Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr2P20700_001 | Banana | plastid | 66.44 | 68.14 |
GSMUA_Achr3P02850_001 | Banana | nucleus | 66.67 | 65.4 |
CDY67669 | Canola | mitochondrion, nucleus | 17.29 | 63.87 |
GSMUA_Achr6P18610_001 | Banana | plastid | 55.97 | 56.16 |
VIT_18s0001g15320.t01 | Wine grape | nucleus, plastid | 57.91 | 55.75 |
KRH64564 | Soybean | nucleus, plastid | 56.2 | 54.23 |
KRH18102 | Soybean | plastid | 55.52 | 52.59 |
KRH15928 | Soybean | nucleus, plastid | 54.61 | 52.46 |
KRH53367 | Soybean | nucleus | 56.31 | 51.51 |
Solyc06g059750.2.1 | Tomato | nucleus, plastid | 48.58 | 50.95 |
Solyc06g059760.2.1 | Tomato | nucleus, plastid | 51.99 | 50.89 |
CDY40943 | Canola | nucleus, plastid | 43.8 | 49.74 |
CDY14963 | Canola | nucleus, plastid | 41.3 | 49.19 |
Bra036931.1-P | Field mustard | nucleus, plastid | 41.3 | 48.92 |
Bra032192.1-P | Field mustard | nucleus, plastid | 41.98 | 47.67 |
VIT_04s0044g01260.t01 | Wine grape | plastid | 46.87 | 47.25 |
AT1G43850.1 | Thale cress | nucleus, plastid | 46.42 | 46.52 |
GSMUA_Achr5P25900_001 | Banana | nucleus | 42.32 | 38.75 |
CDY70167 | Canola | cytosol, mitochondrion, nucleus | 12.17 | 37.68 |
GSMUA_Achr10P... | Banana | nucleus | 25.6 | 29.03 |
GSMUA_Achr1P07930_001 | Banana | nucleus | 26.05 | 28.84 |
GSMUA_Achr1P16220_001 | Banana | nucleus | 22.87 | 28.76 |
GSMUA_Achr2P03310_001 | Banana | nucleus | 24.91 | 27.14 |
GSMUA_Achr7P05870_001 | Banana | nucleus | 8.19 | 25.17 |
CDY69476 | Canola | nucleus | 7.51 | 24.18 |
PGSC0003DMT400092079 | Potato | nucleus | 17.63 | 20.97 |
Protein Annotations
EnsemblPlants:GSMUA_Achr10P16120_001 | EnsemblPlants:GSMUA_Achr10T16120_001 | EnsemblPlantsGene:GSMUA_Achr10G16120_001 | InterPro:LIM-bd/SEUSS | ncoils:Coil | PANTHER:PTHR10378 |
PANTHER:PTHR10378:SF17 | PFAM:PF01803 | SEG:seg | UniParc:UPI0002969B60 | UniProt:M0RIN7 | MapMan:35.1 |
Description
Transcriptional corepressor SEUSS [Source:GMGC_GENE;Acc:GSMUA_Achr10G16120_001]
Coordinates
chr10:-:23773099..23780420
Molecular Weight (calculated)
95416.3 Da
IEP (calculated)
8.537
GRAVY (calculated)
-0.544
Length
879 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPSGSSTPI GGAQSVTPSL LRSNSGLLGG SQPGLIPSPP PFSSLVSPRT QYSNSGSLLG NMSNVPPLNN SYGNGGPVGG LSGSPMNLQQ HGSLVGVADM
101: VGSAEPNPLL FTSSSGQSQG QQQCFQNPSS SQHGPDQPQS QIDAMQNLQQ QFSVPQSQQL PLRGGLGSAG RLGPVKLEPQ MGPSDQISPP QQLQTLHSIG
201: MVKVDPQQLQ SFRSLGPVKM ESHHSDPSLF LQQQQQQQQQ QQQQQILQLS RQNSQAAAAQ MSLLQQQRML QFQQQQQQQQ IVKTLPQQRG QLRQQQLLQH
301: NLPVRPPMRS TVYEPGMCAR RLTQYMYHQQ HRPQDNNIEF WRKFIAEYFA PSAKKRWCVS LYGSGRQTTG VLPQDVWHCE ICNHKPGRGF ETTVEVLPRL
401: FQIKYASGTL EELLYVDMPR EYQNASGQIV LDYAKAIQES VFEQLRVVRD GQLRIVFNPD LKISSWEFCA RRHEELIPRR VIIPQVSQLG AMVQRYQAAA
501: QNASLPTQDL QNTCNSFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSKETRSGPI DSLNNFPRRT SCSSGLQTQQ PQQPEQQQPI
601: TQNPNHNDQN SAHATGIQLS AGSSNVVSIN NSLNAASSTS TSAATIIGLL HQNSINTRQE NQMNTVNSPY GGGNAVQIPS ASSSNTLAPS QPNPPSPFSS
701: LAPASNNNPT TTSHNAAHLS SINSPASLST MQQPASQVHE TDPNDSQSSV HQILHELMMS SQLNGVNSLG NDMKPINGIT PALSVENCLV GHGLSNNSAI
