Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G104400.2 | Wheat | nucleus, plastid | 99.15 | 99.36 |
| TraesCS4A01G211700.2 | Wheat | nucleus, plastid | 98.61 | 98.93 |
| HORVU4Hr1G017140.2 | Barley | plastid | 94.98 | 94.78 |
| TraesCS4D01G101500.1 | Wheat | nucleus, plastid | 85.15 | 87.78 |
| Os11t0207000-01 | Rice | nucleus, plastid | 81.73 | 83.7 |
| Os11t0207100-01 | Rice | nucleus | 83.01 | 83.28 |
| Zm00001d049125_P002 | Maize | nucleus, plastid | 79.59 | 80.11 |
| KXG28056 | Sorghum | nucleus, plastid | 80.13 | 79.96 |
| Zm00001d007295_P003 | Maize | nucleus, plastid | 76.92 | 78.69 |
| CDY67669 | Canola | mitochondrion, nucleus | 14.53 | 57.14 |
| GSMUA_Achr6P18610_001 | Banana | plastid | 50.0 | 53.42 |
| VIT_18s0001g15320.t01 | Wine grape | nucleus, plastid | 50.11 | 51.37 |
| KRH64564 | Soybean | nucleus, plastid | 49.68 | 51.04 |
| Solyc06g059750.2.1 | Tomato | nucleus, plastid | 44.44 | 49.64 |
| KRH15928 | Soybean | nucleus, plastid | 48.5 | 49.62 |
| Solyc06g059760.2.1 | Tomato | nucleus, plastid | 47.54 | 49.55 |
| KRH53367 | Soybean | nucleus | 50.0 | 48.7 |
| KRH18102 | Soybean | plastid | 48.18 | 48.6 |
| CDY14963 | Canola | nucleus, plastid | 37.71 | 47.83 |
| Bra032192.1-P | Field mustard | nucleus, plastid | 38.25 | 46.25 |
| CDY40943 | Canola | nucleus, plastid | 38.25 | 46.25 |
| Bra036931.1-P | Field mustard | nucleus, plastid | 36.0 | 45.42 |
| VIT_04s0044g01260.t01 | Wine grape | plastid | 41.03 | 44.04 |
| AT1G43850.1 | Thale cress | nucleus, plastid | 41.03 | 43.79 |
| CDY70167 | Canola | cytosol, mitochondrion, nucleus | 11.43 | 37.68 |
| GSMUA_Achr5P25900_001 | Banana | nucleus | 37.71 | 36.77 |
| CDY69476 | Canola | nucleus | 7.59 | 26.01 |
| TraesCS7D01G510400.2 | Wheat | nucleus | 21.69 | 23.36 |
| TraesCS7D01G146100.2 | Wheat | nucleus, plastid | 20.83 | 23.16 |
| TraesCS7D01G050000.5 | Wheat | nucleus, plastid | 20.73 | 22.64 |
| PGSC0003DMT400092079 | Potato | nucleus | 17.73 | 22.46 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G101700.1 | EnsemblPlantsGene:TraesCS4D01G101700 | InterPro:LIM-bd/SEUSS | ncoils:Coil | PANTHER:PTHR10378 | PANTHER:PTHR10378:SF17 |
