Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 4
- cytosol 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G43850.1 | KRH07467 | AT1G69120.1 | 16854969 |
| AT1G43850.1 | KRH45412 | AT1G69120.1 | 16854969 |
| AT1G43850.1 | KRH70974 | AT1G69120.1 | 16854969 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53367 | Soybean | nucleus | 96.82 | 91.78 |
| KRH15928 | Soybean | nucleus, plastid | 82.55 | 82.19 |
| VIT_18s0001g15320.t01 | Wine grape | nucleus, plastid | 79.14 | 78.97 |
| KRH18102 | Soybean | plastid | 72.78 | 71.44 |
| Solyc06g059760.2.1 | Tomato | nucleus, plastid | 68.06 | 69.04 |
| CDY67669 | Canola | mitochondrion, nucleus | 17.89 | 68.49 |
| Solyc06g059750.2.1 | Tomato | nucleus, plastid | 57.3 | 62.29 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 54.23 | 56.2 |
| CDY40943 | Canola | nucleus, plastid | 47.31 | 55.68 |
| Bra032192.1-P | Field mustard | nucleus, plastid | 46.54 | 54.78 |
| GSMUA_Achr2P20700_001 | Banana | plastid | 50.71 | 53.91 |
| CDY14963 | Canola | nucleus, plastid | 43.36 | 53.52 |
| Bra036931.1-P | Field mustard | nucleus, plastid | 43.36 | 53.23 |
| GSMUA_Achr6P18610_001 | Banana | plastid | 51.04 | 53.08 |
| AT1G43850.1 | Thale cress | nucleus, plastid | 51.04 | 53.02 |
| GSMUA_Achr3P02850_001 | Banana | nucleus | 51.15 | 52.01 |
| TraesCS4D01G101500.1 | Wheat | nucleus, plastid | 50.71 | 50.88 |
| TraesCS4A01G211800.1 | Wheat | nucleus, plastid | 50.71 | 50.77 |
| Os11t0207000-01 | Rice | nucleus, plastid | 50.93 | 50.77 |
| Os11t0207100-01 | Rice | nucleus | 51.37 | 50.16 |
| TraesCS4B01G104300.1 | Wheat | nucleus, plastid | 50.16 | 50.11 |
| HORVU4Hr1G017160.3 | Barley | nucleus, plastid | 50.6 | 50.0 |
| TraesCS4B01G104400.2 | Wheat | nucleus, plastid | 51.26 | 50.0 |
| TraesCS4A01G211700.2 | Wheat | nucleus, plastid | 51.04 | 49.84 |
| HORVU4Hr1G017140.2 | Barley | plastid | 51.15 | 49.68 |
| TraesCS4D01G101700.1 | Wheat | nucleus, plastid | 51.04 | 49.68 |
| Zm00001d007295_P003 | Maize | nucleus, plastid | 49.51 | 49.29 |
| Zm00001d023706_P002 | Maize | nucleus | 48.85 | 49.06 |
| KXG23150 | Sorghum | nucleus | 49.73 | 48.87 |
| KXG28056 | Sorghum | nucleus, plastid | 50.27 | 48.83 |
| Zm00001d049125_P002 | Maize | nucleus, plastid | 49.84 | 48.82 |
| Zm00001d041803_P001 | Maize | nucleus | 48.19 | 47.93 |
| CDY70167 | Canola | cytosol, mitochondrion, nucleus | 13.28 | 42.61 |
| KRG88471 | Soybean | nucleus, plastid | 18.33 | 39.02 |
| GSMUA_Achr5P25900_001 | Banana | nucleus | 38.64 | 36.67 |
