.24 | 36.36 |
| KRH45099 | Soybean | nucleus | 35.02 | 36.29 |
| CDY42841 | Canola | nucleus | 33.85 | 36.25 |
| Bra029347.1-P | Field mustard | nucleus | 33.85 | 36.25 |
| KRH18331 | Soybean | nucleus | 34.24 | 36.07 |
| PGSC0003DMT400010451 | Potato | nucleus | 35.02 | 36.0 |
| PGSC0003DMT400063313 | Potato | nucleus | 34.63 | 35.89 |
| CDY34564 | Canola | nucleus | 30.35 | 35.78 |
| CDY36077 | Canola | nucleus | 30.74 | 35.75 |
| Bra012997.1-P | Field mustard | nucleus | 33.46 | 35.68 |
| CDY58690 | Canola | nucleus | 33.46 | 35.68 |
| CDY47002 | Canola | nucleus | 33.46 | 35.68 |
| CDY02185 | Canola | nucleus | 33.46 | 35.68 |
| PGSC0003DMT400072888 | Potato | nucleus | 33.85 | 35.66 |
| Solyc02g065730.1.1 | Tomato | nucleus | 32.3 | 35.47 |
| GSMUA_Achr10P... | Banana | nucleus | 39.3 | 35.44 |
| CDY45899 | Canola | nucleus | 34.24 | 35.34 |
| AT3G30260.1 | Thale cress | nucleus | 34.24 | 35.34 |
| Solyc05g056620.1.1 | Tomato | nucleus | 33.46 | 35.25 |
| Zm00001d018667_P003 | Maize | nucleus | 36.97 | 35.06 |
| Zm00001d045227_P001 | Maize | nucleus | 18.29 | 34.81 |
| Zm00001d013259_P002 | Maize | nucleus | 37.74 | 34.77 |
| CDY00082 | Canola | nucleus | 33.46 | 34.68 |
| Bra036201.1-P | Field mustard | nucleus | 33.46 | 34.68 |
| Zm00001d034047_P007 | Maize | nucleus | 32.3 | 34.58 |
| KRH70974 | Soybean | nucleus | 32.68 | 34.57 |
| CDX86353 | Canola | nucleus | 33.46 | 34.54 |
| Zm00001d045231_P002 | Maize | nucleus | 29.96 | 34.22 |
| Zm00001d034045_P003 | Maize | nucleus | 37.35 | 32.99 |
| Zm00001d048082_P001 | Maize | nucleus | 31.91 | 32.54 |
| KRH01382 | Soybean | nucleus | 31.91 | 32.41 |
| CDX95960 | Canola | nucleus | 31.91 | 32.03 |
| Zm00001d021057_P001 | Maize | nucleus | 30.74 | 31.98 |
| Zm00001d017932_P002 | Maize | nucleus | 29.18 | 31.78 |
| AT1G69120.1 | Thale cress | nucleus | 31.52 | 31.64 |
| CDY65811 | Canola | nucleus | 31.52 | 31.64 |
| CDY33554 | Canola | nucleus | 31.52 | 31.64 |
| Bra038326.1-P | Field mustard | nucleus | 31.52 | 31.64 |
| Bra011021.1-P | Field mustard | nucleus | 31.13 | 31.5 |
| Zm00001d028217_P001 | Maize | nucleus | 31.52 | 31.4 |
| Zm00001d007949_P001 | Maize | nucleus | 36.97 | 31.15 |
| AT1G26310.1 | Thale cress | nucleus | 30.74 | 30.98 |
| Zm00001d016957_P003 | Maize | nucleus | 28.79 | 30.83 |
| Zm00001d006094_P001 | Maize | nucleus | 29.57 | 30.28 |
| Bra004007.1-P | Field mustard | nucleus | 31.52 | 29.89 |
| CDY04265 | Canola | nucleus | 31.91 | 29.6 |
| Zm00001d031620_P001 | Maize | nucleus | 29.18 | 29.41 |
| CDY07357 | Canola | nucleus | 32.3 | 28.72 |
| Zm00001d051465_P002 | Maize | nucleus | 31.52 | 27.65 |
| Zm00001d023955_P003 | Maize | nucleus | 26.07 | 25.28 |
| CDX85287 | Canola | nucleus | 18.29 | 25.13 |
| Zm00001d039434_P001 | Maize | nucleus | 25.29 | 24.81 |
| Zm00001d042591_P002 | Maize | nucleus | 25.68 | 24.63 |
| Zm00001d017614_P003 | Maize | nucleus | 26.46 | 24.55 |
| Zm00001d050897_P002 | Maize | nucleus | 29.57 | 24.05 |
| CDY35780 | Canola | nucleus | 18.29 | 23.86 |
| Zm00001d041781_P001 | Maize | nucleus | 26.07 | 23.34 |
| Zm00001d037737_P001 | Maize | nucleus | 25.68 | 21.57 |
| Zm00001d008882_P001 | Maize | nucleus | 25.29 | 19.76 |
Protein Annotations
| EntrezGene:100285996 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A1D6IV93 | ProteinID:AQK39932.1 | GO:GO:0000977 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | PFAM:PF00319 |
| PFAM:PF01486 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF241 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI0008444AAB | EnsemblPlantsGene:Zm00001d023736 | EnsemblPlants:Zm00001d023736_P001 | EnsemblPlants:Zm00001d023736_T001 | SEG:seg | : |
Description
MADS-transcription factor 34Agamous-like MADS-box protein AGL8
Coordinates
chr10:+:18031501..18037018
Molecular Weight (calculated)
28811.2 Da
IEP (calculated)
8.489
GRAVY (calculated)
-0.556
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRGKVEV RRIENSVSRQ VTFSKRRRGL AKKARELAVL CDADVALLVF SDKGRLHDFA AHGSMERILG RYERYLLCED RDDVTQDYPE ESQGNMSYDH
101: IKLRSKLEAI KKSQRNLMGE QLESLTFREV QQLEHRIDSA LRNVRSRKDH ILLNSIQELR NKASMPNKEF TLTSWSDLEV LLCSCEKEKA AVGASSSLHT
201: TTSTAAASST AAAAAALPNL NICPDDSDEP GMAAAAGIRL PWWMLQPSAV SQRQEQH
101: IKLRSKLEAI KKSQRNLMGE QLESLTFREV QQLEHRIDSA LRNVRSRKDH ILLNSIQELR NKASMPNKEF TLTSWSDLEV LLCSCEKEKA AVGASSSLHT
201: TTSTAAASST AAAAAALPNL NICPDDSDEP GMAAAAGIRL PWWMLQPSAV SQRQEQH
001: MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFSS KGKLFEYSTD SCMERILERY DRYLYSDKQL VGRDVSQSEN WVLEHAKLKA
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE
Arabidopsis Description
AGL8Agamous-like MADS-box protein AGL8 [Source:UniProtKB/Swiss-Prot;Acc:Q38876]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.