Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG28056 | Sorghum | nucleus, plastid | 93.76 | 92.96 |
| Zm00001d007295_P003 | Maize | nucleus, plastid | 90.65 | 92.13 |
| Os11t0207000-01 | Rice | nucleus, plastid | 80.75 | 82.17 |
| Os11t0207100-01 | Rice | nucleus | 80.97 | 80.71 |
| TraesCS4D01G101700.1 | Wheat | nucleus, plastid | 80.11 | 79.59 |
| TraesCS4B01G104400.2 | Wheat | nucleus, plastid | 79.78 | 79.44 |
| TraesCS4A01G211700.2 | Wheat | nucleus, plastid | 79.57 | 79.31 |
| HORVU4Hr1G017140.2 | Barley | plastid | 79.46 | 78.78 |
| TraesCS4D01G101500.1 | Wheat | nucleus, plastid | 76.77 | 78.63 |
| TraesCS4A01G211800.1 | Wheat | nucleus, plastid | 76.88 | 78.57 |
| TraesCS4B01G104300.1 | Wheat | nucleus, plastid | 76.77 | 78.29 |
| HORVU4Hr1G017160.3 | Barley | nucleus, plastid | 76.56 | 77.22 |
| Zm00001d023706_P002 | Maize | nucleus | 69.03 | 70.78 |
| Zm00001d041803_P001 | Maize | nucleus | 68.17 | 69.21 |
| CDY67669 | Canola | mitochondrion, nucleus | 14.84 | 57.98 |
| GSMUA_Achr6P18610_001 | Banana | plastid | 49.25 | 52.28 |
| VIT_18s0001g15320.t01 | Wine grape | nucleus, plastid | 50.11 | 51.04 |
| KRH64564 | Soybean | nucleus, plastid | 48.82 | 49.84 |
| Solyc06g059750.2.1 | Tomato | nucleus, plastid | 44.41 | 49.28 |
| Solyc06g059760.2.1 | Tomato | nucleus, plastid | 47.42 | 49.11 |
| KRH15928 | Soybean | nucleus, plastid | 47.74 | 48.52 |
| Bra032192.1-P | Field mustard | nucleus, plastid | 39.89 | 47.93 |
| KRH53367 | Soybean | nucleus | 49.35 | 47.76 |
| CDY14963 | Canola | nucleus, plastid | 37.85 | 47.7 |
| KRH18102 | Soybean | plastid | 47.2 | 47.31 |
| CDY40943 | Canola | nucleus, plastid | 39.03 | 46.9 |
| Bra036931.1-P | Field mustard | nucleus, plastid | 36.45 | 45.69 |
| AT1G43850.1 | Thale cress | nucleus, plastid | 41.08 | 43.56 |
| VIT_04s0044g01260.t01 | Wine grape | plastid | 40.43 | 43.12 |
| GSMUA_Achr5P25900_001 | Banana | nucleus | 38.39 | 37.19 |
| CDY70167 | Canola | cytosol, mitochondrion, nucleus | 11.18 | 36.62 |
| Zm00001d045516_P006 | Maize | nucleus, plastid | 21.61 | 25.94 |
| Zm00001d035990_P002 | Maize | plastid | 21.72 | 25.9 |
| Zm00001d018890_P006 | Maize | nucleus, plastid | 20.97 | 25.9 |
| CDY69476 | Canola | nucleus | 6.77 | 23.08 |
| PGSC0003DMT400092079 | Potato | nucleus | 17.85 | 22.46 |
Protein Annotations