| PFAM:PF01803 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4D:+:79700920..79708221
Molecular Weight (calculated)
101596.0 Da
IEP (calculated)
8.643
GRAVY (calculated)
-0.709
Length
936 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSGPPNPM GPGQPAGGAS LLRTSSSLLS GGQQGMGGGG GMLQSQSPFS SLVSPRSQFG GNGLLGATSN VSSLLNRSSF GNGSPVPSPG QMPNGGLPMN
101: TLQQRGGLDG AGDFTGTGGS DPMSFPSSSS QVSLGNHLGS DILQQQQQQM DVRDLQHQQE QQHQQHQLPM SYNQQQLPSQ QSQPQAAVKL ENGGSIGGVK
201: LEQQMGLPDQ NGPAQMMRNA GNVKFESQQL QGLRGLGAVK MEQSSSDPSA FLQQQQQQQQ HHHHLLQLTK QNPQAAAAAQ LNLLQQQRLL HMQQQHQQQH
301: QQILKNLPLQ RNQLQQQQQQ QQQQQQQQQQ QQLLRQQSLN MRTPGKLAPY EPGTCAKRLT HYMYHQQNRP QDNNIEYWRN FVNEYFAPTA KKRWCVSLYG
401: SGRQTTGVFP QDVWHCEICN RKPGRGFETT VEVLPRLCQI KYASGTLEEL LYIDMPRESQ NASGQIILDY AKAIQESVFD QLRVVREGHL RIVFNPDLKI
501: ASWEFCARRH EELIPRRSII PQVSQLGTVV QKYQAAAQSS TSLTTQDMQN NCNSFVACAR QLAKALEVPL VNDLGYTKRY VRCLQIAEVV NCMKDLIDYS
601: RQTGSGPINS LHNFPRRSPS GINPLQPQQQ APEEQQSVPQ SSNQSGQNSA PMAGVQASAS ANADVTSNNS LTCAPSTSAP SPSVVGLLQG SVNSRQDHPM
701: GTVNGLYNSG DDGVIPKVNS TSSLQSNPSP SFSSQVPTSS NNNMMPAPQN TNQLSSPAVS SSNLPPMQPP ATRAQEPEPS DSQSSVQRIL QEMMSSQMNG
801: VGHGANDMKR PNGLAPGING VNCLVGNAVT NHSGVGGMGF GAMGGFGSNS AASGLRMAMA NNAMANSAMA MNGRMGMGMH HSAHDLSQLG QQQQQQQNQH
901: QHQQHQQQHD IGNQLLGGLR AANSFNNLQY DWKPSQ
101: TLQQRGGLDG AGDFTGTGGS DPMSFPSSSS QVSLGNHLGS DILQQQQQQM DVRDLQHQQE QQHQQHQLPM SYNQQQLPSQ QSQPQAAVKL ENGGSIGGVK
201: LEQQMGLPDQ NGPAQMMRNA GNVKFESQQL QGLRGLGAVK MEQSSSDPSA FLQQQQQQQQ HHHHLLQLTK QNPQAAAAAQ LNLLQQQRLL HMQQQHQQQH
301: QQILKNLPLQ RNQLQQQQQQ QQQQQQQQQQ QQLLRQQSLN MRTPGKLAPY EPGTCAKRLT HYMYHQQNRP QDNNIEYWRN FVNEYFAPTA KKRWCVSLYG
401: SGRQTTGVFP QDVWHCEICN RKPGRGFETT VEVLPRLCQI KYASGTLEEL LYIDMPRESQ NASGQIILDY AKAIQESVFD QLRVVREGHL RIVFNPDLKI
501: ASWEFCARRH EELIPRRSII PQVSQLGTVV QKYQAAAQSS TSLTTQDMQN NCNSFVACAR QLAKALEVPL VNDLGYTKRY VRCLQIAEVV NCMKDLIDYS
601: RQTGSGPINS LHNFPRRSPS GINPLQPQQQ APEEQQSVPQ SSNQSGQNSA PMAGVQASAS ANADVTSNNS LTCAPSTSAP SPSVVGLLQG SVNSRQDHPM
701: GTVNGLYNSG DDGVIPKVNS TSSLQSNPSP SFSSQVPTSS NNNMMPAPQN TNQLSSPAVS SSNLPPMQPP ATRAQEPEPS DSQSSVQRIL QEMMSSQMNG
801: VGHGANDMKR PNGLAPGING VNCLVGNAVT NHSGVGGMGF GAMGGFGSNS AASGLRMAMA NNAMANSAMA MNGRMGMGMH HSAHDLSQLG QQQQQQQNQH
