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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 5
  • nucleus 3
  • cytosol 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P20700_001 Banana plastid 66.44 68.14
GSMUA_Achr3P02850_001 Banana nucleus 66.67 65.4
CDY67669 Canola mitochondrion, nucleus 17.29 63.87
GSMUA_Achr6P18610_001 Banana plastid 55.97 56.16
VIT_18s0001g15320.t01 Wine grape nucleus, plastid 57.91 55.75
KRH64564 Soybean nucleus, plastid 56.2 54.23
KRH18102 Soybean plastid 55.52 52.59
KRH15928 Soybean nucleus, plastid 54.61 52.46
KRH53367 Soybean nucleus 56.31 51.51
Solyc06g059750.2.1 Tomato nucleus, plastid 48.58 50.95
Solyc06g059760.2.1 Tomato nucleus, plastid 51.99 50.89
CDY40943 Canola nucleus, plastid 43.8 49.74
CDY14963 Canola nucleus, plastid 41.3 49.19
Bra036931.1-P Field mustard nucleus, plastid 41.3 48.92
Bra032192.1-P Field mustard nucleus, plastid 41.98 47.67
VIT_04s0044g01260.t01 Wine grape plastid 46.87 47.25
AT1G43850.1 Thale cress nucleus, plastid 46.42 46.52
GSMUA_Achr5P25900_001 Banana nucleus 42.32 38.75
CDY70167 Canola cytosol, mitochondrion, nucleus 12.17 37.68
GSMUA_Achr10P... Banana nucleus 25.6 29.03
GSMUA_Achr1P07930_001 Banana nucleus 26.05 28.84
GSMUA_Achr1P16220_001 Banana nucleus 22.87 28.76
GSMUA_Achr2P03310_001 Banana nucleus 24.91 27.14
GSMUA_Achr7P05870_001 Banana nucleus 8.19 25.17
CDY69476 Canola nucleus 7.51 24.18
PGSC0003DMT400092079 Potato nucleus 17.63 20.97
Protein Annotations
EnsemblPlants:GSMUA_Achr10P16120_001EnsemblPlants:GSMUA_Achr10T16120_001EnsemblPlantsGene:GSMUA_Achr10G16120_001InterPro:LIM-bd/SEUSSncoils:CoilPANTHER:PTHR10378
PANTHER:PTHR10378:SF17PFAM:PF01803SEG:segUniParc:UPI0002969B60UniProt:M0RIN7MapMan:35.1
Description
Transcriptional corepressor SEUSS [Source:GMGC_GENE;Acc:GSMUA_Achr10G16120_001]
Coordinates
chr10:-:23773099..23780420
Molecular Weight (calculated)
95416.3 Da
IEP (calculated)
8.537
GRAVY (calculated)
-0.544
Length
879 amino acids
Sequence
(BLAST)
001: MVPSGSSTPI GGAQSVTPSL LRSNSGLLGG SQPGLIPSPP PFSSLVSPRT QYSNSGSLLG NMSNVPPLNN SYGNGGPVGG LSGSPMNLQQ HGSLVGVADM
101: VGSAEPNPLL FTSSSGQSQG QQQCFQNPSS SQHGPDQPQS QIDAMQNLQQ QFSVPQSQQL PLRGGLGSAG RLGPVKLEPQ MGPSDQISPP QQLQTLHSIG
201: MVKVDPQQLQ SFRSLGPVKM ESHHSDPSLF LQQQQQQQQQ QQQQQILQLS RQNSQAAAAQ MSLLQQQRML QFQQQQQQQQ IVKTLPQQRG QLRQQQLLQH
301: NLPVRPPMRS TVYEPGMCAR RLTQYMYHQQ HRPQDNNIEF WRKFIAEYFA PSAKKRWCVS LYGSGRQTTG VLPQDVWHCE ICNHKPGRGF ETTVEVLPRL
401: FQIKYASGTL EELLYVDMPR EYQNASGQIV LDYAKAIQES VFEQLRVVRD GQLRIVFNPD LKISSWEFCA RRHEELIPRR VIIPQVSQLG AMVQRYQAAA
501: QNASLPTQDL QNTCNSFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSKETRSGPI DSLNNFPRRT SCSSGLQTQQ PQQPEQQQPI
601: TQNPNHNDQN SAHATGIQLS AGSSNVVSIN NSLNAASSTS TSAATIIGLL HQNSINTRQE NQMNTVNSPY GGGNAVQIPS ASSSNTLAPS QPNPPSPFSS
701: LAPASNNNPT TTSHNAAHLS SINSPASLST MQQPASQVHE TDPNDSQSSV HQILHELMMS SQLNGVNSLG NDMKPINGIT PALSVENCLV GHGLSNNSAI
801: SGAGFSGMGG IGLSAAASGM RPGGTNNVMA MNGRVGASHL SQDPTATSHQ QQDIGNRLLE RIGAVNSFNN LQFDWKSFP
Best Arabidopsis Sequence Match ( AT1G43850.1 )
(BLAST)
001: MVPSEPPNPV GGGENVPPSI LGGQGGAPLP SQPAFPSLVS PRTQFGNNMS MSMLGNAPNI SSLLNNQSFV NGIPGSMISM DTSGAESDPM SNVGFSGLSS
101: FNASSMVSPR SSGQVQGQQF SNVSANQLLA EQQRNKKMET QSFQHGQQQS MQQQFSTVRG GGLAGVGPVK MEPGQVSNDQ QHGQVQQQQQ KMLRNLGSVK
201: LEPQQIQAMR NLAQVKMEPQ HSEQSLFLQQ QQRQQQQQQQ QQFLQMPGQS PQAQMNIFQQ QRLMQLQQQQ LLKSMPQQRP QLPQQFQQQN LPLRPPLKPV
301: YEPGMGAQRL TQYMYRQQHR PEDNNIEFWR KFVAEYFAPN AKKRWCVSMY GSGRQTTGVF PQDVWHCEIC NRKPGRGFEA TAEVLPRLFK IKYESGTLEE
401: LLYVDMPRES QNSSGQIVLE YAKATQESVF EHLRVVRDGQ LRIVFSPDLK IFSWEFCARR HEELIPRRLL IPQVSQLGSA AQKYQQAAQN ATTDSALPEL
501: QNNCNMFVAS ARQLAKALEV PLVNDLGYTK RYVRCLQISE VVNSMKDLID YSRETRTGPI ESLAKFPRRT GPSSALPGPS PQQASDQLRQ QQQQQQQQQQ
601: QQQQQQQQQQ QQQTVSQNTN SDQSSRQVAL MQGNPSNGVN YAFNAASAST STSSIAGLIH QNSMKGRHQN AAYNPPNSPY GGNSVQMQSP SSSGTMVPSS
701: SQQQHNLPTF QSPTSSSNNN NPSQNGIPSV NHMGSTNSPA MQQAGEVDGN ESSSVQKILN EILMNNQAHN NSSGGSMVGH GSFGNDGKGQ ANVNSSGVLL
801: MNGQVNNNNN TNIGGAGGFG GGIGQSMAAN GINNINGNNS LMNGRVGMMV RDPNGQQDLG NQLLGAVNGF NNFDWNA
Arabidopsis Description
SEUTranscriptional corepressor SEUSS [Source:UniProtKB/Swiss-Prot;Acc:Q8W234]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.