| KRH38603 | Soybean | plastid | 18.99 | 32.58 |
| KRH38604 | Soybean | nucleus | 27.99 | 31.56 |
| KRH09131 | Soybean | nucleus, plastid | 29.31 | 30.73 |
| KRH09132 | Soybean | plastid | 29.31 | 30.38 |
| CDY69476 | Canola | nucleus | 7.14 | 23.81 |
| PGSC0003DMT400092079 | Potato | nucleus | 18.33 | 22.6 |
Protein Annotations
| EMBL:ACUP02002768 | EnsemblPlants:KRH64564 | EnsemblPlantsGene:GLYMA_04G241900 | EntrezGene:100787573 | InterPro:LIM-bd/SEUSS | PANTHER:PTHR10378 |
| PANTHER:PTHR10378:SF17 | PFAM:PF01803 | ProteinID:KRH64564 | ProteinID:KRH64564.1 | ProteinID:KRH64565.1 | SEG:seg |
| UniParc:UPI000233A20E | UniProt:I1JYY1 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:50985622..50995714
Molecular Weight (calculated)
99228.0 Da
IEP (calculated)
9.109
GRAVY (calculated)
-0.646
Length
911 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPPGPPTPI GGAQSVSPSL LRSNSGMLGA QGGPMPPQSS FPSLVSPRTQ FNNMNILGNM SNVTSILNQS FPNGVPNPGL SGPGNSQRGA IDTGAEKDPV
101: SSVGNGMNFN NSSSTFVQSS IVNAASSGQG QGQQFSNPSS NQLLQDQQHS QQLEPQNFQH GQQSMQQFSA PLNTQQPPQP QQHFQSIRGG MGGMGPVKLE
201: QVSNDQLGQQ QQQQLQSLRN LASVKLEPQQ MQTMRTLGPV KMEPQHSDQP LFMQQQQQQQ QQQQFLHMSN QSSQAAAAQI NLLRHHRLLQ LQQQHQQQQL
301: LKAMPQQRSQ LPQQFQQQNM PMRSPVKPAY EPGMCARRLT HYMYQQQHRP EDNNIDFWRK FVAEYFAPNA KKKWCVSMYG SGRQTTGVFP QDVWHCEICN
401: RKPGRGFEAT VEVLPRLFKI KYESGTLEEL LYVDMPREYH NSSGQIVLDY AKAIQESVFE QLRVVRDGQL RIVFSPDLKI CSWEFCARRH EELIPRRLLI
501: PQVSQLGTVA QKYQSFTQNA TPNVSVPELQ NNCNMFVASA RQLAKALEVP LVNDLGYTKR YVRCLQISEV VNSMKDLIDY SRETGTGPME SLAKFPRRTS
601: GSSGPRGQAQ QHEEQLQQQQ QQQMVAHNSN GDQNSVQAAA MQIASSNGMV SVNNTVNPAS TLTSTSTIVG LLHQNSMNSR QPNSMNNASS PYGGSSVQIP
701: SPGSSSTVPQ AQPNSSPFQS PTPSSSNNPP QTSHPALTSA NHMSTTNSPA NISMQQQQPS ISGEPDPSDA QSSVQKIIHE MMMSSQINGN GGMVGVGSLG
801: NDVKNVNGIL PVSANTGLNG GNGLVGNGTM NSNSGVGVGN YGTMGLGQSA MPNGIRSAMV NNSIMNGRGG MASLARDQAM NHQQDMSNQL LSGLGAVGGF
901: SNLQFDWKPS P
101: SSVGNGMNFN NSSSTFVQSS IVNAASSGQG QGQQFSNPSS NQLLQDQQHS QQLEPQNFQH GQQSMQQFSA PLNTQQPPQP QQHFQSIRGG MGGMGPVKLE
201: QVSNDQLGQQ QQQQLQSLRN LASVKLEPQQ MQTMRTLGPV KMEPQHSDQP LFMQQQQQQQ QQQQFLHMSN QSSQAAAAQI NLLRHHRLLQ LQQQHQQQQL
301: LKAMPQQRSQ LPQQFQQQNM PMRSPVKPAY EPGMCARRLT HYMYQQQHRP EDNNIDFWRK FVAEYFAPNA KKKWCVSMYG SGRQTTGVFP QDVWHCEICN
401: RKPGRGFEAT VEVLPRLFKI KYESGTLEEL LYVDMPREYH NSSGQIVLDY AKAIQESVFE QLRVVRDGQL RIVFSPDLKI CSWEFCARRH EELIPRRLLI
501: PQVSQLGTVA QKYQSFTQNA TPNVSVPELQ NNCNMFVASA RQLAKALEVP LVNDLGYTKR YVRCLQISEV VNSMKDLIDY SRETGTGPME SLAKFPRRTS