| EnsemblPlants:Zm00001d049125_P002 | EnsemblPlants:Zm00001d049125_T002 | EnsemblPlantsGene:Zm00001d049125 | EntrezGene:100383819 | InterPro:LIM-bd/SEUSS | PANTHER:PTHR10378 |
| PANTHER:PTHR10378:SF17 | PFAM:PF01803 | ProteinID:AQK49639.1 | ProteinID:AQK49640.1 | ProteinID:AQK49641.1 | ProteinID:AQK49642.1 |
| SEG:seg | UniParc:UPI000221C807 | UniProt:K7TRZ5 | MapMan:35.1 | : | : |
Description
Transcriptional corepressor SEUSS
Coordinates
chr4:+:16816622..16824693
Molecular Weight (calculated)
100747.0 Da
IEP (calculated)
8.293
GRAVY (calculated)
-0.657
Length
930 amino acids
Sequence
(BLAST)
(BLAST)
001: MMPSGPPNPM GPGQPVSGAA ASLLRTSSSL LSGGGQPGMA GGGGGGMLSS QSPFSSLVSP LTQFGGNGLL GGASNVSSLL NRTTFRNGGP MPGPGSMQGG
101: GMQMSTLQQR AGLDGASDFI STGGSDPLSF PSSSQVNLVN QMGSDNLQVT SQQQQQMDAV QDMQQQQQLP MSYSQQQLPA QHSQQLQQPQ ATVKLENGGS
201: MVSIKSEQQM GQPEQNGPAQ MMRSAGCVKL EPQQLQAQMM RSLSSVKMEQ QSSDSSAFLQ QQQQQQQHHL LQLTKQIRNC PDLVSMGGPN TTANPQAAAA
301: AAAQLTLLQQ QRLLHMQQQH QQQQILKNLP LQRNQLQQQQ QHQQQQQQQQ LLRQQSLNMR TPGKSSPYEP GTCAKRLTHY MYHQQNRPQD NNIEYWRNFV
401: NEYFAPNAKK RWCVSLYGSG RQTTGVFPQD VWHCEICNRK PGRGFETTVE VLPRLCQIKY ASGTLEELLY IDMPHESQNT SGQIILDYTK AIQESVFEQL
501: RVVREGHLRI VFNPDLKIAS WEFCARRHEE LIPRRSIIPQ VSNLGAVVQK YQAAAQNSTS LSPQDMQNNC NSFVACARQL AKALEVPLVN DLGYTKRYVR
601: CLQIAEVVNC MKDLIDHSRQ TGSGPIDSLH NFPRRTPGVS TLQPQQQTEE KQAIPQSSNQ SGQNSAPMAG VQPSASANGD VTSNNSLSCA PSTSAPSPSV
701: VGLLQNSMNS RQDHPMSGTN GGPYNGGNVA IPKVNSTSSL QSNPSTSFPS PAPTTSNNSM MHAPQNTNQL SSPTTSSSIP PMQPLDTQPQ EAEPSDSQSS
801: VQKILQDLMS SCVGHSGNDT KTPNGLTHGV NGVNCLVGNA VTNNSGMGGM GFGAMNGFGH GMRTAMTNNP MAMGARMGMN HSAHDLSQLG QLHQQQQQHQ
901: QQHDIGNQLL GGFRSASSFN NIQYDWKPSQ
101: GMQMSTLQQR AGLDGASDFI STGGSDPLSF PSSSQVNLVN QMGSDNLQVT SQQQQQMDAV QDMQQQQQLP MSYSQQQLPA QHSQQLQQPQ ATVKLENGGS
201: MVSIKSEQQM GQPEQNGPAQ MMRSAGCVKL EPQQLQAQMM RSLSSVKMEQ QSSDSSAFLQ QQQQQQQHHL LQLTKQIRNC PDLVSMGGPN TTANPQAAAA
301: AAAQLTLLQQ QRLLHMQQQH QQQQILKNLP LQRNQLQQQQ QHQQQQQQQQ LLRQQSLNMR TPGKSSPYEP GTCAKRLTHY MYHQQNRPQD NNIEYWRNFV
401: NEYFAPNAKK RWCVSLYGSG RQTTGVFPQD VWHCEICNRK PGRGFETTVE VLPRLCQIKY ASGTLEELLY IDMPHESQNT SGQIILDYTK AIQESVFEQL
501: RVVREGHLRI VFNPDLKIAS WEFCARRHEE LIPRRSIIPQ VSNLGAVVQK YQAAAQNSTS LSPQDMQNNC NSFVACARQL AKALEVPLVN DLGYTKRYVR
601: CLQIAEVVNC MKDLIDHSRQ TGSGPIDSLH NFPRRTPGVS TLQPQQQTEE KQAIPQSSNQ SGQNSAPMAG VQPSASANGD VTSNNSLSCA PSTSAPSPSV