801: SGAGFSGMGG IGLSAAASGM RPGGTNNVMA MNGRVGASHL SQDPTATSHQ QQDIGNRLLE RIGAVNSFNN LQFDWKSFP
101: VGSAEPNPLL FTSSSGQSQG QQQCFQNPSS SQHGPDQPQS QIDAMQNLQQ QFSVPQSQQL PLRGGLGSAG RLGPVKLEPQ MGPSDQISPP QQLQTLHSIG
201: MVKVDPQQLQ SFRSLGPVKM ESHHSDPSLF LQQQQQQQQQ QQQQQILQLS RQNSQAAAAQ MSLLQQQRML QFQQQQQQQQ IVKTLPQQRG QLRQQQLLQH
301: NLPVRPPMRS TVYEPGMCAR RLTQYMYHQQ HRPQDNNIEF WRKFIAEYFA PSAKKRWCVS LYGSGRQTTG VLPQDVWHCE ICNHKPGRGF ETTVEVLPRL
401: FQIKYASGTL EELLYVDMPR EYQNASGQIV LDYAKAIQES VFEQLRVVRD GQLRIVFNPD LKISSWEFCA RRHEELIPRR VIIPQVSQLG AMVQRYQAAA
501: QNASLPTQDL QNTCNSFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSKETRSGPI DSLNNFPRRT SCSSGLQTQQ PQQPEQQQPI
601: TQNPNHNDQN SAHATGIQLS AGSSNVVSIN NSLNAASSTS TSAATIIGLL HQNSINTRQE NQMNTVNSPY GGGNAVQIPS ASSSNTLAPS QPNPPSPFSS
701: LAPASNNNPT TTSHNAAHLS SINSPASLST MQQPASQVHE TDPNDSQSSV HQILHELMMS SQLNGVNSLG NDMKPINGIT PALSVENCLV GHGLSNNSAI
801: SGAGFSGMGG IGLSAAASGM RPGGTNNVMA MNGRVGASHL SQDPTATSHQ QQDIGNRLLE RIGAVNSFNN LQFDWKSFP
001: MVPSEPPNPV GGGENVPPSI LGGQGGAPLP SQPAFPSLVS PRTQFGNNMS MSMLGNAPNI SSLLNNQSFV NGIPGSMISM DTSGAESDPM SNVGFSGLSS
101: FNASSMVSPR SSGQVQGQQF SNVSANQLLA EQQRNKKMET QSFQHGQQQS MQQQFSTVRG GGLAGVGPVK MEPGQVSNDQ QHGQVQQQQQ KMLRNLGSVK
201: LEPQQIQAMR NLAQVKMEPQ HSEQSLFLQQ QQRQQQQQQQ QQFLQMPGQS PQAQMNIFQQ QRLMQLQQQQ LLKSMPQQRP QLPQQFQQQN LPLRPPLKPV
301: YEPGMGAQRL TQYMYRQQHR PEDNNIEFWR KFVAEYFAPN AKKRWCVSMY GSGRQTTGVF PQDVWHCEIC NRKPGRGFEA TAEVLPRLFK IKYESGTLEE
401: LLYVDMPRES QNSSGQIVLE YAKATQESVF EHLRVVRDGQ LRIVFSPDLK IFSWEFCARR HEELIPRRLL IPQVSQLGSA AQKYQQAAQN ATTDSALPEL
501: QNNCNMFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSRETRTGPI ESLAKFPRRT GPSSALPGPS PQQASDQLRQ QQQQQQQQQQ
601: QQQQQQQQQQ QQQTVSQNTN SDQSSRQVAL MQGNPSNGVN YAFNAASAST STSSIAGLIH QNSMKGRHQN AAYNPPNSPY GGNSVQMQSP SSSGTMVPSS
701: SQQQHNLPTF QSPTSSSNNN NPSQNGIPSV NHMGSTNSPA MQQAGEVDGN ESSSVQKILN EILMNNQAHN NSSGGSMVGH GSFGNDGKGQ ANVNSSGVLL
801: MNGQVNNNNN TNIGGAGGFG GGIGQSMAAN GINNINGNNS LMNGRVGMMV RDPNGQQDLG NQLLGAVNGF NNFDWNA
101: FNASSMVSPR SSGQVQGQQF SNVSANQLLA EQQRNKKMET QSFQHGQQQS MQQQFSTVRG GGLAGVGPVK MEPGQVSNDQ QHGQVQQQQQ KMLRNLGSVK
201: LEPQQIQAMR NLAQVKMEPQ HSEQSLFLQQ QQRQQQQQQQ QQFLQMPGQS PQAQMNIFQQ QRLMQLQQQQ LLKSMPQQRP QLPQQFQQQN LPLRPPLKPV
301: YEPGMGAQRL TQYMYRQQHR PEDNNIEFWR KFVAEYFAPN AKKRWCVSMY GSGRQTTGVF PQDVWHCEIC NRKPGRGFEA TAEVLPRLFK IKYESGTLEE
401: LLYVDMPRES QNSSGQIVLE YAKATQESVF EHLRVVRDGQ LRIVFSPDLK IFSWEFCARR HEELIPRRLL IPQVSQLGSA AQKYQQAAQN ATTDSALPEL
501: QNNCNMFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSRETRTGPI ESLAKFPRRT GPSSALPGPS PQQASDQLRQ QQQQQQQQQQ
601: QQQQQQQQQQ QQQTVSQNTN SDQSSRQVAL MQGNPSNGVN YAFNAASAST STSSIAGLIH QNSMKGRHQN AAYNPPNSPY GGNSVQMQSP SSSGTMVPSS
701: SQQQHNLPTF QSPTSSSNNN NPSQNGIPSV NHMGSTNSPA MQQAGEVDGN ESSSVQKILN EILMNNQAHN NSSGGSMVGH GSFGNDGKGQ ANVNSSGVLL
801: MNGQVNNNNN TNIGGAGGFG GGIGQSMAAN GINNINGNNS LMNGRVGMMV RDPNGQQDLG NQLLGAVNGF NNFDWNA
Arabidopsis Description
SEUTranscriptional corepressor SEUSS [Source:UniProtKB/Swiss-Prot;Acc:Q8W234]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.