601: GSSGPRGQAQ QHEEQLQQQQ QQQMVAHNSN GDQNSVQAAA MQIASSNGMV SVNNTVNPAS TLTSTSTIVG LLHQNSMNSR QPNSMNNASS PYGGSSVQIP
701: SPGSSSTVPQ AQPNSSPFQS PTPSSSNNPP QTSHPALTSA NHMSTTNSPA NISMQQQQPS ISGEPDPSDA QSSVQKIIHE MMMSSQINGN GGMVGVGSLG
801: NDVKNVNGIL PVSANTGLNG GNGLVGNGTM NSNSGVGVGN YGTMGLGQSA MPNGIRSAMV NNSIMNGRGG MASLARDQAM NHQQDMSNQL LSGLGAVGGF
901: SNLQFDWKPS P
001: MVPSEPPNPV GGGENVPPSI LGGQGGAPLP SQPAFPSLVS PRTQFGNNMS MSMLGNAPNI SSLLNNQSFV NGIPGSMISM DTSGAESDPM SNVGFSGLSS
101: FNASSMVSPR SSGQVQGQQF SNVSANQLLA EQQRNKKMET QSFQHGQQQS MQQQFSTVRG GGLAGVGPVK MEPGQVSNDQ QHGQVQQQQQ KMLRNLGSVK
201: LEPQQIQAMR NLAQVKMEPQ HSEQSLFLQQ QQRQQQQQQQ QQFLQMPGQS PQAQMNIFQQ QRLMQLQQQQ LLKSMPQQRP QLPQQFQQQN LPLRPPLKPV
301: YEPGMGAQRL TQYMYRQQHR PEDNNIEFWR KFVAEYFAPN AKKRWCVSMY GSGRQTTGVF PQDVWHCEIC NRKPGRGFEA TAEVLPRLFK IKYESGTLEE
401: LLYVDMPRES QNSSGQIVLE YAKATQESVF EHLRVVRDGQ LRIVFSPDLK IFSWEFCARR HEELIPRRLL IPQVSQLGSA AQKYQQAAQN ATTDSALPEL
501: QNNCNMFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSRETRTGPI ESLAKFPRRT GPSSALPGPS PQQASDQLRQ QQQQQQQQQQ
601: QQQQQQQQQQ QQQTVSQNTN SDQSSRQVAL MQGNPSNGVN YAFNAASAST STSSIAGLIH QNSMKGRHQN AAYNPPNSPY GGNSVQMQSP SSSGTMVPSS
701: SQQQHNLPTF QSPTSSSNNN NPSQNGIPSV NHMGSTNSPA MQQAGEVDGN ESSSVQKILN EILMNNQAHN NSSGGSMVGH GSFGNDGKGQ ANVNSSGVLL
801: MNGQVNNNNN TNIGGAGGFG GGIGQSMAAN GINNINGNNS LMNGRVGMMV RDPNGQQDLG NQLLGAVNGF NNFDWNA
101: FNASSMVSPR SSGQVQGQQF SNVSANQLLA EQQRNKKMET QSFQHGQQQS MQQQFSTVRG GGLAGVGPVK MEPGQVSNDQ QHGQVQQQQQ KMLRNLGSVK
201: LEPQQIQAMR NLAQVKMEPQ HSEQSLFLQQ QQRQQQQQQQ QQFLQMPGQS PQAQMNIFQQ QRLMQLQQQQ LLKSMPQQRP QLPQQFQQQN LPLRPPLKPV
301: YEPGMGAQRL TQYMYRQQHR PEDNNIEFWR KFVAEYFAPN AKKRWCVSMY GSGRQTTGVF PQDVWHCEIC NRKPGRGFEA TAEVLPRLFK IKYESGTLEE
401: LLYVDMPRES QNSSGQIVLE YAKATQESVF EHLRVVRDGQ LRIVFSPDLK IFSWEFCARR HEELIPRRLL IPQVSQLGSA AQKYQQAAQN ATTDSALPEL
501: QNNCNMFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSRETRTGPI ESLAKFPRRT GPSSALPGPS PQQASDQLRQ QQQQQQQQQQ
601: QQQQQQQQQQ QQQTVSQNTN SDQSSRQVAL MQGNPSNGVN YAFNAASAST STSSIAGLIH QNSMKGRHQN AAYNPPNSPY GGNSVQMQSP SSSGTMVPSS
701: SQQQHNLPTF QSPTSSSNNN NPSQNGIPSV NHMGSTNSPA MQQAGEVDGN ESSSVQKILN EILMNNQAHN NSSGGSMVGH GSFGNDGKGQ ANVNSSGVLL
801: MNGQVNNNNN TNIGGAGGFG GGIGQSMAAN GINNINGNNS LMNGRVGMMV RDPNGQQDLG NQLLGAVNGF NNFDWNA
Arabidopsis Description
SEUTranscriptional corepressor SEUSS [Source:UniProtKB/Swiss-Prot;Acc:Q8W234]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.