701: VGLLQNSMNS RQDHPMSGTN GGPYNGGNVA IPKVNSTSSL QSNPSTSFPS PAPTTSNNSM MHAPQNTNQL SSPTTSSSIP PMQPLDTQPQ EAEPSDSQSS
801: VQKILQDLMS SCVGHSGNDT KTPNGLTHGV NGVNCLVGNA VTNNSGMGGM GFGAMNGFGH GMRTAMTNNP MAMGARMGMN HSAHDLSQLG QLHQQQQQHQ
901: QQHDIGNQLL GGFRSASSFN NIQYDWKPSQ
001: MVPSEPPNPV GGGENVPPSI LGGQGGAPLP SQPAFPSLVS PRTQFGNNMS MSMLGNAPNI SSLLNNQSFV NGIPGSMISM DTSGAESDPM SNVGFSGLSS
101: FNASSMVSPR SSGQVQGQQF SNVSANQLLA EQQRNKKMET QSFQHGQQQS MQQQFSTVRG GGLAGVGPVK MEPGQVSNDQ QHGQVQQQQQ KMLRNLGSVK
201: LEPQQIQAMR NLAQVKMEPQ HSEQSLFLQQ QQRQQQQQQQ QQFLQMPGQS PQAQMNIFQQ QRLMQLQQQQ LLKSMPQQRP QLPQQFQQQN LPLRPPLKPV
301: YEPGMGAQRL TQYMYRQQHR PEDNNIEFWR KFVAEYFAPN AKKRWCVSMY GSGRQTTGVF PQDVWHCEIC NRKPGRGFEA TAEVLPRLFK IKYESGTLEE
401: LLYVDMPRES QNSSGQIVLE YAKATQESVF EHLRVVRDGQ LRIVFSPDLK IFSWEFCARR HEELIPRRLL IPQVSQLGSA AQKYQQAAQN ATTDSALPEL
501: QNNCNMFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSRETRTGPI ESLAKFPRRT GPSSALPGPS PQQASDQLRQ QQQQQQQQQQ
601: QQQQQQQQQQ QQQTVSQNTN SDQSSRQVAL MQGNPSNGVN YAFNAASAST STSSIAGLIH QNSMKGRHQN AAYNPPNSPY GGNSVQMQSP SSSGTMVPSS
701: SQQQHNLPTF QSPTSSSNNN NPSQNGIPSV NHMGSTNSPA MQQAGEVDGN ESSSVQKILN EILMNNQAHN NSSGGSMVGH GSFGNDGKGQ ANVNSSGVLL
801: MNGQVNNNNN TNIGGAGGFG GGIGQSMAAN GINNINGNNS LMNGRVGMMV RDPNGQQDLG NQLLGAVNGF NNFDWNA
101: FNASSMVSPR SSGQVQGQQF SNVSANQLLA EQQRNKKMET QSFQHGQQQS MQQQFSTVRG GGLAGVGPVK MEPGQVSNDQ QHGQVQQQQQ KMLRNLGSVK
201: LEPQQIQAMR NLAQVKMEPQ HSEQSLFLQQ QQRQQQQQQQ QQFLQMPGQS PQAQMNIFQQ QRLMQLQQQQ LLKSMPQQRP QLPQQFQQQN LPLRPPLKPV
301: YEPGMGAQRL TQYMYRQQHR PEDNNIEFWR KFVAEYFAPN AKKRWCVSMY GSGRQTTGVF PQDVWHCEIC NRKPGRGFEA TAEVLPRLFK IKYESGTLEE
401: LLYVDMPRES QNSSGQIVLE YAKATQESVF EHLRVVRDGQ LRIVFSPDLK IFSWEFCARR HEELIPRRLL IPQVSQLGSA AQKYQQAAQN ATTDSALPEL
501: QNNCNMFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSRETRTGPI ESLAKFPRRT GPSSALPGPS PQQASDQLRQ QQQQQQQQQQ
601: QQQQQQQQQQ QQQTVSQNTN SDQSSRQVAL MQGNPSNGVN YAFNAASAST STSSIAGLIH QNSMKGRHQN AAYNPPNSPY GGNSVQMQSP SSSGTMVPSS
701: SQQQHNLPTF QSPTSSSNNN NPSQNGIPSV NHMGSTNSPA MQQAGEVDGN ESSSVQKILN EILMNNQAHN NSSGGSMVGH GSFGNDGKGQ ANVNSSGVLL
801: MNGQVNNNNN TNIGGAGGFG GGIGQSMAAN GINNINGNNS LMNGRVGMMV RDPNGQQDLG NQLLGAVNGF NNFDWNA
Arabidopsis Description
SEUTranscriptional corepressor SEUSS [Source:UniProtKB/Swiss-Prot;Acc:Q8W234]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.