901: QHQQHQQQHD IGNQLLGGLR AANSFNNLQY DWKPSQ
001: MVPSEPPNPV GGGENVPPSI LGGQGGAPLP SQPAFPSLVS PRTQFGNNMS MSMLGNAPNI SSLLNNQSFV NGIPGSMISM DTSGAESDPM SNVGFSGLSS
101: FNASSMVSPR SSGQVQGQQF SNVSANQLLA EQQRNKKMET QSFQHGQQQS MQQQFSTVRG GGLAGVGPVK MEPGQVSNDQ QHGQVQQQQQ KMLRNLGSVK
201: LEPQQIQAMR NLAQVKMEPQ HSEQSLFLQQ QQRQQQQQQQ QQFLQMPGQS PQAQMNIFQQ QRLMQLQQQQ LLKSMPQQRP QLPQQFQQQN LPLRPPLKPV
301: YEPGMGAQRL TQYMYRQQHR PEDNNIEFWR KFVAEYFAPN AKKRWCVSMY GSGRQTTGVF PQDVWHCEIC NRKPGRGFEA TAEVLPRLFK IKYESGTLEE
401: LLYVDMPRES QNSSGQIVLE YAKATQESVF EHLRVVRDGQ LRIVFSPDLK IFSWEFCARR HEELIPRRLL IPQVSQLGSA AQKYQQAAQN ATTDSALPEL
501: QNNCNMFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSRETRTGPI ESLAKFPRRT GPSSALPGPS PQQASDQLRQ QQQQQQQQQQ
601: QQQQQQQQQQ QQQTVSQNTN SDQSSRQVAL MQGNPSNGVN YAFNAASAST STSSIAGLIH QNSMKGRHQN AAYNPPNSPY GGNSVQMQSP SSSGTMVPSS
701: SQQQHNLPTF QSPTSSSNNN NPSQNGIPSV NHMGSTNSPA MQQAGEVDGN ESSSVQKILN EILMNNQAHN NSSGGSMVGH GSFGNDGKGQ ANVNSSGVLL
801: MNGQVNNNNN TNIGGAGGFG GGIGQSMAAN GINNINGNNS LMNGRVGMMV RDPNGQQDLG NQLLGAVNGF NNFDWNA
101: FNASSMVSPR SSGQVQGQQF SNVSANQLLA EQQRNKKMET QSFQHGQQQS MQQQFSTVRG GGLAGVGPVK MEPGQVSNDQ QHGQVQQQQQ KMLRNLGSVK
201: LEPQQIQAMR NLAQVKMEPQ HSEQSLFLQQ QQRQQQQQQQ QQFLQMPGQS PQAQMNIFQQ QRLMQLQQQQ LLKSMPQQRP QLPQQFQQQN LPLRPPLKPV
301: YEPGMGAQRL TQYMYRQQHR PEDNNIEFWR KFVAEYFAPN AKKRWCVSMY GSGRQTTGVF PQDVWHCEIC NRKPGRGFEA TAEVLPRLFK IKYESGTLEE
401: LLYVDMPRES QNSSGQIVLE YAKATQESVF EHLRVVRDGQ LRIVFSPDLK IFSWEFCARR HEELIPRRLL IPQVSQLGSA AQKYQQAAQN ATTDSALPEL
501: QNNCNMFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSRETRTGPI ESLAKFPRRT GPSSALPGPS PQQASDQLRQ QQQQQQQQQQ
601: QQQQQQQQQQ QQQTVSQNTN SDQSSRQVAL MQGNPSNGVN YAFNAASAST STSSIAGLIH QNSMKGRHQN AAYNPPNSPY GGNSVQMQSP SSSGTMVPSS
701: SQQQHNLPTF QSPTSSSNNN NPSQNGIPSV NHMGSTNSPA MQQAGEVDGN ESSSVQKILN EILMNNQAHN NSSGGSMVGH GSFGNDGKGQ ANVNSSGVLL
801: MNGQVNNNNN TNIGGAGGFG GGIGQSMAAN GINNINGNNS LMNGRVGMMV RDPNGQQDLG NQLLGAVNGF NNFDWNA
Arabidopsis Description
SEUTranscriptional corepressor SEUSS [Source:UniProtKB/Swiss-Prot;Acc:Q8W234]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.