Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42841 | Canola | nucleus | 93.8 | 94.58 |
| Bra029347.1-P | Field mustard | nucleus | 93.8 | 94.58 |
| CDY47002 | Canola | nucleus | 92.98 | 93.36 |
| CDY16832 | Canola | nucleus | 92.56 | 92.95 |
| Bra035952.1-P | Field mustard | nucleus | 92.56 | 92.95 |
| CDY58690 | Canola | nucleus | 92.15 | 92.53 |
| CDY02185 | Canola | nucleus | 92.15 | 92.53 |
| Bra012997.1-P | Field mustard | nucleus | 91.74 | 92.12 |
| KRH03173 | Soybean | nucleus | 63.64 | 64.44 |
| Solyc06g069430.2.1 | Tomato | nucleus | 64.46 | 63.67 |
| Solyc03g114830.2.1 | Tomato | nucleus | 64.05 | 62.75 |
| KRH56774 | Soybean | nucleus | 63.22 | 62.7 |
| PGSC0003DMT400063313 | Potato | nucleus | 63.22 | 61.69 |
| PGSC0003DMT400010451 | Potato | nucleus | 62.81 | 60.8 |
| VIT_17s0000g04990.t01 | Wine grape | nucleus | 60.74 | 60.49 |
| GSMUA_Achr2P13650_001 | Banana | nucleus | 55.37 | 54.47 |
| GSMUA_Achr6P00050_001 | Banana | nucleus | 52.89 | 52.89 |
| TraesCS5A01G391700.1 | Wheat | nucleus | 53.31 | 52.87 |
| EER90862 | Sorghum | nucleus | 52.89 | 52.24 |
| GSMUA_Achr4P23540_001 | Banana | nucleus | 53.31 | 52.02 |
| Os03t0752800-02 | Rice | nucleus | 52.48 | 51.63 |
| AT1G69120.1 | Thale cress | nucleus | 54.55 | 51.56 |
| GSMUA_Achr8P04330_001 | Banana | nucleus | 52.07 | 51.43 |
| TraesCS5B01G396600.2 | Wheat | nucleus | 53.31 | 51.39 |
| GSMUA_Achr7P00460_001 | Banana | nucleus | 52.89 | 51.2 |
| TraesCS5D01G401500.1 | Wheat | cytosol, nucleus | 53.31 | 50.79 |
| EER97510 | Sorghum | nucleus | 51.65 | 49.41 |
| Os07t0108900-02 | Rice | nucleus | 54.13 | 49.06 |
| Zm00001d022088_P004 | Maize | nucleus | 52.07 | 48.84 |
| GSMUA_Achr10P... | Banana | nucleus | 57.44 | 48.77 |
| GSMUA_Achr3P30440_001 | Banana | nucleus | 46.28 | 48.7 |
| TraesCS2D01G262700.1 | Wheat | nucleus | 54.13 | 48.34 |
| EER95753 | Sorghum | nucleus | 53.72 | 48.15 |
| TraesCS2A01G261200.2 | Wheat | nucleus | 54.13 | 47.81 |
| TraesCS2B01G281000.1 | Wheat | nucleus | 54.13 | 47.81 |
| Os07t0605200-01 | Rice | nucleus | 49.17 | 47.79 |
| Zm00001d018667_P003 | Maize | nucleus | 52.89 | 47.23 |
| AT1G26310.1 | Thale cress | nucleus | 49.59 | 47.06 |
| TraesCS2A01G174300.3 | Wheat | nucleus | 51.65 | 46.82 |
| GSMUA_Achr3P02280_001 | Banana | nucleus | 50.83 | 46.77 |
| GSMUA_Achr3P25280_001 | Banana | nucleus | 51.24 | 46.62 |
| TraesCS2D01G181400.3 | Wheat | nucleus | 50.83 | 46.07 |
| TraesCS2B01G200800.1 | Wheat | nucleus | 50.83 | 46.07 |
| AT3G30260.1 | Thale cress | nucleus | 47.11 | 45.78 |
| Zm00001d013259_P002 | Maize | nucleus | 52.07 | 45.16 |
| Zm00001d034045_P003 | Maize | nucleus | 51.65 | 42.96 |
| Zm00001d007949_P001 | Maize | nucleus | 53.72 | 42.62 |
| HORVU2Hr1G063800.7 | Barley | nucleus, plastid | 53.72 | 42.48 |
| HORVU5Hr1G095630.3 | Barley | nucleus, plastid | 52.48 | 41.37 |
| Os12t0501700-00 | Rice | nucleus | 39.26 | 40.77 |
| AT2G45650.1 | Thale cress | nucleus | 41.74 | 40.08 |
| AT3G02310.1 | Thale cress | nucleus | 41.32 | 40.0 |
| AT1G24260.2 | Thale cress | nucleus | 38.84 | 37.45 |
| AT5G15800.2 | Thale cress | nucleus | 40.5 | 37.4 |
| KXG23502 | Sorghum | nucleus | 33.88 | 36.77 |
| AT3G61120.1 | Thale cress | nucleus | 36.78 | 36.48 |
| Zm00001d023736_P001 | Maize | nucleus | 36.36 | 34.24 |
| AT2G03710.1 | Thale cress | nucleus | 36.36 | 34.11 |
| AT2G14210.2 | Thale cress | nucleus | 33.06 | 34.04 |
| AT4G18960.1 | Thale cress | nucleus | 35.12 | 33.73 |
| AT4G37940.1 | Thale cress | nucleus | 30.17 | 32.02 |
| AT2G42830.2 | Thale cress | nucleus | 32.64 | 31.85 |
| AT3G57230.1 | Thale cress | nucleus | 31.41 | 31.67 |
| AT2G22630.2 | Thale cress | nucleus | 27.69 | 29.52 |
| AT3G58780.4 | Thale cress | nucleus | 32.23 | 27.76 |
| AT4G09960.4 | Thale cress | nucleus | 34.3 | 25.23 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:836212 | UniProt:A0A178UM96 | ProteinID:AED97395.1 | EMBL:AF386929 |
| Symbol:AGL8 | ArrayExpress:AT5G60910 | EnsemblPlantsGene:AT5G60910 | RefSeq:AT5G60910 | TAIR:AT5G60910 | RefSeq:AT5G60910-TAIR-G |
| EnsemblPlants:AT5G60910.1 | TAIR:AT5G60910.1 | EMBL:AY072463 | ProteinID:BAB10640.1 | ncoils:Coil | GO:GO:0000003 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009653 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009911 | GO:GO:0009987 | GO:GO:0010077 |
| GO:GO:0010154 | GO:GO:0030154 | GO:GO:0040007 | GO:GO:0043565 | GO:GO:0045944 | GO:GO:0046983 |
| GO:GO:0060560 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | RefSeq:NP_568929.1 |
| ProteinID:OAO94650.1 | PFAM:PF00319 | PFAM:PF01486 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005022 | PO:PO:0007064 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020148 |
| PO:PO:0025022 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF155 | UniProt:Q38876 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | EMBL:U33473 | UniParc:UPI00001256CA | : | : | : |
Description
AGL8Agamous-like MADS-box protein AGL8 [Source:UniProtKB/Swiss-Prot;Acc:Q38876]
Coordinates
chr5:-:24502434..24506269
Molecular Weight (calculated)
27538.0 Da
IEP (calculated)
9.858
GRAVY (calculated)
-0.669
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFSS KGKLFEYSTD SCMERILERY DRYLYSDKQL VGRDVSQSEN WVLEHAKLKA
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE
101: RVEVLEKNKR NFMGEDLDSL SLKELQSLEH QLDAAIKSIR SRKNQAMFES ISALQKKDKA LQDHNNSLLK KIKEREKKTG QQEGQLVQCS NSSSVLLPQY
201: CVTSSRDGFV ERVGGENGGA SSLTEPNSLL PAWMLRPTTT NE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.